RNA–Protein interactions for RNA: ENST00000612309.4

DDB2-206, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-206ENST00000612309 NISCHQ9Y2I1 1504 aa16.12■□□□□ 0.17
DDB2-206ENST00000612309 PELP1Q8IZL8 1130 aaKnown RBP14.79□□□□□ -0.04
DDB2-206ENST00000612309 MYT1Q01538 1121 aa14.48□□□□□ -0.09
DDB2-206ENST00000612309 ABCC9O60706 1549 aa14.2□□□□□ -0.14
DDB2-206ENST00000612309 DCAF8L2P0C7V8 631 aa14.1□□□□□ -0.15
DDB2-206ENST00000612309 CCDC180Q9P1Z9 1646 aa14.09□□□□□ -0.15
DDB2-206ENST00000612309 PRKCSHP14314 528 aaPredicted RBP14□□□□□ -0.17
DDB2-206ENST00000612309 HRCP23327 699 aa13.95□□□□□ -0.18
DDB2-206ENST00000612309 TTBK1Q5TCY1 1321 aaPredicted RBP13.83□□□□□ -0.2
DDB2-206ENST00000612309 SCAF1Q9H7N4 1312 aaKnown RBP13.75□□□□□ -0.21
DDB2-206ENST00000612309 PPARGC1BQ86YN6 1023 aaKnown RBP13.73□□□□□ -0.21
DDB2-206ENST00000612309 SHROOM4Q9ULL8 1493 aa13.68□□□□□ -0.22
DDB2-206ENST00000612309 BCL11AQ9H165 835 aa13.67□□□□□ -0.22
DDB2-206ENST00000612309 FAM9AQ8IZU1 332 aaPredicted RBP13.55□□□□□ -0.24
DDB2-206ENST00000612309 ERICH6Q7L0X2 663 aa13.47□□□□□ -0.25
DDB2-206ENST00000612309 CHIC1Q5VXU3 224 aa13.45□□□□□ -0.26
DDB2-206ENST00000612309 PABPN1Q86U42 306 aaKnown RBP eCLIP13.44□□□□□ -0.26
DDB2-206ENST00000612309 APLP2Q06481 763 aa13.4□□□□□ -0.26
DDB2-206ENST00000612309 ZCCHC6Q5VYS8 1495 aaKnown RBP13.4□□□□□ -0.26
DDB2-206ENST00000612309 RB1CC1Q8TDY2 1594 aa13.39□□□□□ -0.27
DDB2-206ENST00000612309 SLC24A1O60721 1099 aa13.35□□□□□ -0.27
DDB2-206ENST00000612309 NACADO15069 1562 aa13.33□□□□□ -0.28
DDB2-206ENST00000612309 PCGF6Q9BYE7 350 aa13.28□□□□□ -0.28
DDB2-206ENST00000612309 SCRIBQ14160 1630 aa13.22□□□□□ -0.29
DDB2-206ENST00000612309 SUPT5HO00267 1087 aaKnown RBP13.18□□□□□ -0.3
DDB2-206ENST00000612309 CENPBP07199 599 aaPredicted RBP13.15□□□□□ -0.3
DDB2-206ENST00000612309 DCAF1Q9Y4B6 1507 aa13.11□□□□□ -0.31
DDB2-206ENST00000612309 MYO15BQ96JP2 1530 aa13.1□□□□□ -0.31
DDB2-206ENST00000612309 GTF3C3Q9Y5Q9 886 aa13.09□□□□□ -0.31
DDB2-206ENST00000612309 UNC13AQ9UPW8 1703 aa13.09□□□□□ -0.31
DDB2-206ENST00000612309 DNAJC5BQ9UF47 199 aa13.05□□□□□ -0.32
DDB2-206ENST00000612309 ACIN1Q9UKV3 1341 aaKnown RBP13.03□□□□□ -0.32
DDB2-206ENST00000612309 AEBP2Q6ZN18 517 aaPredicted RBP13.03□□□□□ -0.32
DDB2-206ENST00000612309 NEUROD1Q13562 356 aa13.02□□□□□ -0.33
DDB2-206ENST00000612309 BICRAQ9NZM4 1560 aa13□□□□□ -0.33
DDB2-206ENST00000612309 EHMT2Q96KQ7 1210 aa13□□□□□ -0.33
DDB2-206ENST00000612309 CSRNP3Q8WYN3 585 aa12.88□□□□□ -0.35
DDB2-206ENST00000612309 ANP32EQ9BTT0 268 aa12.87□□□□□ -0.35
DDB2-206ENST00000612309 ZEB1P37275 1124 aaPredicted RBP12.85□□□□□ -0.35
DDB2-206ENST00000612309 EIF5BO60841 1220 aaKnown RBP12.82□□□□□ -0.36
DDB2-206ENST00000612309 ANO8Q9HCE9 1232 aaPredicted RBP12.8□□□□□ -0.36
DDB2-206ENST00000612309 PLEKHG5O94827 1062 aa12.77□□□□□ -0.36
DDB2-206ENST00000612309 DAXXQ9UER7 740 aaPredicted RBP12.73□□□□□ -0.37
DDB2-206ENST00000612309 CECR2Q9BXF3 1484 aa12.73□□□□□ -0.37
DDB2-206ENST00000612309 EIF4G1Q04637 1599 aaKnown RBP12.7□□□□□ -0.38
DDB2-206ENST00000612309 TRIM26Q12899 539 aaPredicted RBP12.69□□□□□ -0.38
DDB2-206ENST00000612309 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
DDB2-206ENST00000612309 CCDC136Q96JN2 1154 aa12.56□□□□□ -0.4
DDB2-206ENST00000612309 MROH2BQ7Z745 1585 aa12.53□□□□□ -0.4
DDB2-206ENST00000612309 UBE2Q2Q8WVN8 375 aa12.51□□□□□ -0.41
DDB2-206ENST00000612309 SMARCA4P51532 1647 aa12.48□□□□□ -0.41
DDB2-206ENST00000612309 SALL2Q9Y467 1007 aaPredicted RBP12.47□□□□□ -0.41
DDB2-206ENST00000612309 BAZ1AQ9NRL2 1556 aaPredicted RBP12.47□□□□□ -0.41
DDB2-206ENST00000612309 PLPPR3Q6T4P5 718 aa12.46□□□□□ -0.41
DDB2-206ENST00000612309 ATAD2BQ9ULI0 1458 aa12.45□□□□□ -0.42
DDB2-206ENST00000612309 PODXL2Q9NZ53 605 aa12.45□□□□□ -0.42
DDB2-206ENST00000612309 YTHDC1Q96MU7 727 aaKnown RBP12.43□□□□□ -0.42
DDB2-206ENST00000612309 DIEXFQ68CQ4 756 aaKnown RBP12.42□□□□□ -0.42
DDB2-206ENST00000612309 RSF1Q96T23 1441 aaPredicted RBP12.41□□□□□ -0.42
DDB2-206ENST00000612309 WIZO95785 1651 aa12.41□□□□□ -0.42
DDB2-206ENST00000612309 BAZ1BQ9UIG0 1483 aaKnown RBP12.4□□□□□ -0.42
DDB2-206ENST00000612309 PKNOX2Q96KN3 472 aa12.36□□□□□ -0.43
DDB2-206ENST00000612309 NCAPD3P42695 1498 aa12.35□□□□□ -0.43
DDB2-206ENST00000612309 SMARCA2P51531 1590 aa12.35□□□□□ -0.43
DDB2-206ENST00000612309 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
DDB2-206ENST00000612309 PHF23Q9BUL5 403 aaPredicted RBP12.33□□□□□ -0.44
DDB2-206ENST00000612309 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.31□□□□□ -0.44
DDB2-206ENST00000612309 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
DDB2-206ENST00000612309 NESP48681 1621 aa12.29□□□□□ -0.44
DDB2-206ENST00000612309 HMGXB3Q12766 1538 aa12.23□□□□□ -0.45
DDB2-206ENST00000612309 ERCC6Q03468 1493 aa12.21□□□□□ -0.46
DDB2-206ENST00000612309 PEG3Q9GZU2 1588 aa12.2□□□□□ -0.46
DDB2-206ENST00000612309 SUPT16HQ9Y5B9 1047 aaKnown RBP12.17□□□□□ -0.46
DDB2-206ENST00000612309 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
DDB2-206ENST00000612309 RTN4Q9NQC3 1192 aaKnown RBP12.16□□□□□ -0.46
DDB2-206ENST00000612309 TOP2AP11388 1531 aaKnown RBP12.14□□□□□ -0.47
DDB2-206ENST00000612309 CLSPNQ9HAW4 1339 aa12.14□□□□□ -0.47
DDB2-206ENST00000612309 CCDC88BA6NC98 1476 aa12.13□□□□□ -0.47
DDB2-206ENST00000612309 DEKP35659 375 aaKnown RBP12.12□□□□□ -0.47
DDB2-206ENST00000612309 CADPSQ9ULU8 1353 aa12.11□□□□□ -0.47
DDB2-206ENST00000612309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
DDB2-206ENST00000612309 CCER1Q8TC90 406 aaPredicted RBP12.06□□□□□ -0.48
DDB2-206ENST00000612309 MIER1Q8N108 512 aa12.03□□□□□ -0.48
DDB2-206ENST00000612309 PDS5BQ9NTI5 1447 aa12.02□□□□□ -0.48
DDB2-206ENST00000612309 A0A0U1RQG5 324 aaPredicted RBP12.01□□□□□ -0.49
DDB2-206ENST00000612309 ZNF316A6NFI3 1004 aaPredicted RBP12.01□□□□□ -0.49
DDB2-206ENST00000612309 RANGAP1P46060 587 aaPredicted RBP12□□□□□ -0.49
DDB2-206ENST00000612309 FANCD2Q9BXW9 1451 aa11.99□□□□□ -0.49
DDB2-206ENST00000612309 LAMC3Q9Y6N6 1575 aa11.99□□□□□ -0.49
DDB2-206ENST00000612309 MSH5O43196 834 aa11.99□□□□□ -0.49
DDB2-206ENST00000612309 ERICH6BQ5W0A0 696 aa11.98□□□□□ -0.49
DDB2-206ENST00000612309 KIF21AQ7Z4S6 1674 aa11.98□□□□□ -0.49
DDB2-206ENST00000612309 RBM19Q9Y4C8 960 aaKnown RBP11.98□□□□□ -0.49
DDB2-206ENST00000612309 CFTRP13569 1480 aa11.98□□□□□ -0.49
DDB2-206ENST00000612309 IL27Q8NEV9 243 aa11.97□□□□□ -0.49
DDB2-206ENST00000612309 CEP164Q9UPV0 1460 aa11.95□□□□□ -0.5
DDB2-206ENST00000612309 BCANQ96GW7 911 aa11.95□□□□□ -0.5
DDB2-206ENST00000612309 PDE4CQ08493 712 aa11.94□□□□□ -0.5
DDB2-206ENST00000612309 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
DDB2-206ENST00000612309 NEFLP07196 543 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms