RNA–Protein interactions for RNA: ENST00000601267.5

C19orf48-213, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 782 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-213ENST00000601267 TNRQ92752 1358 aa19.68■□□□□ 0.74
C19orf48-213ENST00000601267 RTEL1-TNFRSF6BF6WH68 1400 aa19.68■□□□□ 0.74
C19orf48-213ENST00000601267 FBXO31Q5XUX0 539 aaPredicted RBP19.67■□□□□ 0.74
C19orf48-213ENST00000601267 PIP4K2BP78356 416 aa19.66■□□□□ 0.74
C19orf48-213ENST00000601267 CEP162Q5TB80 1403 aa19.66■□□□□ 0.74
C19orf48-213ENST00000601267 CCDC141Q6ZP82 1450 aa19.66■□□□□ 0.74
C19orf48-213ENST00000601267 KDM5DQ9BY66 1539 aa19.66■□□□□ 0.74
C19orf48-213ENST00000601267 CAMSAP2Q08AD1 1489 aa19.65■□□□□ 0.74
C19orf48-213ENST00000601267 NEURL4Q96JN8 1562 aa19.65■□□□□ 0.74
C19orf48-213ENST00000601267 PZPP20742 1482 aa19.63■□□□□ 0.73
C19orf48-213ENST00000601267 WASHC2CQ9Y4E1 1318 aa19.63■□□□□ 0.73
C19orf48-213ENST00000601267 CPS1P31327 1500 aa19.61■□□□□ 0.73
C19orf48-213ENST00000601267 HSPA1LP34931 641 aa19.61■□□□□ 0.73
C19orf48-213ENST00000601267 NCOA2Q15596 1464 aa19.6■□□□□ 0.73
C19orf48-213ENST00000601267 SHANK2Q9UPX8 1470 aa19.6■□□□□ 0.73
C19orf48-213ENST00000601267 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.6■□□□□ 0.73
C19orf48-213ENST00000601267 TOM1O60784 492 aa19.59■□□□□ 0.73
C19orf48-213ENST00000601267 FAM135AQ9P2D6 1515 aa19.59■□□□□ 0.73
C19orf48-213ENST00000601267 ANKLE2Q86XL3 938 aa19.58■□□□□ 0.72
C19orf48-213ENST00000601267 MED1Q15648 1581 aaPredicted RBP19.57■□□□□ 0.72
C19orf48-213ENST00000601267 UGGT1Q9NYU2 1555 aa19.57■□□□□ 0.72
C19orf48-213ENST00000601267 NLRP1Q9C000 1473 aa19.55■□□□□ 0.72
C19orf48-213ENST00000601267 THEMISQ8N1K5 641 aaPredicted RBP19.55■□□□□ 0.72
C19orf48-213ENST00000601267 VWDEQ8N2E2 1590 aa19.55■□□□□ 0.72
C19orf48-213ENST00000601267 MIA2Q96PC5 1412 aa19.55■□□□□ 0.72
C19orf48-213ENST00000601267 NPHP4O75161 1426 aaPredicted RBP19.54■□□□□ 0.72
C19orf48-213ENST00000601267 TSPY4P0CV99 314 aa19.54■□□□□ 0.72
C19orf48-213ENST00000601267 TSPY10P0CW01 314 aa19.54■□□□□ 0.72
C19orf48-213ENST00000601267 RSPH4AQ5TD94 716 aa19.54■□□□□ 0.72
C19orf48-213ENST00000601267 ARHGEF5Q12774 1597 aa19.53■□□□□ 0.72
C19orf48-213ENST00000601267 SENP3Q9H4L4 574 aaPredicted RBP19.53■□□□□ 0.72
C19orf48-213ENST00000601267 IQGAP1P46940 1657 aa19.52■□□□□ 0.71
C19orf48-213ENST00000601267 DEPDC5O75140 1603 aa19.51■□□□□ 0.71
C19orf48-213ENST00000601267 RNF17Q9BXT8 1623 aaKnown RBP19.49■□□□□ 0.71
C19orf48-213ENST00000601267 ABCC3O15438 1527 aa19.49■□□□□ 0.71
C19orf48-213ENST00000601267 MED14O60244 1454 aa19.48■□□□□ 0.71
C19orf48-213ENST00000601267 PHF23Q9BUL5 403 aaPredicted RBP19.48■□□□□ 0.71
C19orf48-213ENST00000601267 ZC3H13Q5T200 1668 aaKnown RBP19.48■□□□□ 0.71
C19orf48-213ENST00000601267 ALKQ9UM73 1620 aa19.46■□□□□ 0.71
C19orf48-213ENST00000601267 STRCP1A6NGW2 1772 aa19.45■□□□□ 0.7
C19orf48-213ENST00000601267 ERVK-7P63135 1459 aa19.45■□□□□ 0.7
C19orf48-213ENST00000601267 CEP152O94986 1710 aa19.45■□□□□ 0.7
C19orf48-213ENST00000601267 MAST1Q9Y2H9 1570 aa19.44■□□□□ 0.7
C19orf48-213ENST00000601267 EIF2AK4Q9P2K8 1649 aaKnown RBP19.43■□□□□ 0.7
C19orf48-213ENST00000601267 CFAP65Q6ZU64 1925 aaKnown RBP19.43■□□□□ 0.7
C19orf48-213ENST00000601267 LRRC9Q6ZRR7 1453 aa19.43■□□□□ 0.7
C19orf48-213ENST00000601267 LRRC7Q96NW7 1537 aa19.42■□□□□ 0.7
C19orf48-213ENST00000601267 SYNMO15061 1565 aa19.42■□□□□ 0.7
C19orf48-213ENST00000601267 MROH1Q8NDA8 1641 aa19.41■□□□□ 0.7
C19orf48-213ENST00000601267 UBR1Q8IWV7 1749 aa19.39■□□□□ 0.7
C19orf48-213ENST00000601267 VPS8Q8N3P4 1428 aa19.38■□□□□ 0.69
C19orf48-213ENST00000601267 SCAF11Q99590 1463 aaKnown RBP19.37■□□□□ 0.69
C19orf48-213ENST00000601267 DUOX2Q9NRD8 1548 aa19.35■□□□□ 0.69
C19orf48-213ENST00000601267 KANK4Q5T7N3 995 aaPredicted RBP19.35■□□□□ 0.69
C19orf48-213ENST00000601267 MYOM3Q5VTT5 1437 aa19.34■□□□□ 0.69
C19orf48-213ENST00000601267 TXNDC2Q86VQ3 553 aa19.33■□□□□ 0.68
C19orf48-213ENST00000601267 LTKP29376 864 aa19.32■□□□□ 0.68
C19orf48-213ENST00000601267 KIF15Q9NS87 1388 aa19.32■□□□□ 0.68
C19orf48-213ENST00000601267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.31■□□□□ 0.68not detected■□□□□ 9.6
C19orf48-213ENST00000601267 PRDM15P57071 1507 aaPredicted RBP19.3■□□□□ 0.68
C19orf48-213ENST00000601267 SLIT1O75093 1534 aa19.3■□□□□ 0.68
C19orf48-213ENST00000601267 ARHGAP23Q9P227 1491 aa19.29■□□□□ 0.68
C19orf48-213ENST00000601267 RRP7BPQ9NSQ0 103 aa19.29■□□□□ 0.68
C19orf48-213ENST00000601267 STAG3Q9UJ98 1225 aa19.29■□□□□ 0.68
C19orf48-213ENST00000601267 EID1Q9Y6B2 187 aa19.29■□□□□ 0.68
C19orf48-213ENST00000601267 CROCC2H7BZ55 1655 aa19.29■□□□□ 0.68
C19orf48-213ENST00000601267 PIK3C2BO00750 1634 aa19.29■□□□□ 0.68
C19orf48-213ENST00000601267 XIRP1Q702N8 1843 aaKnown RBP19.28■□□□□ 0.68
C19orf48-213ENST00000601267 LOC105371045A0A1W2PR82 267 aa19.28■□□□□ 0.68
C19orf48-213ENST00000601267 ERBINQ96RT1 1412 aa19.27■□□□□ 0.68
C19orf48-213ENST00000601267 ARHGAP31Q2M1Z3 1444 aa19.26■□□□□ 0.67
C19orf48-213ENST00000601267 MAP3K1Q13233 1512 aa19.26■□□□□ 0.67
C19orf48-213ENST00000601267 PTPN23Q9H3S7 1636 aa19.25■□□□□ 0.67
C19orf48-213ENST00000601267 ABCC5O15440 1437 aa19.25■□□□□ 0.67
C19orf48-213ENST00000601267 KANK1Q14678 1352 aa19.24■□□□□ 0.67
C19orf48-213ENST00000601267 TMEM2Q9UHN6 1383 aa19.23■□□□□ 0.67
C19orf48-213ENST00000601267 EFCAB6Q5THR3 1501 aa19.21■□□□□ 0.67
C19orf48-213ENST00000601267 DAPK1P53355 1430 aa19.21■□□□□ 0.67
C19orf48-213ENST00000601267 TMEM94Q12767 1356 aa19.2■□□□□ 0.66
C19orf48-213ENST00000601267 RGS17Q9UGC6 210 aaPredicted RBP19.2■□□□□ 0.66
C19orf48-213ENST00000601267 CHIC2Q9UKJ5 165 aa19.2■□□□□ 0.66
C19orf48-213ENST00000601267 RBM33Q96EV2 1170 aaKnown RBP19.19■□□□□ 0.66
C19orf48-213ENST00000601267 APLP2Q06481 763 aa19.18■□□□□ 0.66
C19orf48-213ENST00000601267 SLC26A8Q96RN1 970 aa19.18■□□□□ 0.66
C19orf48-213ENST00000601267 IDI1Q13907 227 aa19.17■□□□□ 0.66
C19orf48-213ENST00000601267 BCANQ96GW7 911 aa19.17■□□□□ 0.66
C19orf48-213ENST00000601267 ROBO1Q9Y6N7 1651 aa19.17■□□□□ 0.66
C19orf48-213ENST00000601267 FAM135BQ49AJ0 1406 aa19.17■□□□□ 0.66
C19orf48-213ENST00000601267 PROSER2Q86WR7 435 aaPredicted RBP19.16■□□□□ 0.66
C19orf48-213ENST00000601267 KDM5AP29375 1690 aaKnown RBP19.16■□□□□ 0.66
C19orf48-213ENST00000601267 KCNA6P17658 529 aa19.15■□□□□ 0.66
C19orf48-213ENST00000601267 ANKRD30AQ9BXX3 1397 aa19.15■□□□□ 0.66
C19orf48-213ENST00000601267 FGD6Q6ZV73 1430 aa19.15■□□□□ 0.66
C19orf48-213ENST00000601267 LMTK2Q8IWU2 1503 aa19.15■□□□□ 0.66
C19orf48-213ENST00000601267 ADGRB3O60242 1522 aa19.14■□□□□ 0.65
C19orf48-213ENST00000601267 TET3O43151 1660 aa19.12■□□□□ 0.65
C19orf48-213ENST00000601267 POTEAQ6S8J7 498 aa19.1■□□□□ 0.65
C19orf48-213ENST00000601267 NWD1Q149M9 1564 aa19.1■□□□□ 0.65
C19orf48-213ENST00000601267 NKTRP30414 1462 aaKnown RBP19.09■□□□□ 0.65
C19orf48-213ENST00000601267 NOS1P29475 1434 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms