RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 CAMSAP1Q5T5Y3 1602 aa25.64■■□□□ 1.7
COLCA2-207ENST00000639470 PPP6R1Q9UPN7 881 aa25.64■■□□□ 1.7
COLCA2-207ENST00000639470 NCKAP5LQ9HCH0 1330 aa25.63■■□□□ 1.69
COLCA2-207ENST00000639470 WASHC2CQ9Y4E1 1318 aa25.63■■□□□ 1.69
COLCA2-207ENST00000639470 CERKQ8TCT0 537 aa25.62■■□□□ 1.69
COLCA2-207ENST00000639470 CEP170BQ9Y4F5 1589 aaPredicted RBP25.61■■□□□ 1.69
COLCA2-207ENST00000639470 RRP7BPQ9NSQ0 103 aa25.6■■□□□ 1.69
COLCA2-207ENST00000639470 DAPK1P53355 1430 aa25.6■■□□□ 1.69
COLCA2-207ENST00000639470 CHIC2Q9UKJ5 165 aa25.59■■□□□ 1.69
COLCA2-207ENST00000639470 TCOF1Q13428 1488 aaKnown RBP25.59■■□□□ 1.69
COLCA2-207ENST00000639470 MROH1Q8NDA8 1641 aa25.58■■□□□ 1.69
COLCA2-207ENST00000639470 PZPP20742 1482 aa25.58■■□□□ 1.69
COLCA2-207ENST00000639470 TNRQ92752 1358 aa25.57■■□□□ 1.68
COLCA2-207ENST00000639470 KIF15Q9NS87 1388 aa25.57■■□□□ 1.68
COLCA2-207ENST00000639470 PTPRTO14522 1441 aa25.57■■□□□ 1.68
COLCA2-207ENST00000639470 RNF17Q9BXT8 1623 aaKnown RBP25.56■■□□□ 1.68
COLCA2-207ENST00000639470 ZNF142P52746 1687 aaPredicted RBP25.56■■□□□ 1.68
COLCA2-207ENST00000639470 DMRT2Q9Y5R5 561 aa25.56■■□□□ 1.68
COLCA2-207ENST00000639470 CROCC2H7BZ55 1655 aa25.55■■□□□ 1.68
COLCA2-207ENST00000639470 ABCC3O15438 1527 aa25.55■■□□□ 1.68
COLCA2-207ENST00000639470 PPARGC1BQ86YN6 1023 aaKnown RBP25.54■■□□□ 1.68
COLCA2-207ENST00000639470 SHANK2Q9UPX8 1470 aa25.53■■□□□ 1.68
COLCA2-207ENST00000639470 DNMT1P26358 1616 aaKnown RBP25.53■■□□□ 1.68
COLCA2-207ENST00000639470 A2ML1A8K2U0 1454 aa25.53■■□□□ 1.68
COLCA2-207ENST00000639470 DUOX2Q9NRD8 1548 aa25.53■■□□□ 1.68
COLCA2-207ENST00000639470 FAM50AQ14320 339 aaKnown RBP25.51■■□□□ 1.67
COLCA2-207ENST00000639470 EIF2AK4Q9P2K8 1649 aaKnown RBP25.49■■□□□ 1.67
COLCA2-207ENST00000639470 FAM135AQ9P2D6 1515 aa25.49■■□□□ 1.67
COLCA2-207ENST00000639470 PLA2R1Q13018 1463 aa25.47■■□□□ 1.67
COLCA2-207ENST00000639470 ZNF335Q9H4Z2 1342 aaPredicted RBP25.47■■□□□ 1.67
COLCA2-207ENST00000639470 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.47■■□□□ 1.672e-6■□□□□ 10.7
COLCA2-207ENST00000639470 LTBP4Q8N2S1 1624 aa25.47■■□□□ 1.67
COLCA2-207ENST00000639470 CEP152O94986 1710 aa25.46■■□□□ 1.67
COLCA2-207ENST00000639470 ERBINQ96RT1 1412 aa25.44■■□□□ 1.66
COLCA2-207ENST00000639470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.44■■□□□ 1.663e-8■■□□□ 13.3
COLCA2-207ENST00000639470 ERVK-7P63135 1459 aa25.43■■□□□ 1.66
COLCA2-207ENST00000639470 PKD2Q13563 968 aa25.41■■□□□ 1.66
COLCA2-207ENST00000639470 PRDM15P57071 1507 aaPredicted RBP25.41■■□□□ 1.66
COLCA2-207ENST00000639470 ANKRD30AQ9BXX3 1397 aa25.41■■□□□ 1.66
COLCA2-207ENST00000639470 ZC3H13Q5T200 1668 aaKnown RBP25.4■■□□□ 1.66
COLCA2-207ENST00000639470 SPATA31D1Q6ZQQ2 1576 aa25.39■■□□□ 1.66
COLCA2-207ENST00000639470 NEURL4Q96JN8 1562 aa25.39■■□□□ 1.65
COLCA2-207ENST00000639470 UGGT1Q9NYU2 1555 aa25.37■■□□□ 1.65
COLCA2-207ENST00000639470 NLRP1Q9C000 1473 aa25.37■■□□□ 1.65
COLCA2-207ENST00000639470 ADGRL2O95490 1459 aa25.35■■□□□ 1.65
COLCA2-207ENST00000639470 DEPDC5O75140 1603 aa25.34■■□□□ 1.65
COLCA2-207ENST00000639470 CFAP65Q6ZU64 1925 aaKnown RBP25.31■■□□□ 1.64
COLCA2-207ENST00000639470 THEMISQ8N1K5 641 aaPredicted RBP25.3■■□□□ 1.64
COLCA2-207ENST00000639470 ITGAEP38570 1179 aa25.29■■□□□ 1.64
COLCA2-207ENST00000639470 ANKLE2Q86XL3 938 aa25.29■■□□□ 1.64
COLCA2-207ENST00000639470 ARHGAP31Q2M1Z3 1444 aa25.29■■□□□ 1.64
COLCA2-207ENST00000639470 VWDEQ8N2E2 1590 aa25.28■■□□□ 1.64
COLCA2-207ENST00000639470 POLR1AO95602 1720 aaPredicted RBP25.28■■□□□ 1.64
COLCA2-207ENST00000639470 KANK1Q14678 1352 aa25.27■■□□□ 1.64
COLCA2-207ENST00000639470 ANKRD50Q9ULJ7 1429 aa25.27■■□□□ 1.64
COLCA2-207ENST00000639470 NPHP4O75161 1426 aaPredicted RBP25.25■■□□□ 1.63
COLCA2-207ENST00000639470 LMTK2Q8IWU2 1503 aa25.23■■□□□ 1.63
COLCA2-207ENST00000639470 UBR1Q8IWV7 1749 aa25.22■■□□□ 1.63
COLCA2-207ENST00000639470 LTKP29376 864 aa25.21■■□□□ 1.63
COLCA2-207ENST00000639470 SYNMO15061 1565 aa25.2■■□□□ 1.62
COLCA2-207ENST00000639470 MED14O60244 1454 aa25.2■■□□□ 1.62
COLCA2-207ENST00000639470 EFCAB6Q5THR3 1501 aa25.19■■□□□ 1.62
COLCA2-207ENST00000639470 PIK3C2BO00750 1634 aa25.19■■□□□ 1.62
COLCA2-207ENST00000639470 IDI1Q13907 227 aa25.18■■□□□ 1.62
COLCA2-207ENST00000639470 IQSEC2Q5JU85 1478 aa25.17■■□□□ 1.62
COLCA2-207ENST00000639470 UBAP1LF5GYI3 381 aa25.16■■□□□ 1.62
COLCA2-207ENST00000639470 ARHGAP23Q9P227 1491 aa25.15■■□□□ 1.62
COLCA2-207ENST00000639470 NOS1P29475 1434 aa25.15■■□□□ 1.62
COLCA2-207ENST00000639470 SCAF11Q99590 1463 aaKnown RBP25.15■■□□□ 1.62
COLCA2-207ENST00000639470 IQGAP1P46940 1657 aa25.14■■□□□ 1.62
COLCA2-207ENST00000639470 TXNDC2Q86VQ3 553 aa25.14■■□□□ 1.62
COLCA2-207ENST00000639470 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
COLCA2-207ENST00000639470 ROCK1Q13464 1354 aa25.13■■□□□ 1.61
COLCA2-207ENST00000639470 SLIT1O75093 1534 aa25.12■■□□□ 1.61
COLCA2-207ENST00000639470 STAG3Q9UJ98 1225 aa25.11■■□□□ 1.61
COLCA2-207ENST00000639470 TMEM2Q9UHN6 1383 aa25.1■■□□□ 1.61
COLCA2-207ENST00000639470 UNC13BO14795 1591 aa25.1■■□□□ 1.61
COLCA2-207ENST00000639470 STRCP1A6NGW2 1772 aa25.09■■□□□ 1.61
COLCA2-207ENST00000639470 CPS1P31327 1500 aa25.07■■□□□ 1.6
COLCA2-207ENST00000639470 TET3O43151 1660 aa25.05■■□□□ 1.6
COLCA2-207ENST00000639470 RRBP1Q9P2E9 1410 aaKnown RBP25.04■■□□□ 1.6
COLCA2-207ENST00000639470 ADGRB3O60242 1522 aa25.04■■□□□ 1.6
COLCA2-207ENST00000639470 PIP4K2BP78356 416 aa25.03■■□□□ 1.6
COLCA2-207ENST00000639470 NUP155O75694 1391 aa25.03■■□□□ 1.6
COLCA2-207ENST00000639470 EID1Q9Y6B2 187 aa25.02■■□□□ 1.6
COLCA2-207ENST00000639470 SCAF1Q9H7N4 1312 aaKnown RBP25.02■■□□□ 1.6
COLCA2-207ENST00000639470 RPRD2Q5VT52 1461 aaKnown RBP25.02■■□□□ 1.6
COLCA2-207ENST00000639470 LRRC7Q96NW7 1537 aa25.02■■□□□ 1.6
COLCA2-207ENST00000639470 ALKQ9UM73 1620 aa25.01■■□□□ 1.59
COLCA2-207ENST00000639470 E9PCH4 1651 aa25.01■■□□□ 1.59
COLCA2-207ENST00000639470 SLC26A8Q96RN1 970 aa25■■□□□ 1.59
COLCA2-207ENST00000639470 IQGAP3Q86VI3 1631 aa24.98■■□□□ 1.59
COLCA2-207ENST00000639470 SLC52A1Q9NWF4 448 aa24.98■■□□□ 1.59
COLCA2-207ENST00000639470 GCC2Q8IWJ2 1684 aa24.97■■□□□ 1.59
COLCA2-207ENST00000639470 CHGAP10645 457 aaKnown RBP24.96■■□□□ 1.59
COLCA2-207ENST00000639470 NUTM2DQ5VT03 806 aaPredicted RBP24.96■■□□□ 1.59
COLCA2-207ENST00000639470 RBM33Q96EV2 1170 aaKnown RBP24.95■■□□□ 1.58
COLCA2-207ENST00000639470 KDM5AP29375 1690 aaKnown RBP24.94■■□□□ 1.58
COLCA2-207ENST00000639470 ZFYVE9O95405 1425 aa24.94■■□□□ 1.58
COLCA2-207ENST00000639470 HSPA1LP34931 641 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms