RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 FAM135AQ9P2D6 1515 aa24.15■■□□□ 1.46
XRCC1-209ENST00000599693 KDM5DQ9BY66 1539 aa24.14■■□□□ 1.45
XRCC1-209ENST00000599693 CCDC141Q6ZP82 1450 aa24.13■■□□□ 1.45
XRCC1-209ENST00000599693 NEURL4Q96JN8 1562 aa24.12■■□□□ 1.45
XRCC1-209ENST00000599693 TNRQ92752 1358 aa24.12■■□□□ 1.45
XRCC1-209ENST00000599693 PZPP20742 1482 aa24.12■■□□□ 1.45
XRCC1-209ENST00000599693 CAMSAP2Q08AD1 1489 aa24.09■■□□□ 1.45
XRCC1-209ENST00000599693 KIF3BO15066 747 aa24.08■■□□□ 1.45
XRCC1-209ENST00000599693 CPS1P31327 1500 aa24.08■■□□□ 1.45
XRCC1-209ENST00000599693 NCOA2Q15596 1464 aa24.07■■□□□ 1.44
XRCC1-209ENST00000599693 FBXO31Q5XUX0 539 aaPredicted RBP24.06■■□□□ 1.44
XRCC1-209ENST00000599693 SHANK2Q9UPX8 1470 aa24.04■■□□□ 1.44
XRCC1-209ENST00000599693 ARHGEF5Q12774 1597 aa24.03■■□□□ 1.44
XRCC1-209ENST00000599693 RSPH4AQ5TD94 716 aa24.02■■□□□ 1.44
XRCC1-209ENST00000599693 WASHC2CQ9Y4E1 1318 aa24.02■■□□□ 1.44
XRCC1-209ENST00000599693 NLRP1Q9C000 1473 aa24.01■■□□□ 1.43
XRCC1-209ENST00000599693 VWDEQ8N2E2 1590 aa24■■□□□ 1.43
XRCC1-209ENST00000599693 DEPDC5O75140 1603 aa24■■□□□ 1.43
XRCC1-209ENST00000599693 MIA2Q96PC5 1412 aa24■■□□□ 1.43
XRCC1-209ENST00000599693 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.99■■□□□ 1.43
XRCC1-209ENST00000599693 UGGT1Q9NYU2 1555 aa23.99■■□□□ 1.43
XRCC1-209ENST00000599693 ANKLE2Q86XL3 938 aa23.98■■□□□ 1.43
XRCC1-209ENST00000599693 SCAF1Q9H7N4 1312 aaKnown RBP23.98■■□□□ 1.43
XRCC1-209ENST00000599693 MED1Q15648 1581 aaPredicted RBP23.98■■□□□ 1.43
XRCC1-209ENST00000599693 MED14O60244 1454 aa23.97■■□□□ 1.43
XRCC1-209ENST00000599693 TOM1O60784 492 aa23.97■■□□□ 1.43
XRCC1-209ENST00000599693 HSPA1LP34931 641 aa23.97■■□□□ 1.43
XRCC1-209ENST00000599693 THEMISQ8N1K5 641 aaPredicted RBP23.97■■□□□ 1.43
XRCC1-209ENST00000599693 RNF17Q9BXT8 1623 aaKnown RBP23.97■■□□□ 1.43
XRCC1-209ENST00000599693 PIP4K2BP78356 416 aa23.96■■□□□ 1.43
XRCC1-209ENST00000599693 NPHP4O75161 1426 aaPredicted RBP23.95■■□□□ 1.42
XRCC1-209ENST00000599693 ZC3H13Q5T200 1668 aaKnown RBP23.95■■□□□ 1.42
XRCC1-209ENST00000599693 IQGAP1P46940 1657 aa23.93■■□□□ 1.42
XRCC1-209ENST00000599693 TSPY4P0CV99 314 aa23.93■■□□□ 1.42
XRCC1-209ENST00000599693 TSPY10P0CW01 314 aa23.93■■□□□ 1.42
XRCC1-209ENST00000599693 MAST1Q9Y2H9 1570 aa23.92■■□□□ 1.42
XRCC1-209ENST00000599693 ABCC3O15438 1527 aa23.92■■□□□ 1.42
XRCC1-209ENST00000599693 EIF2AK4Q9P2K8 1649 aaKnown RBP23.91■■□□□ 1.42
XRCC1-209ENST00000599693 ALKQ9UM73 1620 aa23.9■■□□□ 1.42
XRCC1-209ENST00000599693 ERVK-7P63135 1459 aa23.87■■□□□ 1.41
XRCC1-209ENST00000599693 LRRC9Q6ZRR7 1453 aa23.87■■□□□ 1.41
XRCC1-209ENST00000599693 STRCP1A6NGW2 1772 aa23.86■■□□□ 1.41
XRCC1-209ENST00000599693 MROH1Q8NDA8 1641 aa23.86■■□□□ 1.41
XRCC1-209ENST00000599693 SYNMO15061 1565 aa23.86■■□□□ 1.41
XRCC1-209ENST00000599693 CEP152O94986 1710 aa23.83■■□□□ 1.41
XRCC1-209ENST00000599693 LRRC7Q96NW7 1537 aa23.82■■□□□ 1.4
XRCC1-209ENST00000599693 UBR1Q8IWV7 1749 aa23.81■■□□□ 1.4
XRCC1-209ENST00000599693 VPS8Q8N3P4 1428 aa23.81■■□□□ 1.4
XRCC1-209ENST00000599693 DUOX2Q9NRD8 1548 aa23.78■■□□□ 1.4
XRCC1-209ENST00000599693 MYOM3Q5VTT5 1437 aa23.76■■□□□ 1.39
XRCC1-209ENST00000599693 SCAF11Q99590 1463 aaKnown RBP23.76■■□□□ 1.39
XRCC1-209ENST00000599693 CFAP65Q6ZU64 1925 aaKnown RBP23.76■■□□□ 1.39
XRCC1-209ENST00000599693 MAP3K1Q13233 1512 aa23.75■■□□□ 1.39
XRCC1-209ENST00000599693 PHF23Q9BUL5 403 aaPredicted RBP23.75■■□□□ 1.39
XRCC1-209ENST00000599693 PRDM15P57071 1507 aaPredicted RBP23.74■■□□□ 1.39
XRCC1-209ENST00000599693 ARHGAP23Q9P227 1491 aa23.73■■□□□ 1.39
XRCC1-209ENST00000599693 SLIT1O75093 1534 aa23.73■■□□□ 1.39
XRCC1-209ENST00000599693 ARHGAP31Q2M1Z3 1444 aa23.71■■□□□ 1.39
XRCC1-209ENST00000599693 CROCC2H7BZ55 1655 aa23.7■■□□□ 1.39
XRCC1-209ENST00000599693 KANK4Q5T7N3 995 aaPredicted RBP23.7■■□□□ 1.38
XRCC1-209ENST00000599693 ERBINQ96RT1 1412 aa23.68■■□□□ 1.38
XRCC1-209ENST00000599693 KIF15Q9NS87 1388 aa23.68■■□□□ 1.38
XRCC1-209ENST00000599693 LTKP29376 864 aa23.67■■□□□ 1.38
XRCC1-209ENST00000599693 SENP3Q9H4L4 574 aaPredicted RBP23.67■■□□□ 1.38
XRCC1-209ENST00000599693 XIRP1Q702N8 1843 aaKnown RBP23.67■■□□□ 1.38
XRCC1-209ENST00000599693 PIK3C2BO00750 1634 aa23.66■■□□□ 1.38
XRCC1-209ENST00000599693 TXNDC2Q86VQ3 553 aa23.65■■□□□ 1.38
XRCC1-209ENST00000599693 ABCC5O15440 1437 aa23.63■■□□□ 1.37
XRCC1-209ENST00000599693 PTPN23Q9H3S7 1636 aa23.62■■□□□ 1.37
XRCC1-209ENST00000599693 EID1Q9Y6B2 187 aa23.62■■□□□ 1.37
XRCC1-209ENST00000599693 KDM5AP29375 1690 aaKnown RBP23.61■■□□□ 1.37
XRCC1-209ENST00000599693 RRP7BPQ9NSQ0 103 aa23.6■■□□□ 1.37
XRCC1-209ENST00000599693 TMEM2Q9UHN6 1383 aa23.6■■□□□ 1.37
XRCC1-209ENST00000599693 KANK1Q14678 1352 aa23.58■■□□□ 1.37
XRCC1-209ENST00000599693 LOC105371045A0A1W2PR82 267 aa23.58■■□□□ 1.37
XRCC1-209ENST00000599693 EFCAB6Q5THR3 1501 aa23.58■■□□□ 1.36
XRCC1-209ENST00000599693 DAPK1P53355 1430 aa23.58■■□□□ 1.36
XRCC1-209ENST00000599693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.57■■□□□ 1.36
XRCC1-209ENST00000599693 LMTK2Q8IWU2 1503 aa23.57■■□□□ 1.36
XRCC1-209ENST00000599693 FAM135BQ49AJ0 1406 aa23.54■■□□□ 1.36
XRCC1-209ENST00000599693 STAG3Q9UJ98 1225 aa23.54■■□□□ 1.36
XRCC1-209ENST00000599693 TMEM94Q12767 1356 aa23.52■■□□□ 1.36
XRCC1-209ENST00000599693 FGD6Q6ZV73 1430 aa23.51■■□□□ 1.35
XRCC1-209ENST00000599693 TET3O43151 1660 aa23.51■■□□□ 1.35
XRCC1-209ENST00000599693 RGS17Q9UGC6 210 aaPredicted RBP23.51■■□□□ 1.35
XRCC1-209ENST00000599693 ADGRB3O60242 1522 aa23.5■■□□□ 1.35
XRCC1-209ENST00000599693 ANKRD30AQ9BXX3 1397 aa23.5■■□□□ 1.35
XRCC1-209ENST00000599693 IDI1Q13907 227 aa23.49■■□□□ 1.35
XRCC1-209ENST00000599693 NOS1P29475 1434 aa23.49■■□□□ 1.35
XRCC1-209ENST00000599693 ROBO1Q9Y6N7 1651 aa23.48■■□□□ 1.35
XRCC1-209ENST00000599693 KCNA6P17658 529 aa23.48■■□□□ 1.35
XRCC1-209ENST00000599693 NWD1Q149M9 1564 aa23.48■■□□□ 1.35
XRCC1-209ENST00000599693 NKTRP30414 1462 aaKnown RBP23.46■■□□□ 1.35
XRCC1-209ENST00000599693 APLP2Q06481 763 aa23.44■■□□□ 1.34
XRCC1-209ENST00000599693 SLC26A8Q96RN1 970 aa23.44■■□□□ 1.34
XRCC1-209ENST00000599693 CHIC2Q9UKJ5 165 aa23.44■■□□□ 1.34
XRCC1-209ENST00000599693 PROSER2Q86WR7 435 aaPredicted RBP23.43■■□□□ 1.34
XRCC1-209ENST00000599693 ADGRL2O95490 1459 aa23.42■■□□□ 1.34
XRCC1-209ENST00000599693 RPRD2Q5VT52 1461 aaKnown RBP23.39■■□□□ 1.34
XRCC1-209ENST00000599693 RBM33Q96EV2 1170 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms