RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 FGD6Q6ZV73 1430 aa25.36■■□□□ 1.65
GCDH-213ENST00000590627 RRBP1Q9P2E9 1410 aaKnown RBP25.36■■□□□ 1.65
GCDH-213ENST00000590627 IQSEC2Q5JU85 1478 aa25.35■■□□□ 1.65
GCDH-213ENST00000590627 FAM135AQ9P2D6 1515 aa25.33■■□□□ 1.65
GCDH-213ENST00000590627 PKD2Q13563 968 aa25.32■■□□□ 1.64
GCDH-213ENST00000590627 ARHGEF5Q12774 1597 aa25.31■■□□□ 1.64
GCDH-213ENST00000590627 TCOF1Q13428 1488 aaKnown RBP25.3■■□□□ 1.64
GCDH-213ENST00000590627 NCKAP5LQ9HCH0 1330 aa25.3■■□□□ 1.64
GCDH-213ENST00000590627 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.29■■□□□ 1.64
GCDH-213ENST00000590627 KIF3BO15066 747 aa25.28■■□□□ 1.64
GCDH-213ENST00000590627 A2ML1A8K2U0 1454 aa25.28■■□□□ 1.64
GCDH-213ENST00000590627 KDM5DQ9BY66 1539 aa25.27■■□□□ 1.64
GCDH-213ENST00000590627 TSPY4P0CV99 314 aa25.25■■□□□ 1.63
GCDH-213ENST00000590627 TSPY10P0CW01 314 aa25.25■■□□□ 1.63
GCDH-213ENST00000590627 PTPN23Q9H3S7 1636 aa25.25■■□□□ 1.63
GCDH-213ENST00000590627 DNMT1P26358 1616 aaKnown RBP25.24■■□□□ 1.63
GCDH-213ENST00000590627 PZPP20742 1482 aa25.24■■□□□ 1.63
GCDH-213ENST00000590627 TRIM26Q12899 539 aaPredicted RBP25.24■■□□□ 1.63
GCDH-213ENST00000590627 TNRQ92752 1358 aa25.2■■□□□ 1.63
GCDH-213ENST00000590627 ZNF335Q9H4Z2 1342 aaPredicted RBP25.2■■□□□ 1.62
GCDH-213ENST00000590627 WASHC2CQ9Y4E1 1318 aa25.2■■□□□ 1.62
GCDH-213ENST00000590627 MAST1Q9Y2H9 1570 aa25.19■■□□□ 1.62
GCDH-213ENST00000590627 FAM50AQ14320 339 aaKnown RBP25.18■■□□□ 1.62
GCDH-213ENST00000590627 FBXO31Q5XUX0 539 aaPredicted RBP25.18■■□□□ 1.62
GCDH-213ENST00000590627 RNF17Q9BXT8 1623 aaKnown RBP25.14■■□□□ 1.61
GCDH-213ENST00000590627 POLR1AO95602 1720 aaPredicted RBP25.14■■□□□ 1.61
GCDH-213ENST00000590627 NLRP1Q9C000 1473 aa25.13■■□□□ 1.61
GCDH-213ENST00000590627 DISP3Q9P2K9 1392 aa25.12■■□□□ 1.61
GCDH-213ENST00000590627 EIF2AK4Q9P2K8 1649 aaKnown RBP25.12■■□□□ 1.61
GCDH-213ENST00000590627 ZC3H13Q5T200 1668 aaKnown RBP25.11■■□□□ 1.61
GCDH-213ENST00000590627 NEURL4Q96JN8 1562 aa25.1■■□□□ 1.61
GCDH-213ENST00000590627 THEMISQ8N1K5 641 aaPredicted RBP25.09■■□□□ 1.61
GCDH-213ENST00000590627 ABCC3O15438 1527 aa25.07■■□□□ 1.6
GCDH-213ENST00000590627 UGGT1Q9NYU2 1555 aa25.07■■□□□ 1.6
GCDH-213ENST00000590627 ABCC5O15440 1437 aa25.07■■□□□ 1.6
GCDH-213ENST00000590627 DAPK1P53355 1430 aa25.06■■□□□ 1.6
GCDH-213ENST00000590627 UBAP1LF5GYI3 381 aa25.06■■□□□ 1.6
GCDH-213ENST00000590627 ANKLE2Q86XL3 938 aa25.06■■□□□ 1.6
GCDH-213ENST00000590627 SPATA31D1Q6ZQQ2 1576 aa25.05■■□□□ 1.6
GCDH-213ENST00000590627 CPS1P31327 1500 aa25.03■■□□□ 1.6
GCDH-213ENST00000590627 DUOX2Q9NRD8 1548 aa25.03■■□□□ 1.6
GCDH-213ENST00000590627 DEPDC5O75140 1603 aa25.03■■□□□ 1.6
GCDH-213ENST00000590627 MROH1Q8NDA8 1641 aa25.03■■□□□ 1.6
GCDH-213ENST00000590627 MED14O60244 1454 aa25.02■■□□□ 1.6
GCDH-213ENST00000590627 SHANK2Q9UPX8 1470 aa25.01■■□□□ 1.59
GCDH-213ENST00000590627 ERVK-7P63135 1459 aa24.99■■□□□ 1.59
GCDH-213ENST00000590627 NPHP4O75161 1426 aaPredicted RBP24.98■■□□□ 1.59
GCDH-213ENST00000590627 ITGAEP38570 1179 aa24.98■■□□□ 1.59
GCDH-213ENST00000590627 ILDR2Q71H61 639 aa24.97■■□□□ 1.59
GCDH-213ENST00000590627 PCGF6Q9BYE7 350 aa24.97■■□□□ 1.59
GCDH-213ENST00000590627 CEP152O94986 1710 aa24.97■■□□□ 1.59
GCDH-213ENST00000590627 CROCC2H7BZ55 1655 aa24.97■■□□□ 1.59
GCDH-213ENST00000590627 VWDEQ8N2E2 1590 aa24.96■■□□□ 1.59
GCDH-213ENST00000590627 ERBINQ96RT1 1412 aa24.95■■□□□ 1.58
GCDH-213ENST00000590627 ROCK1Q13464 1354 aa24.94■■□□□ 1.58
GCDH-213ENST00000590627 KIF15Q9NS87 1388 aa24.94■■□□□ 1.58
GCDH-213ENST00000590627 PRDM15P57071 1507 aaPredicted RBP24.94■■□□□ 1.58
GCDH-213ENST00000590627 IQGAP1P46940 1657 aa24.94■■□□□ 1.58
GCDH-213ENST00000590627 ADGRL2O95490 1459 aa24.93■■□□□ 1.58
GCDH-213ENST00000590627 ARHGAP31Q2M1Z3 1444 aa24.92■■□□□ 1.58
GCDH-213ENST00000590627 TOM1O60784 492 aa24.91■■□□□ 1.58
GCDH-213ENST00000590627 CFAP65Q6ZU64 1925 aaKnown RBP24.9■■□□□ 1.58
GCDH-213ENST00000590627 UBR1Q8IWV7 1749 aa24.89■■□□□ 1.58
GCDH-213ENST00000590627 SOCS7O14512 581 aa24.89■■□□□ 1.58
GCDH-213ENST00000590627 CHIC2Q9UKJ5 165 aa24.89■■□□□ 1.58
GCDH-213ENST00000590627 ANKRD30AQ9BXX3 1397 aa24.88■■□□□ 1.57
GCDH-213ENST00000590627 RRP7BPQ9NSQ0 103 aa24.87■■□□□ 1.57
GCDH-213ENST00000590627 HFM1A2PYH4 1435 aa24.85■■□□□ 1.57
GCDH-213ENST00000590627 PIP4K2BP78356 416 aa24.83■■□□□ 1.57
GCDH-213ENST00000590627 SCAF1Q9H7N4 1312 aaKnown RBP24.83■■□□□ 1.56
GCDH-213ENST00000590627 SCAF11Q99590 1463 aaKnown RBP24.83■■□□□ 1.56
GCDH-213ENST00000590627 ARHGAP23Q9P227 1491 aa24.83■■□□□ 1.56
GCDH-213ENST00000590627 KANK1Q14678 1352 aa24.82■■□□□ 1.56
GCDH-213ENST00000590627 SLIT1O75093 1534 aa24.82■■□□□ 1.56
GCDH-213ENST00000590627 NAIPQ13075 1403 aa24.81■■□□□ 1.56
GCDH-213ENST00000590627 SYNMO15061 1565 aa24.8■■□□□ 1.56
GCDH-213ENST00000590627 STRCP1A6NGW2 1772 aa24.8■■□□□ 1.56
GCDH-213ENST00000590627 HSPA1LP34931 641 aa24.8■■□□□ 1.56
GCDH-213ENST00000590627 LMTK2Q8IWU2 1503 aa24.8■■□□□ 1.56
GCDH-213ENST00000590627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.79■■□□□ 1.56
GCDH-213ENST00000590627 LRRC7Q96NW7 1537 aa24.79■■□□□ 1.56
GCDH-213ENST00000590627 SETD5Q9C0A6 1442 aa24.78■■□□□ 1.56
GCDH-213ENST00000590627 ALKQ9UM73 1620 aa24.77■■□□□ 1.56
GCDH-213ENST00000590627 PIK3C2BO00750 1634 aa24.76■■□□□ 1.55
GCDH-213ENST00000590627 LTKP29376 864 aa24.76■■□□□ 1.55
GCDH-213ENST00000590627 TXNDC2Q86VQ3 553 aa24.76■■□□□ 1.55
GCDH-213ENST00000590627 KDM5AP29375 1690 aaKnown RBP24.75■■□□□ 1.55
GCDH-213ENST00000590627 GCC2Q8IWJ2 1684 aa24.75■■□□□ 1.55
GCDH-213ENST00000590627 EID1Q9Y6B2 187 aa24.74■■□□□ 1.55
GCDH-213ENST00000590627 HRCP23327 699 aa24.73■■□□□ 1.55
GCDH-213ENST00000590627 TMEM2Q9UHN6 1383 aa24.72■■□□□ 1.55
GCDH-213ENST00000590627 ANKRD50Q9ULJ7 1429 aa24.71■■□□□ 1.55
GCDH-213ENST00000590627 STAG3Q9UJ98 1225 aa24.7■■□□□ 1.54
GCDH-213ENST00000590627 RAB3GAP2Q9H2M9 1393 aa24.69■■□□□ 1.54
GCDH-213ENST00000590627 MED1Q15648 1581 aaPredicted RBP24.69■■□□□ 1.54
GCDH-213ENST00000590627 EFCAB6Q5THR3 1501 aa24.69■■□□□ 1.54
GCDH-213ENST00000590627 NOS1P29475 1434 aa24.68■■□□□ 1.54
GCDH-213ENST00000590627 IDI1Q13907 227 aa24.67■■□□□ 1.54
GCDH-213ENST00000590627 ACIN1Q9UKV3 1341 aaKnown RBP24.66■■□□□ 1.54
GCDH-213ENST00000590627 RPRD2Q5VT52 1461 aaKnown RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms