RNA–Protein interactions for RNA: ENST00000601267.5

C19orf48-213, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 782 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-213ENST00000601267 NISCHQ9Y2I1 1504 aa30.95■■■□□ 2.55
C19orf48-213ENST00000601267 ABCC9O60706 1549 aa28.23■■■□□ 2.11
C19orf48-213ENST00000601267 CCDC180Q9P1Z9 1646 aa27.9■■■□□ 2.06
C19orf48-213ENST00000601267 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
C19orf48-213ENST00000601267 DNAJC5BQ9UF47 199 aa26.65■■□□□ 1.86
C19orf48-213ENST00000601267 NACADO15069 1562 aa26.42■■□□□ 1.82
C19orf48-213ENST00000601267 DCAF8L2P0C7V8 631 aa26.36■■□□□ 1.81
C19orf48-213ENST00000601267 PABPN1Q86U42 306 aaKnown RBP eCLIP26.24■■□□□ 1.79
C19orf48-213ENST00000601267 UNC13AQ9UPW8 1703 aa26.12■■□□□ 1.77
C19orf48-213ENST00000601267 BICRAQ9NZM4 1560 aa25.91■■□□□ 1.74
C19orf48-213ENST00000601267 MYO15BQ96JP2 1530 aa25.9■■□□□ 1.74
C19orf48-213ENST00000601267 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
C19orf48-213ENST00000601267 SCRIBQ14160 1630 aa25.5■■□□□ 1.67
C19orf48-213ENST00000601267 DCAF1Q9Y4B6 1507 aa25.49■■□□□ 1.67
C19orf48-213ENST00000601267 SHROOM4Q9ULL8 1493 aa25.49■■□□□ 1.67
C19orf48-213ENST00000601267 CC2D2AQ9P2K1 1620 aa25.46■■□□□ 1.67
C19orf48-213ENST00000601267 CECR2Q9BXF3 1484 aa25.43■■□□□ 1.66
C19orf48-213ENST00000601267 EIF4G1Q04637 1599 aaKnown RBP25.33■■□□□ 1.65
C19orf48-213ENST00000601267 DNAJC5Q9H3Z4 198 aa24.64■■□□□ 1.54
C19orf48-213ENST00000601267 ERCC6Q03468 1493 aa24.41■■□□□ 1.5
C19orf48-213ENST00000601267 CUX2O14529 1486 aa24.38■■□□□ 1.49
C19orf48-213ENST00000601267 NCAPD3P42695 1498 aa24.37■■□□□ 1.49
C19orf48-213ENST00000601267 ATAD2BQ9ULI0 1458 aa24.3■■□□□ 1.48
C19orf48-213ENST00000601267 SMARCA4P51532 1647 aa24.24■■□□□ 1.47
C19orf48-213ENST00000601267 SMARCA2P51531 1590 aa24.22■■□□□ 1.47
C19orf48-213ENST00000601267 HMGXB3Q12766 1538 aa24.2■■□□□ 1.46
C19orf48-213ENST00000601267 NESP48681 1621 aa24.17■■□□□ 1.46
C19orf48-213ENST00000601267 BAZ1BQ9UIG0 1483 aaKnown RBP24.09■■□□□ 1.45
C19orf48-213ENST00000601267 BAZ1AQ9NRL2 1556 aaPredicted RBP24.06■■□□□ 1.44
C19orf48-213ENST00000601267 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.43
C19orf48-213ENST00000601267 PEG3Q9GZU2 1588 aa23.93■■□□□ 1.42
C19orf48-213ENST00000601267 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
C19orf48-213ENST00000601267 MROH2BQ7Z745 1585 aa23.87■■□□□ 1.41
C19orf48-213ENST00000601267 KIF21AQ7Z4S6 1674 aa23.86■■□□□ 1.41
C19orf48-213ENST00000601267 PDS5BQ9NTI5 1447 aa23.78■■□□□ 1.4
C19orf48-213ENST00000601267 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
C19orf48-213ENST00000601267 MRC2Q9UBG0 1479 aa23.62■■□□□ 1.37
C19orf48-213ENST00000601267 WIZO95785 1651 aa23.6■■□□□ 1.37
C19orf48-213ENST00000601267 TRIM41Q8WV44 630 aa23.59■■□□□ 1.37
C19orf48-213ENST00000601267 WDR62O43379 1518 aa23.54■■□□□ 1.36
C19orf48-213ENST00000601267 CEP164Q9UPV0 1460 aa23.48■■□□□ 1.35
C19orf48-213ENST00000601267 FANCD2Q9BXW9 1451 aa23.42■■□□□ 1.34
C19orf48-213ENST00000601267 CFTRP13569 1480 aa23.31■■□□□ 1.32
C19orf48-213ENST00000601267 TOP2AP11388 1531 aaKnown RBP23.26■■□□□ 1.31
C19orf48-213ENST00000601267 RSF1Q96T23 1441 aaPredicted RBP23.25■■□□□ 1.31
C19orf48-213ENST00000601267 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
C19orf48-213ENST00000601267 OSCARQ8IYS5 282 aa23.22■■□□□ 1.31
C19orf48-213ENST00000601267 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
C19orf48-213ENST00000601267 ZNF608Q9ULD9 1512 aaPredicted RBP23.02■■□□□ 1.28
C19orf48-213ENST00000601267 RIMBP3CA6NJZ7 1639 aa23■■□□□ 1.27
C19orf48-213ENST00000601267 RIMBP3BA6NNM3 1639 aa23■■□□□ 1.27
C19orf48-213ENST00000601267 RIMBP3Q9UFD9 1639 aa23■■□□□ 1.27
C19orf48-213ENST00000601267 CCDC88BA6NC98 1476 aa22.99■■□□□ 1.27
C19orf48-213ENST00000601267 IFT140Q96RY7 1462 aa22.99■■□□□ 1.27
C19orf48-213ENST00000601267 TOPBP1Q92547 1522 aa22.93■■□□□ 1.26
C19orf48-213ENST00000601267 EIF4G3O43432 1585 aaKnown RBP22.89■■□□□ 1.26
C19orf48-213ENST00000601267 ARHGEF11O15085 1522 aa22.88■■□□□ 1.25
C19orf48-213ENST00000601267 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
C19orf48-213ENST00000601267 ABCC8Q09428 1581 aa22.83■■□□□ 1.25
C19orf48-213ENST00000601267 CHD1O14646 1710 aa22.78■■□□□ 1.24
C19orf48-213ENST00000601267 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.24not detected■■■■□ 23.4
C19orf48-213ENST00000601267 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
C19orf48-213ENST00000601267 CYB5RLQ6IPT4 315 aa22.74■■□□□ 1.23
C19orf48-213ENST00000601267 FBLN2P98095 1184 aa22.73■■□□□ 1.23
C19orf48-213ENST00000601267 POLA1P09884 1462 aaPredicted RBP22.69■■□□□ 1.22
C19orf48-213ENST00000601267 ARAP1Q96P48 1450 aa22.64■■□□□ 1.21
C19orf48-213ENST00000601267 RAD54L2Q9Y4B4 1467 aa22.64■■□□□ 1.21
C19orf48-213ENST00000601267 TRHP20396 242 aaPredicted RBP22.62■■□□□ 1.21
C19orf48-213ENST00000601267 TDRD9Q8NDG6 1382 aaKnown RBP22.59■■□□□ 1.21
C19orf48-213ENST00000601267 SOGA1O94964 1423 aa22.57■■□□□ 1.2
C19orf48-213ENST00000601267 SNAPC4Q5SXM2 1469 aa22.54■■□□□ 1.2
C19orf48-213ENST00000601267 FGD5Q6ZNL6 1462 aa22.53■■□□□ 1.2
C19orf48-213ENST00000601267 CHMP7Q8WUX9 453 aaPredicted RBP22.47■■□□□ 1.19
C19orf48-213ENST00000601267 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
C19orf48-213ENST00000601267 CLASP1Q7Z460 1538 aa22.46■■□□□ 1.19
C19orf48-213ENST00000601267 CUX1P39880 1505 aa22.45■■□□□ 1.18
C19orf48-213ENST00000601267 SYNJ1O43426 1573 aa22.45■■□□□ 1.18
C19orf48-213ENST00000601267 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
C19orf48-213ENST00000601267 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
C19orf48-213ENST00000601267 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
C19orf48-213ENST00000601267 PBRM1Q86U86 1689 aa22.36■■□□□ 1.17
C19orf48-213ENST00000601267 GAPVD1Q14C86 1478 aa22.3■■□□□ 1.16
C19orf48-213ENST00000601267 ABCA5Q8WWZ7 1642 aa22.23■■□□□ 1.15
C19orf48-213ENST00000601267 ABCA10Q8WWZ4 1543 aa22.21■■□□□ 1.15
C19orf48-213ENST00000601267 AEBP2Q6ZN18 517 aaPredicted RBP22.17■■□□□ 1.14
C19orf48-213ENST00000601267 ERCC6L2Q5T890 1561 aa22.13■■□□□ 1.13
C19orf48-213ENST00000601267 SUPT5HO00267 1087 aaKnown RBP22.13■■□□□ 1.13
C19orf48-213ENST00000601267 GRIN2AQ12879 1464 aa22.13■■□□□ 1.13
C19orf48-213ENST00000601267 ADAMTS12P58397 1594 aa22.11■■□□□ 1.13
C19orf48-213ENST00000601267 WRNQ14191 1432 aaPredicted RBP eCLIP22.08■■□□□ 1.13
C19orf48-213ENST00000601267 CEP170Q5SW79 1584 aa22.08■■□□□ 1.12
C19orf48-213ENST00000601267 NUP160Q12769 1436 aa22.03■■□□□ 1.12
C19orf48-213ENST00000601267 BIVM-ERCC5R4GMW8 1640 aa22.02■■□□□ 1.11
C19orf48-213ENST00000601267 TOP2BQ02880 1626 aa22.01■■□□□ 1.11
C19orf48-213ENST00000601267 FHAD1B1AJZ9 1412 aa21.99■■□□□ 1.11
C19orf48-213ENST00000601267 SHROOM2Q13796 1616 aa21.98■■□□□ 1.11
C19orf48-213ENST00000601267 ERICH3Q5RHP9 1530 aa21.93■■□□□ 1.1
C19orf48-213ENST00000601267 PRG4Q92954 1404 aaPredicted RBP21.89■■□□□ 1.09
C19orf48-213ENST00000601267 KIF13AQ9H1H9 1805 aa21.86■■□□□ 1.09
C19orf48-213ENST00000601267 JPH4Q96JJ6 628 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms