RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 NISCHQ9Y2I1 1504 aa43.83■■■■■ 4.61
MUC1-224ENST00000611577 ABCC9O60706 1549 aa39.75■■■■□ 3.95
MUC1-224ENST00000611577 CCDC180Q9P1Z9 1646 aa39.45■■■■□ 3.91
MUC1-224ENST00000611577 RB1CC1Q8TDY2 1594 aa37.69■■■■□ 3.62
MUC1-224ENST00000611577 DNAJC5BQ9UF47 199 aa37.46■■■■□ 3.59
MUC1-224ENST00000611577 NACADO15069 1562 aa37.36■■■■□ 3.57
MUC1-224ENST00000611577 DCAF8L2P0C7V8 631 aa37.13■■■■□ 3.53
MUC1-224ENST00000611577 PABPN1Q86U42 306 aaKnown RBP eCLIP36.95■■■■□ 3.51
MUC1-224ENST00000611577 UNC13AQ9UPW8 1703 aa36.8■■■■□ 3.48
MUC1-224ENST00000611577 MYO15BQ96JP2 1530 aa36.74■■■■□ 3.47
MUC1-224ENST00000611577 BICRAQ9NZM4 1560 aa36.59■■■■□ 3.45
MUC1-224ENST00000611577 ZCCHC6Q5VYS8 1495 aaKnown RBP36.29■■■■□ 3.4
MUC1-224ENST00000611577 DCAF1Q9Y4B6 1507 aa36.18■■■■□ 3.38
MUC1-224ENST00000611577 SHROOM4Q9ULL8 1493 aa36.08■■■■□ 3.37
MUC1-224ENST00000611577 SCRIBQ14160 1630 aa35.97■■■■□ 3.35
MUC1-224ENST00000611577 CC2D2AQ9P2K1 1620 aa35.87■■■■□ 3.33
MUC1-224ENST00000611577 CECR2Q9BXF3 1484 aa35.83■■■■□ 3.33
MUC1-224ENST00000611577 EIF4G1Q04637 1599 aaKnown RBP35.73■■■■□ 3.31
MUC1-224ENST00000611577 DNAJC5Q9H3Z4 198 aa34.59■■■■□ 3.13
MUC1-224ENST00000611577 NCAPD3P42695 1498 aa34.48■■■■□ 3.11
MUC1-224ENST00000611577 ATAD2BQ9ULI0 1458 aa34.36■■■■□ 3.09
MUC1-224ENST00000611577 ERCC6Q03468 1493 aa34.35■■■■□ 3.09
MUC1-224ENST00000611577 CUX2O14529 1486 aa34.34■■■■□ 3.09
MUC1-224ENST00000611577 SMARCA4P51532 1647 aa34.26■■■■□ 3.08
MUC1-224ENST00000611577 SMARCA2P51531 1590 aa34.25■■■■□ 3.07
MUC1-224ENST00000611577 HMGXB3Q12766 1538 aa34.22■■■■□ 3.07
MUC1-224ENST00000611577 BAZ1AQ9NRL2 1556 aaPredicted RBP34.06■■■■□ 3.04
MUC1-224ENST00000611577 NESP48681 1621 aa34.05■■■■□ 3.04
MUC1-224ENST00000611577 BAZ1BQ9UIG0 1483 aaKnown RBP34.03■■■■□ 3.04
MUC1-224ENST00000611577 PEG3Q9GZU2 1588 aa33.91■■■■□ 3.02
MUC1-224ENST00000611577 MROH2BQ7Z745 1585 aa33.78■■■■□ 3
MUC1-224ENST00000611577 THOC2Q8NI27 1593 aaKnown RBP33.77■■■■□ 3
MUC1-224ENST00000611577 LAMC3Q9Y6N6 1575 aa33.76■■■□□ 2.99
MUC1-224ENST00000611577 KIF21AQ7Z4S6 1674 aa33.6■■■□□ 2.97
MUC1-224ENST00000611577 PDS5BQ9NTI5 1447 aa33.59■■■□□ 2.97
MUC1-224ENST00000611577 CADPSQ9ULU8 1353 aa33.43■■■□□ 2.94
MUC1-224ENST00000611577 WIZO95785 1651 aa33.36■■■□□ 2.93
MUC1-224ENST00000611577 MRC2Q9UBG0 1479 aa33.33■■■□□ 2.93
MUC1-224ENST00000611577 WDR62O43379 1518 aa33.24■■■□□ 2.91
MUC1-224ENST00000611577 CEP164Q9UPV0 1460 aa33.14■■■□□ 2.9
MUC1-224ENST00000611577 FANCD2Q9BXW9 1451 aa33.08■■■□□ 2.89
MUC1-224ENST00000611577 TRIM41Q8WV44 630 aa33.03■■■□□ 2.88
MUC1-224ENST00000611577 CFTRP13569 1480 aa32.99■■■□□ 2.87
MUC1-224ENST00000611577 RSF1Q96T23 1441 aaPredicted RBP32.98■■■□□ 2.87
MUC1-224ENST00000611577 TOP2AP11388 1531 aaKnown RBP32.94■■■□□ 2.86
MUC1-224ENST00000611577 URB2Q14146 1524 aaKnown RBP32.82■■■□□ 2.84
MUC1-224ENST00000611577 OSCARQ8IYS5 282 aa32.71■■■□□ 2.83
MUC1-224ENST00000611577 PRDM2Q13029 1718 aa32.63■■■□□ 2.81
MUC1-224ENST00000611577 CCDC88BA6NC98 1476 aa32.55■■■□□ 2.8
MUC1-224ENST00000611577 IFT140Q96RY7 1462 aa32.48■■■□□ 2.79
MUC1-224ENST00000611577 ZNF608Q9ULD9 1512 aaPredicted RBP32.46■■■□□ 2.79
MUC1-224ENST00000611577 TOPBP1Q92547 1522 aa32.41■■■□□ 2.78
MUC1-224ENST00000611577 RIMBP3CA6NJZ7 1639 aa32.34■■■□□ 2.77
MUC1-224ENST00000611577 RIMBP3BA6NNM3 1639 aa32.34■■■□□ 2.77
MUC1-224ENST00000611577 RIMBP3Q9UFD9 1639 aa32.34■■■□□ 2.77
MUC1-224ENST00000611577 ABCC8Q09428 1581 aa32.3■■■□□ 2.76
MUC1-224ENST00000611577 EIF4G3O43432 1585 aaKnown RBP32.28■■■□□ 2.76
MUC1-224ENST00000611577 DNMBPQ6XZF7 1577 aa32.28■■■□□ 2.76
MUC1-224ENST00000611577 ARHGEF11O15085 1522 aa32.22■■■□□ 2.75
MUC1-224ENST00000611577 AQRO60306 1485 aaKnown RBP eCLIP32.13■■■□□ 2.73
MUC1-224ENST00000611577 TARBP1Q13395 1621 aaKnown RBP32.13■■■□□ 2.73
MUC1-224ENST00000611577 POLA1P09884 1462 aaPredicted RBP32.07■■■□□ 2.72
MUC1-224ENST00000611577 CHD1O14646 1710 aa32.06■■■□□ 2.72
MUC1-224ENST00000611577 FBLN2P98095 1184 aa31.98■■■□□ 2.71
MUC1-224ENST00000611577 CYB5RLQ6IPT4 315 aa31.98■■■□□ 2.71
MUC1-224ENST00000611577 RAD54L2Q9Y4B4 1467 aa31.96■■■□□ 2.71
MUC1-224ENST00000611577 SOGA1O94964 1423 aa31.91■■■□□ 2.7
MUC1-224ENST00000611577 TDRD9Q8NDG6 1382 aaKnown RBP31.89■■■□□ 2.7
MUC1-224ENST00000611577 ARAP1Q96P48 1450 aa31.89■■■□□ 2.7
MUC1-224ENST00000611577 FGD5Q6ZNL6 1462 aa31.84■■■□□ 2.69
MUC1-224ENST00000611577 SNAPC4Q5SXM2 1469 aa31.82■■■□□ 2.68
MUC1-224ENST00000611577 WDR97A6NE52 1622 aa31.79■■■□□ 2.68
MUC1-224ENST00000611577 CUX1P39880 1505 aa31.76■■■□□ 2.68
MUC1-224ENST00000611577 TRHP20396 242 aaPredicted RBP31.73■■■□□ 2.67
MUC1-224ENST00000611577 CLASP1Q7Z460 1538 aa31.7■■■□□ 2.67
MUC1-224ENST00000611577 MAGI1Q96QZ7 1491 aaPredicted RBP31.7■■■□□ 2.66
MUC1-224ENST00000611577 CHMP7Q8WUX9 453 aaPredicted RBP31.69■■■□□ 2.66
MUC1-224ENST00000611577 GRIN2BQ13224 1484 aa31.67■■■□□ 2.66
MUC1-224ENST00000611577 SYNJ1O43426 1573 aa31.67■■■□□ 2.66
MUC1-224ENST00000611577 SYNJ2O15056 1496 aa31.6■■■□□ 2.65
MUC1-224ENST00000611577 SUPT5HO00267 1087 aaKnown RBP31.59■■■□□ 2.65
MUC1-224ENST00000611577 PBRM1Q86U86 1689 aa31.53■■■□□ 2.64
MUC1-224ENST00000611577 GAPVD1Q14C86 1478 aa31.52■■■□□ 2.64
MUC1-224ENST00000611577 ABCA10Q8WWZ4 1543 aa31.45■■■□□ 2.63
MUC1-224ENST00000611577 ABCA5Q8WWZ7 1642 aa31.43■■■□□ 2.62
MUC1-224ENST00000611577 WRNQ14191 1432 aaPredicted RBP eCLIP31.27■■■□□ 2.6
MUC1-224ENST00000611577 GRIN2AQ12879 1464 aa31.27■■■□□ 2.6
MUC1-224ENST00000611577 ADAMTS12P58397 1594 aa31.24■■■□□ 2.59
MUC1-224ENST00000611577 ERCC6L2Q5T890 1561 aa31.2■■■□□ 2.58
MUC1-224ENST00000611577 CEP170Q5SW79 1584 aa31.17■■■□□ 2.58
MUC1-224ENST00000611577 TOP2BQ02880 1626 aa31.17■■■□□ 2.58
MUC1-224ENST00000611577 BIVM-ERCC5R4GMW8 1640 aa31.17■■■□□ 2.58
MUC1-224ENST00000611577 NUP160Q12769 1436 aa31.16■■■□□ 2.58
MUC1-224ENST00000611577 FHAD1B1AJZ9 1412 aa31.11■■■□□ 2.57
MUC1-224ENST00000611577 SHROOM2Q13796 1616 aa31.05■■■□□ 2.56
MUC1-224ENST00000611577 ERICH3Q5RHP9 1530 aa31.04■■■□□ 2.56
MUC1-224ENST00000611577 AEBP2Q6ZN18 517 aaPredicted RBP31■■■□□ 2.55
MUC1-224ENST00000611577 PRG4Q92954 1404 aaPredicted RBP30.9■■■□□ 2.54
MUC1-224ENST00000611577 JPH4Q96JJ6 628 aa30.82■■■□□ 2.52
MUC1-224ENST00000611577 RUSC2Q8N2Y8 1516 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms