RNA–Protein interactions for RNA: ENST00000597147.1

COLGALT1-204, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS ALT2 TSL 5

Gene COLGALT1, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-204ENST00000597147 NCOA2Q15596 1464 aa21.77■■□□□ 1.07
COLGALT1-204ENST00000597147 A2ML1A8K2U0 1454 aa21.76■■□□□ 1.07
COLGALT1-204ENST00000597147 ZNF335Q9H4Z2 1342 aaPredicted RBP21.76■■□□□ 1.07
COLGALT1-204ENST00000597147 KDM5DQ9BY66 1539 aa21.75■■□□□ 1.07
COLGALT1-204ENST00000597147 FAM135AQ9P2D6 1515 aa21.75■■□□□ 1.07
COLGALT1-204ENST00000597147 KANK4Q5T7N3 995 aaPredicted RBP21.73■■□□□ 1.07
COLGALT1-204ENST00000597147 ARHGEF5Q12774 1597 aa21.71■■□□□ 1.07
COLGALT1-204ENST00000597147 KIF3BO15066 747 aa21.71■■□□□ 1.07
COLGALT1-204ENST00000597147 ILDR2Q71H61 639 aa21.7■■□□□ 1.06
COLGALT1-204ENST00000597147 PZPP20742 1482 aa21.7■■□□□ 1.06
COLGALT1-204ENST00000597147 RSPH4AQ5TD94 716 aa21.69■■□□□ 1.06
COLGALT1-204ENST00000597147 TNRQ92752 1358 aa21.68■■□□□ 1.06
COLGALT1-204ENST00000597147 LRRC9Q6ZRR7 1453 aa21.68■■□□□ 1.06
COLGALT1-204ENST00000597147 MAP3K1Q13233 1512 aa21.67■■□□□ 1.06
COLGALT1-204ENST00000597147 UBAP1LF5GYI3 381 aa21.67■■□□□ 1.06
COLGALT1-204ENST00000597147 NEURL4Q96JN8 1562 aa21.66■■□□□ 1.06
COLGALT1-204ENST00000597147 WASHC2CQ9Y4E1 1318 aa21.65■■□□□ 1.06
COLGALT1-204ENST00000597147 FBXO31Q5XUX0 539 aaPredicted RBP21.65■■□□□ 1.06
COLGALT1-204ENST00000597147 ZC3H13Q5T200 1668 aaKnown RBP21.63■■□□□ 1.05
COLGALT1-204ENST00000597147 RNF17Q9BXT8 1623 aaKnown RBP21.63■■□□□ 1.05
COLGALT1-204ENST00000597147 SOCS7O14512 581 aa21.62■■□□□ 1.05
COLGALT1-204ENST00000597147 TSPY4P0CV99 314 aa21.62■■□□□ 1.05
COLGALT1-204ENST00000597147 TSPY10P0CW01 314 aa21.62■■□□□ 1.05
COLGALT1-204ENST00000597147 MAST1Q9Y2H9 1570 aa21.61■■□□□ 1.05
COLGALT1-204ENST00000597147 NLRP1Q9C000 1473 aa21.6■■□□□ 1.05
COLGALT1-204ENST00000597147 EIF2AK4Q9P2K8 1649 aaKnown RBP21.6■■□□□ 1.05
COLGALT1-204ENST00000597147 UGGT1Q9NYU2 1555 aa21.6■■□□□ 1.05
COLGALT1-204ENST00000597147 CPS1P31327 1500 aa21.6■■□□□ 1.05
COLGALT1-204ENST00000597147 DEPDC5O75140 1603 aa21.58■■□□□ 1.05
COLGALT1-204ENST00000597147 MIA2Q96PC5 1412 aa21.58■■□□□ 1.05
COLGALT1-204ENST00000597147 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.57■■□□□ 1.043e-7■■□□□ 13.5
COLGALT1-204ENST00000597147 SHANK2Q9UPX8 1470 aa21.57■■□□□ 1.04
COLGALT1-204ENST00000597147 CFAP65Q6ZU64 1925 aaKnown RBP21.57■■□□□ 1.04
COLGALT1-204ENST00000597147 CEP152O94986 1710 aa21.56■■□□□ 1.04
COLGALT1-204ENST00000597147 ANKLE2Q86XL3 938 aa21.56■■□□□ 1.04
COLGALT1-204ENST00000597147 THEMISQ8N1K5 641 aaPredicted RBP21.56■■□□□ 1.04
COLGALT1-204ENST00000597147 ABCC3O15438 1527 aa21.55■■□□□ 1.04
COLGALT1-204ENST00000597147 IQGAP1P46940 1657 aa21.55■■□□□ 1.04
COLGALT1-204ENST00000597147 VWDEQ8N2E2 1590 aa21.53■■□□□ 1.04
COLGALT1-204ENST00000597147 MED14O60244 1454 aa21.52■■□□□ 1.04
COLGALT1-204ENST00000597147 MROH1Q8NDA8 1641 aa21.52■■□□□ 1.04
COLGALT1-204ENST00000597147 SCAF1Q9H7N4 1312 aaKnown RBP21.52■■□□□ 1.03
COLGALT1-204ENST00000597147 NPHP4O75161 1426 aaPredicted RBP21.51■■□□□ 1.03
COLGALT1-204ENST00000597147 MYOM3Q5VTT5 1437 aa21.51■■□□□ 1.03
COLGALT1-204ENST00000597147 TOM1O60784 492 aa21.49■■□□□ 1.03
COLGALT1-204ENST00000597147 ERVK-7P63135 1459 aa21.49■■□□□ 1.03
COLGALT1-204ENST00000597147 CROCC2H7BZ55 1655 aa21.49■■□□□ 1.03
COLGALT1-204ENST00000597147 PIP4K2BP78356 416 aa21.48■■□□□ 1.03
COLGALT1-204ENST00000597147 UBR1Q8IWV7 1749 aa21.48■■□□□ 1.03
COLGALT1-204ENST00000597147 DUOX2Q9NRD8 1548 aa21.48■■□□□ 1.03
COLGALT1-204ENST00000597147 STRCP1A6NGW2 1772 aa21.47■■□□□ 1.03
COLGALT1-204ENST00000597147 HSPA1LP34931 641 aa21.44■■□□□ 1.02
COLGALT1-204ENST00000597147 SYNMO15061 1565 aa21.44■■□□□ 1.02
COLGALT1-204ENST00000597147 MED1Q15648 1581 aaPredicted RBP21.43■■□□□ 1.02
COLGALT1-204ENST00000597147 PRDM15P57071 1507 aaPredicted RBP21.42■■□□□ 1.02
COLGALT1-204ENST00000597147 PTPN23Q9H3S7 1636 aa21.4■■□□□ 1.02
COLGALT1-204ENST00000597147 ALKQ9UM73 1620 aa21.4■■□□□ 1.02
COLGALT1-204ENST00000597147 ERBINQ96RT1 1412 aa21.38■■□□□ 1.01
COLGALT1-204ENST00000597147 KIF15Q9NS87 1388 aa21.38■■□□□ 1.01
COLGALT1-204ENST00000597147 LRRC7Q96NW7 1537 aa21.38■■□□□ 1.01
COLGALT1-204ENST00000597147 SCAF11Q99590 1463 aaKnown RBP21.37■■□□□ 1.01
COLGALT1-204ENST00000597147 FGD6Q6ZV73 1430 aa21.36■■□□□ 1.01
COLGALT1-204ENST00000597147 PIK3C2BO00750 1634 aa21.35■■□□□ 1.01
COLGALT1-204ENST00000597147 ABCC5O15440 1437 aa21.35■■□□□ 1.01
COLGALT1-204ENST00000597147 ARHGAP31Q2M1Z3 1444 aa21.35■■□□□ 1.01
COLGALT1-204ENST00000597147 SLIT1O75093 1534 aa21.34■■□□□ 1.01
COLGALT1-204ENST00000597147 FAM50AQ14320 339 aaKnown RBP21.34■■□□□ 1.01
COLGALT1-204ENST00000597147 ARHGAP23Q9P227 1491 aa21.33■■□□□ 1.01
COLGALT1-204ENST00000597147 XIRP1Q702N8 1843 aaKnown RBP21.32■■□□□ 1
COLGALT1-204ENST00000597147 DAPK1P53355 1430 aa21.32■■□□□ 1
COLGALT1-204ENST00000597147 RRP7BPQ9NSQ0 103 aa21.32■■□□□ 1
COLGALT1-204ENST00000597147 KDM5AP29375 1690 aaKnown RBP21.31■■□□□ 1
COLGALT1-204ENST00000597147 KANK1Q14678 1352 aa21.3■■□□□ 1
COLGALT1-204ENST00000597147 TXNDC2Q86VQ3 553 aa21.29■■□□□ 1
COLGALT1-204ENST00000597147 PPARGC1BQ86YN6 1023 aaKnown RBP21.29■■□□□ 1
COLGALT1-204ENST00000597147 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.29■■□□□ 1
COLGALT1-204ENST00000597147 CHIC2Q9UKJ5 165 aa21.29■■□□□ 1
COLGALT1-204ENST00000597147 LTKP29376 864 aa21.28■■□□□ 1
COLGALT1-204ENST00000597147 EID1Q9Y6B2 187 aa21.27■■□□□ 1
COLGALT1-204ENST00000597147 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
COLGALT1-204ENST00000597147 EFCAB6Q5THR3 1501 aa21.24■□□□□ 0.99
COLGALT1-204ENST00000597147 LMTK2Q8IWU2 1503 aa21.24■□□□□ 0.99
COLGALT1-204ENST00000597147 ANKRD30AQ9BXX3 1397 aa21.24■□□□□ 0.99
COLGALT1-204ENST00000597147 PHF23Q9BUL5 403 aaPredicted RBP21.24■□□□□ 0.99
COLGALT1-204ENST00000597147 STAG3Q9UJ98 1225 aa21.23■□□□□ 0.99
COLGALT1-204ENST00000597147 TMEM2Q9UHN6 1383 aa21.23■□□□□ 0.99
COLGALT1-204ENST00000597147 ADGRB3O60242 1522 aa21.19■□□□□ 0.98
COLGALT1-204ENST00000597147 IDI1Q13907 227 aa21.17■□□□□ 0.98
COLGALT1-204ENST00000597147 MYO5BQ9ULV0 1848 aa21.16■□□□□ 0.98
COLGALT1-204ENST00000597147 ADGRL2O95490 1459 aa21.16■□□□□ 0.98
COLGALT1-204ENST00000597147 TET3O43151 1660 aa21.15■□□□□ 0.98
COLGALT1-204ENST00000597147 NOS1P29475 1434 aa21.15■□□□□ 0.98
COLGALT1-204ENST00000597147 GCC2Q8IWJ2 1684 aa21.12■□□□□ 0.97
COLGALT1-204ENST00000597147 ITGAEP38570 1179 aa21.12■□□□□ 0.97
COLGALT1-204ENST00000597147 ROBO1Q9Y6N7 1651 aa21.12■□□□□ 0.97
COLGALT1-204ENST00000597147 TMEM94Q12767 1356 aa21.11■□□□□ 0.97
COLGALT1-204ENST00000597147 NWD1Q149M9 1564 aa21.11■□□□□ 0.97
COLGALT1-204ENST00000597147 RPRD2Q5VT52 1461 aaKnown RBP21.11■□□□□ 0.97
COLGALT1-204ENST00000597147 KCNA6P17658 529 aa21.1■□□□□ 0.97
COLGALT1-204ENST00000597147 SLC26A8Q96RN1 970 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms