RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 NISCHQ9Y2I1 1504 aa40.68■■■■■ 4.1
COLCA2-207ENST00000639470 CCDC180Q9P1Z9 1646 aa36.22■■■■□ 3.39
COLCA2-207ENST00000639470 ABCC9O60706 1549 aa36.2■■■■□ 3.39
COLCA2-207ENST00000639470 RB1CC1Q8TDY2 1594 aa34.38■■■■□ 3.09
COLCA2-207ENST00000639470 DCAF8L2P0C7V8 631 aa34.34■■■■□ 3.09
COLCA2-207ENST00000639470 NACADO15069 1562 aa34.2■■■■□ 3.07
COLCA2-207ENST00000639470 PABPN1Q86U42 306 aaKnown RBP eCLIP33.82■■■■□ 3
COLCA2-207ENST00000639470 ZCCHC6Q5VYS8 1495 aaKnown RBP33.8■■■■□ 3
COLCA2-207ENST00000639470 DNAJC5BQ9UF47 199 aa33.78■■■■□ 3
COLCA2-207ENST00000639470 MYO15BQ96JP2 1530 aa33.77■■■■□ 3
COLCA2-207ENST00000639470 UNC13AQ9UPW8 1703 aa33.65■■■□□ 2.98
COLCA2-207ENST00000639470 BICRAQ9NZM4 1560 aa33.51■■■□□ 2.96
COLCA2-207ENST00000639470 DCAF1Q9Y4B6 1507 aa33.49■■■□□ 2.95
COLCA2-207ENST00000639470 SCRIBQ14160 1630 aa33.25■■■□□ 2.91
COLCA2-207ENST00000639470 SHROOM4Q9ULL8 1493 aa32.83■■■□□ 2.85
COLCA2-207ENST00000639470 CC2D2AQ9P2K1 1620 aa32.62■■■□□ 2.81
COLCA2-207ENST00000639470 EIF4G1Q04637 1599 aaKnown RBP32.61■■■□□ 2.81
COLCA2-207ENST00000639470 CECR2Q9BXF3 1484 aa32.49■■■□□ 2.79
COLCA2-207ENST00000639470 SMARCA4P51532 1647 aa31.66■■■□□ 2.66
COLCA2-207ENST00000639470 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
COLCA2-207ENST00000639470 NCAPD3P42695 1498 aa31.64■■■□□ 2.66
COLCA2-207ENST00000639470 BAZ1AQ9NRL2 1556 aaPredicted RBP31.49■■■□□ 2.63
COLCA2-207ENST00000639470 SMARCA2P51531 1590 aa31.47■■■□□ 2.63
COLCA2-207ENST00000639470 MROH2BQ7Z745 1585 aa31.46■■■□□ 2.63
COLCA2-207ENST00000639470 HMGXB3Q12766 1538 aa31.39■■■□□ 2.62
COLCA2-207ENST00000639470 BAZ1BQ9UIG0 1483 aaKnown RBP31.33■■■□□ 2.61
COLCA2-207ENST00000639470 PEG3Q9GZU2 1588 aa31.28■■■□□ 2.6
COLCA2-207ENST00000639470 NESP48681 1621 aa31.22■■■□□ 2.59
COLCA2-207ENST00000639470 ERCC6Q03468 1493 aa31.12■■■□□ 2.57
COLCA2-207ENST00000639470 WIZO95785 1651 aa31.06■■■□□ 2.56
COLCA2-207ENST00000639470 RSF1Q96T23 1441 aaPredicted RBP30.9■■■□□ 2.54
COLCA2-207ENST00000639470 CUX2O14529 1486 aa30.88■■■□□ 2.53
COLCA2-207ENST00000639470 LAMC3Q9Y6N6 1575 aa30.82■■■□□ 2.52
COLCA2-207ENST00000639470 CADPSQ9ULU8 1353 aa30.72■■■□□ 2.51
COLCA2-207ENST00000639470 THOC2Q8NI27 1593 aaKnown RBP30.71■■■□□ 2.51
COLCA2-207ENST00000639470 KIF21AQ7Z4S6 1674 aa30.69■■■□□ 2.5
COLCA2-207ENST00000639470 PDS5BQ9NTI5 1447 aa30.64■■■□□ 2.5
COLCA2-207ENST00000639470 TOP2AP11388 1531 aaKnown RBP30.62■■■□□ 2.49
COLCA2-207ENST00000639470 DNAJC5Q9H3Z4 198 aa30.6■■■□□ 2.49
COLCA2-207ENST00000639470 MRC2Q9UBG0 1479 aa30.44■■■□□ 2.46
COLCA2-207ENST00000639470 CFTRP13569 1480 aa30.43■■■□□ 2.46
COLCA2-207ENST00000639470 FANCD2Q9BXW9 1451 aa30.4■■■□□ 2.46
COLCA2-207ENST00000639470 CEP164Q9UPV0 1460 aa30.37■■■□□ 2.45
COLCA2-207ENST00000639470 CCDC88BA6NC98 1476 aa30.34■■■□□ 2.45
COLCA2-207ENST00000639470 WDR62O43379 1518 aa30.33■■■□□ 2.45
COLCA2-207ENST00000639470 URB2Q14146 1524 aaKnown RBP30.19■■■□□ 2.42
COLCA2-207ENST00000639470 PRDM2Q13029 1718 aa29.99■■■□□ 2.39
COLCA2-207ENST00000639470 TOPBP1Q92547 1522 aa29.86■■■□□ 2.37
COLCA2-207ENST00000639470 SUPT5HO00267 1087 aaKnown RBP29.85■■■□□ 2.37
COLCA2-207ENST00000639470 ZNF608Q9ULD9 1512 aaPredicted RBP29.81■■■□□ 2.36
COLCA2-207ENST00000639470 DNMBPQ6XZF7 1577 aa29.73■■■□□ 2.35
COLCA2-207ENST00000639470 IFT140Q96RY7 1462 aa29.72■■■□□ 2.35
COLCA2-207ENST00000639470 ABCC8Q09428 1581 aa29.63■■■□□ 2.33
COLCA2-207ENST00000639470 POLA1P09884 1462 aaPredicted RBP29.6■■■□□ 2.33
COLCA2-207ENST00000639470 RAD54L2Q9Y4B4 1467 aa29.56■■■□□ 2.32
COLCA2-207ENST00000639470 OSCARQ8IYS5 282 aa29.56■■■□□ 2.32
COLCA2-207ENST00000639470 TARBP1Q13395 1621 aaKnown RBP29.56■■■□□ 2.32
COLCA2-207ENST00000639470 EIF4G3O43432 1585 aaKnown RBP29.56■■■□□ 2.32
COLCA2-207ENST00000639470 AQRO60306 1485 aaKnown RBP eCLIP29.55■■■□□ 2.32
COLCA2-207ENST00000639470 TRIM41Q8WV44 630 aa29.52■■■□□ 2.32
COLCA2-207ENST00000639470 CUX1P39880 1505 aa29.51■■■□□ 2.32
COLCA2-207ENST00000639470 FGD5Q6ZNL6 1462 aa29.47■■■□□ 2.31
COLCA2-207ENST00000639470 SOGA1O94964 1423 aa29.45■■■□□ 2.3
COLCA2-207ENST00000639470 TDRD9Q8NDG6 1382 aaKnown RBP29.44■■■□□ 2.3
COLCA2-207ENST00000639470 FBLN2P98095 1184 aa29.29■■■□□ 2.28
COLCA2-207ENST00000639470 CHD1O14646 1710 aa29.25■■■□□ 2.27
COLCA2-207ENST00000639470 SNAPC4Q5SXM2 1469 aa29.23■■■□□ 2.27
COLCA2-207ENST00000639470 RIMBP3CA6NJZ7 1639 aa29.2■■■□□ 2.27
COLCA2-207ENST00000639470 RIMBP3BA6NNM3 1639 aa29.2■■■□□ 2.27
COLCA2-207ENST00000639470 RIMBP3Q9UFD9 1639 aa29.2■■■□□ 2.27
COLCA2-207ENST00000639470 WDR97A6NE52 1622 aa29.16■■■□□ 2.26
COLCA2-207ENST00000639470 ARHGEF11O15085 1522 aa29.15■■■□□ 2.26
COLCA2-207ENST00000639470 GRIN2BQ13224 1484 aa29.11■■■□□ 2.25
COLCA2-207ENST00000639470 SYNJ1O43426 1573 aa29.1■■■□□ 2.25
COLCA2-207ENST00000639470 WRNQ14191 1432 aaPredicted RBP eCLIP29.09■■■□□ 2.25
COLCA2-207ENST00000639470 GAPVD1Q14C86 1478 aa29.08■■■□□ 2.25
COLCA2-207ENST00000639470 ABCA10Q8WWZ4 1543 aa29.08■■■□□ 2.25
COLCA2-207ENST00000639470 CHMP7Q8WUX9 453 aaPredicted RBP29.04■■■□□ 2.24
COLCA2-207ENST00000639470 MAGI1Q96QZ7 1491 aaPredicted RBP29.04■■■□□ 2.24
COLCA2-207ENST00000639470 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
COLCA2-207ENST00000639470 ABCA5Q8WWZ7 1642 aa29.02■■■□□ 2.24
COLCA2-207ENST00000639470 BIVM-ERCC5R4GMW8 1640 aa29.01■■■□□ 2.23
COLCA2-207ENST00000639470 PBRM1Q86U86 1689 aa29■■■□□ 2.23
COLCA2-207ENST00000639470 SYNJ2O15056 1496 aa28.97■■■□□ 2.23
COLCA2-207ENST00000639470 CYB5RLQ6IPT4 315 aa28.97■■■□□ 2.23
COLCA2-207ENST00000639470 CLASP1Q7Z460 1538 aa28.94■■■□□ 2.22
COLCA2-207ENST00000639470 ARAP1Q96P48 1450 aa28.94■■■□□ 2.22
COLCA2-207ENST00000639470 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
COLCA2-207ENST00000639470 GRIN2AQ12879 1464 aa28.77■■■□□ 2.2
COLCA2-207ENST00000639470 CEP170Q5SW79 1584 aa28.7■■■□□ 2.18
COLCA2-207ENST00000639470 FHAD1B1AJZ9 1412 aa28.69■■■□□ 2.18
COLCA2-207ENST00000639470 ERICH3Q5RHP9 1530 aa28.67■■■□□ 2.18
COLCA2-207ENST00000639470 NUP160Q12769 1436 aa28.66■■■□□ 2.18
COLCA2-207ENST00000639470 ERCC6L2Q5T890 1561 aa28.66■■■□□ 2.18
COLCA2-207ENST00000639470 TRHP20396 242 aaPredicted RBP28.52■■■□□ 2.16
COLCA2-207ENST00000639470 IGF1RP08069 1367 aa28.5■■■□□ 2.15
COLCA2-207ENST00000639470 KIF27Q86VH2 1401 aa28.46■■■□□ 2.15
COLCA2-207ENST00000639470 SHROOM2Q13796 1616 aa28.45■■■□□ 2.14
COLCA2-207ENST00000639470 PRG4Q92954 1404 aaPredicted RBP28.39■■■□□ 2.14
COLCA2-207ENST00000639470 RUSC2Q8N2Y8 1516 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms