RNA–Protein interactions for RNA: ENST00000612309.4

DDB2-206, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-206ENST00000612309 TMEM51Q9NW97 253 aa10.9□□□□□ -0.66
DDB2-206ENST00000612309 TSPOAP1O95153 1857 aa10.9□□□□□ -0.67
DDB2-206ENST00000612309 CDK13Q14004 1512 aaKnown RBP10.89□□□□□ -0.67
DDB2-206ENST00000612309 CENPJQ9HC77 1338 aaPredicted RBP10.89□□□□□ -0.67
DDB2-206ENST00000612309 E9PSI1 815 aa10.88□□□□□ -0.67
DDB2-206ENST00000612309 DDRGK1Q96HY6 314 aa10.88□□□□□ -0.67
DDB2-206ENST00000612309 FMN1Q68DA7 1419 aa10.88□□□□□ -0.67
DDB2-206ENST00000612309 ZNF644Q9H582 1327 aaPredicted RBP10.88□□□□□ -0.67
DDB2-206ENST00000612309 WWC1Q8IX03 1113 aa10.87□□□□□ -0.67
DDB2-206ENST00000612309 ATP10BO94823 1461 aa10.87□□□□□ -0.67
DDB2-206ENST00000612309 SAMD9Q5K651 1589 aa10.87□□□□□ -0.67
DDB2-206ENST00000612309 SIN3AQ96ST3 1273 aa10.87□□□□□ -0.67
DDB2-206ENST00000612309 RRP7BPQ9NSQ0 103 aa10.87□□□□□ -0.67
DDB2-206ENST00000612309 NUP153P49790 1475 aaKnown RBP10.86□□□□□ -0.67
DDB2-206ENST00000612309 PHLDB1Q86UU1 1377 aa10.85□□□□□ -0.67
DDB2-206ENST00000612309 PCF11O94913 1555 aaKnown RBP10.85□□□□□ -0.67
DDB2-206ENST00000612309 ZCCHC11Q5TAX3 1644 aaKnown RBP10.84□□□□□ -0.67
DDB2-206ENST00000612309 BCCIPQ9P287 314 aaKnown RBP eCLIP10.84□□□□□ -0.67
DDB2-206ENST00000612309 ABCA8O94911 1581 aa10.84□□□□□ -0.67
DDB2-206ENST00000612309 CNKSR2Q8WXI2 1034 aa10.84□□□□□ -0.67
DDB2-206ENST00000612309 RAPGEF6Q8TEU7 1601 aa10.84□□□□□ -0.67
DDB2-206ENST00000612309 EFCAB5A4FU69 1503 aa10.83□□□□□ -0.68
DDB2-206ENST00000612309 CLCN1P35523 988 aa10.83□□□□□ -0.68
DDB2-206ENST00000612309 ANP32BQ92688 251 aaKnown RBP10.83□□□□□ -0.68
DDB2-206ENST00000612309 POLR3GLQ9BT43 218 aa10.83□□□□□ -0.68
DDB2-206ENST00000612309 CHRM1P11229 460 aaPredicted RBP10.83□□□□□ -0.68
DDB2-206ENST00000612309 KDM5BQ9UGL1 1544 aa10.83□□□□□ -0.68
DDB2-206ENST00000612309 NCLP19338 710 aaKnown RBP10.82□□□□□ -0.68
DDB2-206ENST00000612309 CERS3Q8IU89 383 aa10.82□□□□□ -0.68
DDB2-206ENST00000612309 CFDP1Q9UEE9 299 aaPredicted RBP10.82□□□□□ -0.68
DDB2-206ENST00000612309 ABCC10Q5T3U5 1492 aa10.81□□□□□ -0.68
DDB2-206ENST00000612309 WDR7Q9Y4E6 1490 aa10.81□□□□□ -0.68
DDB2-206ENST00000612309 CDK11BP21127 795 aaKnown RBP10.81□□□□□ -0.68
DDB2-206ENST00000612309 RNF216Q9NWF9 866 aaPredicted RBP10.81□□□□□ -0.68
DDB2-206ENST00000612309 UHRF1BP1LA0JNW5 1464 aa10.81□□□□□ -0.68
DDB2-206ENST00000612309 SLC4A3P48751 1232 aa10.8□□□□□ -0.68
DDB2-206ENST00000612309 CASKIN1Q8WXD9 1431 aa10.8□□□□□ -0.68
DDB2-206ENST00000612309 PPP4R3BQ5MIZ7 849 aa10.8□□□□□ -0.68
DDB2-206ENST00000612309 PDE4AP27815 886 aa10.8□□□□□ -0.68
DDB2-206ENST00000612309 EPRSP07814 1512 aaKnown RBP10.79□□□□□ -0.68
DDB2-206ENST00000612309 RAPGEF3O95398 923 aa10.79□□□□□ -0.68
DDB2-206ENST00000612309 HIRIP3Q9BW71 556 aaPredicted RBP10.79□□□□□ -0.68
DDB2-206ENST00000612309 CCNB3Q8WWL7 1395 aa10.79□□□□□ -0.68
DDB2-206ENST00000612309 LRRC9Q6ZRR7 1453 aa10.79□□□□□ -0.68
DDB2-206ENST00000612309 CD109Q6YHK3 1445 aa10.79□□□□□ -0.68
DDB2-206ENST00000612309 MAPKBP1O60336 1514 aa10.78□□□□□ -0.68
DDB2-206ENST00000612309 PATL2C9JE40 543 aaKnown RBP10.78□□□□□ -0.68
DDB2-206ENST00000612309 FRAT2O75474 233 aaPredicted RBP10.78□□□□□ -0.68
DDB2-206ENST00000612309 HNRNPMP52272 730 aaKnown RBP eCLIP10.78□□□□□ -0.682e-9■■□□□ 11.6
DDB2-206ENST00000612309 RGS22Q8NE09 1264 aa10.78□□□□□ -0.68
DDB2-206ENST00000612309 BACH2Q9BYV9 841 aa10.78□□□□□ -0.68
DDB2-206ENST00000612309 DIP2BQ9P265 1576 aa10.77□□□□□ -0.68
DDB2-206ENST00000612309 KIF13AQ9H1H9 1805 aa10.77□□□□□ -0.69
DDB2-206ENST00000612309 TMED8Q6PL24 325 aaPredicted RBP10.77□□□□□ -0.69
DDB2-206ENST00000612309 FAM13BQ9NYF5 915 aa10.76□□□□□ -0.69
DDB2-206ENST00000612309 TCERG1O14776 1098 aaKnown RBP10.76□□□□□ -0.69
DDB2-206ENST00000612309 DNTTIP2Q5QJE6 756 aaKnown RBP10.76□□□□□ -0.69
DDB2-206ENST00000612309 CFAP44Q96MT7 982 aa10.76□□□□□ -0.69
DDB2-206ENST00000612309 IRX3P78415 501 aaPredicted RBP10.75□□□□□ -0.69
DDB2-206ENST00000612309 AEBP1Q8IUX7 1158 aa10.75□□□□□ -0.69
DDB2-206ENST00000612309 SMAP1Q8IYB5 467 aaPredicted RBP10.75□□□□□ -0.69
DDB2-206ENST00000612309 ZBED9Q6R2W3 1325 aa10.75□□□□□ -0.69
DDB2-206ENST00000612309 AKNAQ7Z591 1439 aa10.74□□□□□ -0.69
DDB2-206ENST00000612309 HSP90B1P14625 803 aaKnown RBP10.74□□□□□ -0.69
DDB2-206ENST00000612309 L1TD1Q5T7N2 865 aaKnown RBP10.74□□□□□ -0.69
DDB2-206ENST00000612309 TIAM1Q13009 1591 aa10.74□□□□□ -0.69
DDB2-206ENST00000612309 FYCO1Q9BQS8 1478 aa10.74□□□□□ -0.69
DDB2-206ENST00000612309 TPM2P07951 284 aa10.74□□□□□ -0.69
DDB2-206ENST00000612309 PLCB2Q00722 1185 aa10.74□□□□□ -0.69
DDB2-206ENST00000612309 HECW1Q76N89 1606 aa10.73□□□□□ -0.69
DDB2-206ENST00000612309 MYCNP04198 464 aaPredicted RBP10.73□□□□□ -0.69
DDB2-206ENST00000612309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.72□□□□□ -0.693e-7■■■□□ 18.8
DDB2-206ENST00000612309 NCOA2Q15596 1464 aa10.72□□□□□ -0.69
DDB2-206ENST00000612309 CHMP4CQ96CF2 233 aa10.71□□□□□ -0.69
DDB2-206ENST00000612309 APPP05067 770 aa10.71□□□□□ -0.69
DDB2-206ENST00000612309 POGKQ9P215 609 aa10.71□□□□□ -0.69
DDB2-206ENST00000612309 LRRIQ1Q96JM4 1722 aa10.71□□□□□ -0.7
DDB2-206ENST00000612309 MAGI3Q5TCQ9 1506 aa10.71□□□□□ -0.7
DDB2-206ENST00000612309 RNF123Q5XPI4 1314 aa10.71□□□□□ -0.7
DDB2-206ENST00000612309 TNNT2P45379 298 aaPredicted RBP10.71□□□□□ -0.7
DDB2-206ENST00000612309 AFAP1Q8N556 730 aa10.71□□□□□ -0.7
DDB2-206ENST00000612309 SLC52A1Q9NWF4 448 aa10.71□□□□□ -0.7
DDB2-206ENST00000612309 COL17A1Q9UMD9 1497 aaPredicted RBP10.7□□□□□ -0.7
DDB2-206ENST00000612309 MS4A1P11836 297 aa10.7□□□□□ -0.7
DDB2-206ENST00000612309 KIF14Q15058 1648 aa10.7□□□□□ -0.7
DDB2-206ENST00000612309 SOX12O15370 315 aa10.7□□□□□ -0.7
DDB2-206ENST00000612309 MLECQ14165 292 aa10.7□□□□□ -0.7
DDB2-206ENST00000612309 HDAC5Q9UQL6 1122 aa10.7□□□□□ -0.7
DDB2-206ENST00000612309 ZBTB9Q96C00 473 aa10.69□□□□□ -0.7
DDB2-206ENST00000612309 PPP6R1Q9UPN7 881 aa10.69□□□□□ -0.7
DDB2-206ENST00000612309 TROQ12816 1431 aaPredicted RBP10.69□□□□□ -0.7
DDB2-206ENST00000612309 SENP3Q9H4L4 574 aaPredicted RBP10.69□□□□□ -0.7
DDB2-206ENST00000612309 FAM193AP78312 1265 aa10.68□□□□□ -0.7
DDB2-206ENST00000612309 EFCAB2Q5VUJ9 269 aa10.68□□□□□ -0.7
DDB2-206ENST00000612309 KIAA1211Q6ZU35 1233 aa10.68□□□□□ -0.7
DDB2-206ENST00000612309 SMG6Q86US8 1419 aaKnown RBP10.68□□□□□ -0.7
DDB2-206ENST00000612309 DMTNQ08495 405 aa10.68□□□□□ -0.7
DDB2-206ENST00000612309 TTC37Q6PGP7 1564 aa10.67□□□□□ -0.7
DDB2-206ENST00000612309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.67□□□□□ -0.7
DDB2-206ENST00000612309 NPM3O75607 178 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms