RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 CCDC141Q6ZP82 1450 aa27.83■■■□□ 2.05
MUC1-224ENST00000611577 DNMT1P26358 1616 aaKnown RBP27.82■■■□□ 2.04
MUC1-224ENST00000611577 CAMSAP2Q08AD1 1489 aa27.81■■■□□ 2.04
MUC1-224ENST00000611577 KIF3BO15066 747 aa27.8■■■□□ 2.04
MUC1-224ENST00000611577 NCOA2Q15596 1464 aa27.8■■■□□ 2.04
MUC1-224ENST00000611577 KDM5DQ9BY66 1539 aa27.79■■■□□ 2.04
MUC1-224ENST00000611577 TNRQ92752 1358 aa27.79■■■□□ 2.04
MUC1-224ENST00000611577 PZPP20742 1482 aa27.76■■■□□ 2.04
MUC1-224ENST00000611577 FBXO31Q5XUX0 539 aaPredicted RBP27.76■■■□□ 2.03
MUC1-224ENST00000611577 FAM135AQ9P2D6 1515 aa27.76■■■□□ 2.03
MUC1-224ENST00000611577 POLR1AO95602 1720 aaPredicted RBP27.73■■■□□ 2.03
MUC1-224ENST00000611577 WASHC2CQ9Y4E1 1318 aa27.72■■■□□ 2.03
MUC1-224ENST00000611577 RSPH4AQ5TD94 716 aa27.72■■■□□ 2.03
MUC1-224ENST00000611577 NEURL4Q96JN8 1562 aa27.72■■■□□ 2.03
MUC1-224ENST00000611577 ARHGEF5Q12774 1597 aa27.69■■■□□ 2.02
MUC1-224ENST00000611577 APLP2Q06481 763 aa27.66■■■□□ 2.02
MUC1-224ENST00000611577 CPS1P31327 1500 aa27.66■■■□□ 2.02
MUC1-224ENST00000611577 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.65■■■□□ 2.02
MUC1-224ENST00000611577 TSPY4P0CV99 314 aa27.65■■■□□ 2.02
MUC1-224ENST00000611577 TSPY10P0CW01 314 aa27.65■■■□□ 2.02
MUC1-224ENST00000611577 MIA2Q96PC5 1412 aa27.65■■■□□ 2.02
MUC1-224ENST00000611577 NLRP1Q9C000 1473 aa27.64■■■□□ 2.02
MUC1-224ENST00000611577 SHANK2Q9UPX8 1470 aa27.64■■■□□ 2.02
MUC1-224ENST00000611577 SCAF1Q9H7N4 1312 aaKnown RBP27.64■■■□□ 2.01
MUC1-224ENST00000611577 ANKLE2Q86XL3 938 aa27.63■■■□□ 2.01
MUC1-224ENST00000611577 UGGT1Q9NYU2 1555 aa27.62■■■□□ 2.01
MUC1-224ENST00000611577 THEMISQ8N1K5 641 aaPredicted RBP27.61■■■□□ 2.01
MUC1-224ENST00000611577 PIP4K2BP78356 416 aa27.6■■■□□ 2.01
MUC1-224ENST00000611577 LRRC9Q6ZRR7 1453 aa27.58■■■□□ 2.01
MUC1-224ENST00000611577 VWDEQ8N2E2 1590 aa27.58■■■□□ 2.01
MUC1-224ENST00000611577 RNF17Q9BXT8 1623 aaKnown RBP27.58■■■□□ 2.01
MUC1-224ENST00000611577 NPHP4O75161 1426 aaPredicted RBP27.58■■■□□ 2
MUC1-224ENST00000611577 TOM1O60784 492 aa27.57■■■□□ 2
MUC1-224ENST00000611577 ABCC3O15438 1527 aa27.57■■■□□ 2
MUC1-224ENST00000611577 HSPA1LP34931 641 aa27.56■■■□□ 2
MUC1-224ENST00000611577 MAST1Q9Y2H9 1570 aa27.56■■■□□ 2
MUC1-224ENST00000611577 DEPDC5O75140 1603 aa27.56■■■□□ 2
MUC1-224ENST00000611577 MED14O60244 1454 aa27.55■■■□□ 2
MUC1-224ENST00000611577 MAP3K1Q13233 1512 aa27.54■■■□□ 2
MUC1-224ENST00000611577 ZC3H13Q5T200 1668 aaKnown RBP27.54■■■□□ 2
MUC1-224ENST00000611577 EIF2AK4Q9P2K8 1649 aaKnown RBP27.52■■■□□ 2
MUC1-224ENST00000611577 IQGAP1P46940 1657 aa27.51■■□□□ 1.99
MUC1-224ENST00000611577 ERVK-7P63135 1459 aa27.5■■□□□ 1.99
MUC1-224ENST00000611577 MED1Q15648 1581 aaPredicted RBP27.49■■□□□ 1.99
MUC1-224ENST00000611577 MROH1Q8NDA8 1641 aa27.48■■□□□ 1.99
MUC1-224ENST00000611577 MYOM3Q5VTT5 1437 aa27.45■■□□□ 1.98
MUC1-224ENST00000611577 KANK4Q5T7N3 995 aaPredicted RBP27.44■■□□□ 1.98
MUC1-224ENST00000611577 CEP152O94986 1710 aa27.44■■□□□ 1.98
MUC1-224ENST00000611577 ALKQ9UM73 1620 aa27.43■■□□□ 1.98
MUC1-224ENST00000611577 DUOX2Q9NRD8 1548 aa27.41■■□□□ 1.98
MUC1-224ENST00000611577 STRCP1A6NGW2 1772 aa27.4■■□□□ 1.98
MUC1-224ENST00000611577 LRRC7Q96NW7 1537 aa27.39■■□□□ 1.98
MUC1-224ENST00000611577 SYNMO15061 1565 aa27.39■■□□□ 1.97
MUC1-224ENST00000611577 UBR1Q8IWV7 1749 aa27.38■■□□□ 1.97
MUC1-224ENST00000611577 SCAF11Q99590 1463 aaKnown RBP27.36■■□□□ 1.97
MUC1-224ENST00000611577 KIF15Q9NS87 1388 aa27.35■■□□□ 1.97
MUC1-224ENST00000611577 CFAP65Q6ZU64 1925 aaKnown RBP27.34■■□□□ 1.97
MUC1-224ENST00000611577 PRDM15P57071 1507 aaPredicted RBP27.34■■□□□ 1.97
MUC1-224ENST00000611577 SENP3Q9H4L4 574 aaPredicted RBP27.33■■□□□ 1.97
MUC1-224ENST00000611577 ERBINQ96RT1 1412 aa27.32■■□□□ 1.96
MUC1-224ENST00000611577 PHF23Q9BUL5 403 aaPredicted RBP27.31■■□□□ 1.96
MUC1-224ENST00000611577 ARHGAP31Q2M1Z3 1444 aa27.31■■□□□ 1.96
MUC1-224ENST00000611577 ARHGAP23Q9P227 1491 aa27.31■■□□□ 1.96
MUC1-224ENST00000611577 CROCC2H7BZ55 1655 aa27.3■■□□□ 1.96
MUC1-224ENST00000611577 ABCC5O15440 1437 aa27.3■■□□□ 1.96
MUC1-224ENST00000611577 SLIT1O75093 1534 aa27.3■■□□□ 1.96
MUC1-224ENST00000611577 LTKP29376 864 aa27.28■■□□□ 1.96
MUC1-224ENST00000611577 TXNDC2Q86VQ3 553 aa27.28■■□□□ 1.96
MUC1-224ENST00000611577 RRP7BPQ9NSQ0 103 aa27.28■■□□□ 1.96
MUC1-224ENST00000611577 PTPN23Q9H3S7 1636 aa27.27■■□□□ 1.96
MUC1-224ENST00000611577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.26■■□□□ 1.95
MUC1-224ENST00000611577 DAPK1P53355 1430 aa27.24■■□□□ 1.95
MUC1-224ENST00000611577 PIK3C2BO00750 1634 aa27.23■■□□□ 1.95
MUC1-224ENST00000611577 EID1Q9Y6B2 187 aa27.23■■□□□ 1.95
MUC1-224ENST00000611577 KANK1Q14678 1352 aa27.22■■□□□ 1.95
MUC1-224ENST00000611577 TMEM2Q9UHN6 1383 aa27.2■■□□□ 1.94
MUC1-224ENST00000611577 STAG3Q9UJ98 1225 aa27.19■■□□□ 1.94
MUC1-224ENST00000611577 FGD6Q6ZV73 1430 aa27.17■■□□□ 1.94
MUC1-224ENST00000611577 PPARGC1BQ86YN6 1023 aaKnown RBP27.17■■□□□ 1.94
MUC1-224ENST00000611577 XIRP1Q702N8 1843 aaKnown RBP27.16■■□□□ 1.94
MUC1-224ENST00000611577 EFCAB6Q5THR3 1501 aa27.16■■□□□ 1.94
MUC1-224ENST00000611577 LMTK2Q8IWU2 1503 aa27.15■■□□□ 1.94
MUC1-224ENST00000611577 ANKRD30AQ9BXX3 1397 aa27.14■■□□□ 1.94
MUC1-224ENST00000611577 CHIC2Q9UKJ5 165 aa27.14■■□□□ 1.94
MUC1-224ENST00000611577 KDM5AP29375 1690 aaKnown RBP27.12■■□□□ 1.93
MUC1-224ENST00000611577 IDI1Q13907 227 aa27.11■■□□□ 1.93
MUC1-224ENST00000611577 TMEM94Q12767 1356 aa27.09■■□□□ 1.93
MUC1-224ENST00000611577 ADGRB3O60242 1522 aa27.06■■□□□ 1.92
MUC1-224ENST00000611577 NOS1P29475 1434 aa27.06■■□□□ 1.92
MUC1-224ENST00000611577 FAM135BQ49AJ0 1406 aa27.06■■□□□ 1.92
MUC1-224ENST00000611577 KCNA6P17658 529 aa27.05■■□□□ 1.92
MUC1-224ENST00000611577 SLC26A8Q96RN1 970 aa27.05■■□□□ 1.92
MUC1-224ENST00000611577 TET3O43151 1660 aa27.04■■□□□ 1.92
MUC1-224ENST00000611577 ADGRL2O95490 1459 aa27.01■■□□□ 1.91
MUC1-224ENST00000611577 PROSER2Q86WR7 435 aaPredicted RBP27.01■■□□□ 1.91
MUC1-224ENST00000611577 RBM33Q96EV2 1170 aaKnown RBP27■■□□□ 1.91
MUC1-224ENST00000611577 RGS17Q9UGC6 210 aaPredicted RBP27■■□□□ 1.91
MUC1-224ENST00000611577 FAM50AQ14320 339 aaKnown RBP26.99■■□□□ 1.91
MUC1-224ENST00000611577 NKTRP30414 1462 aaKnown RBP26.99■■□□□ 1.91
MUC1-224ENST00000611577 NWD1Q149M9 1564 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms