RNA–Protein interactions for RNA: ENST00000589737.5

POLR2E-206, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-206ENST00000589737 SOCS7O14512 581 aa24.23■■□□□ 1.47
POLR2E-206ENST00000589737 PKD2Q13563 968 aa24.23■■□□□ 1.47
POLR2E-206ENST00000589737 PZPP20742 1482 aa24.22■■□□□ 1.47
POLR2E-206ENST00000589737 ZNF335Q9H4Z2 1342 aaPredicted RBP24.21■■□□□ 1.47
POLR2E-206ENST00000589737 NEURL4Q96JN8 1562 aa24.2■■□□□ 1.47
POLR2E-206ENST00000589737 DISP3Q9P2K9 1392 aa24.19■■□□□ 1.46
POLR2E-206ENST00000589737 RNF17Q9BXT8 1623 aaKnown RBP24.19■■□□□ 1.46
POLR2E-206ENST00000589737 ILDR2Q71H61 639 aa24.18■■□□□ 1.46
POLR2E-206ENST00000589737 MAST1Q9Y2H9 1570 aa24.17■■□□□ 1.46
POLR2E-206ENST00000589737 ZC3H13Q5T200 1668 aaKnown RBP24.16■■□□□ 1.46
POLR2E-206ENST00000589737 LRRC9Q6ZRR7 1453 aa24.16■■□□□ 1.46
POLR2E-206ENST00000589737 RSPH4AQ5TD94 716 aa24.16■■□□□ 1.46
POLR2E-206ENST00000589737 VPS8Q8N3P4 1428 aa24.16■■□□□ 1.46
POLR2E-206ENST00000589737 TNRQ92752 1358 aa24.16■■□□□ 1.46
POLR2E-206ENST00000589737 KIF3BO15066 747 aa24.15■■□□□ 1.46
POLR2E-206ENST00000589737 EIF2AK4Q9P2K8 1649 aaKnown RBP24.13■■□□□ 1.45
POLR2E-206ENST00000589737 FBXO31Q5XUX0 539 aaPredicted RBP24.1■■□□□ 1.45
POLR2E-206ENST00000589737 NLRP1Q9C000 1473 aa24.1■■□□□ 1.45
POLR2E-206ENST00000589737 MAP3K1Q13233 1512 aa24.1■■□□□ 1.45
POLR2E-206ENST00000589737 DEPDC5O75140 1603 aa24.09■■□□□ 1.45
POLR2E-206ENST00000589737 MROH1Q8NDA8 1641 aa24.09■■□□□ 1.45
POLR2E-206ENST00000589737 ABCC3O15438 1527 aa24.08■■□□□ 1.45
POLR2E-206ENST00000589737 CPS1P31327 1500 aa24.07■■□□□ 1.44
POLR2E-206ENST00000589737 UGGT1Q9NYU2 1555 aa24.07■■□□□ 1.44
POLR2E-206ENST00000589737 WASHC2CQ9Y4E1 1318 aa24.07■■□□□ 1.44
POLR2E-206ENST00000589737 CEP152O94986 1710 aa24.07■■□□□ 1.44
POLR2E-206ENST00000589737 MIA2Q96PC5 1412 aa24.05■■□□□ 1.44
POLR2E-206ENST00000589737 CROCC2H7BZ55 1655 aa24.05■■□□□ 1.44
POLR2E-206ENST00000589737 VWDEQ8N2E2 1590 aa24.04■■□□□ 1.44
POLR2E-206ENST00000589737 UBAP1LF5GYI3 381 aa24.04■■□□□ 1.44
POLR2E-206ENST00000589737 TSPY4P0CV99 314 aa24.04■■□□□ 1.44
POLR2E-206ENST00000589737 TSPY10P0CW01 314 aa24.04■■□□□ 1.44
POLR2E-206ENST00000589737 IQGAP1P46940 1657 aa24.04■■□□□ 1.44
POLR2E-206ENST00000589737 MYOM3Q5VTT5 1437 aa24.02■■□□□ 1.44
POLR2E-206ENST00000589737 CFAP65Q6ZU64 1925 aaKnown RBP24.02■■□□□ 1.44
POLR2E-206ENST00000589737 MED14O60244 1454 aa24.01■■□□□ 1.43
POLR2E-206ENST00000589737 SHANK2Q9UPX8 1470 aa24.01■■□□□ 1.43
POLR2E-206ENST00000589737 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.01■■□□□ 1.431e-6■■□□□ 13.7
POLR2E-206ENST00000589737 ERVK-7P63135 1459 aa24■■□□□ 1.43
POLR2E-206ENST00000589737 UBR1Q8IWV7 1749 aa23.98■■□□□ 1.43
POLR2E-206ENST00000589737 STRCP1A6NGW2 1772 aa23.97■■□□□ 1.43
POLR2E-206ENST00000589737 NPHP4O75161 1426 aaPredicted RBP23.97■■□□□ 1.43
POLR2E-206ENST00000589737 DUOX2Q9NRD8 1548 aa23.97■■□□□ 1.43
POLR2E-206ENST00000589737 PRDM15P57071 1507 aaPredicted RBP23.96■■□□□ 1.43
POLR2E-206ENST00000589737 KANK4Q5T7N3 995 aaPredicted RBP23.96■■□□□ 1.43
POLR2E-206ENST00000589737 ANKLE2Q86XL3 938 aa23.95■■□□□ 1.42
POLR2E-206ENST00000589737 THEMISQ8N1K5 641 aaPredicted RBP23.95■■□□□ 1.42
POLR2E-206ENST00000589737 ALKQ9UM73 1620 aa23.93■■□□□ 1.42
POLR2E-206ENST00000589737 LOC105371045A0A1W2PR82 267 aa23.93■■□□□ 1.42
POLR2E-206ENST00000589737 PTPN23Q9H3S7 1636 aa23.92■■□□□ 1.42
POLR2E-206ENST00000589737 SYNMO15061 1565 aa23.92■■□□□ 1.42
POLR2E-206ENST00000589737 ERBINQ96RT1 1412 aa23.88■■□□□ 1.41
POLR2E-206ENST00000589737 MED1Q15648 1581 aaPredicted RBP23.86■■□□□ 1.41
POLR2E-206ENST00000589737 KIF15Q9NS87 1388 aa23.86■■□□□ 1.41
POLR2E-206ENST00000589737 ABCC5O15440 1437 aa23.85■■□□□ 1.41
POLR2E-206ENST00000589737 ARHGAP31Q2M1Z3 1444 aa23.85■■□□□ 1.41
POLR2E-206ENST00000589737 TOM1O60784 492 aa23.85■■□□□ 1.41
POLR2E-206ENST00000589737 SLIT1O75093 1534 aa23.84■■□□□ 1.41
POLR2E-206ENST00000589737 SCAF11Q99590 1463 aaKnown RBP23.83■■□□□ 1.41
POLR2E-206ENST00000589737 ARHGAP23Q9P227 1491 aa23.83■■□□□ 1.41
POLR2E-206ENST00000589737 SCAF1Q9H7N4 1312 aaKnown RBP23.83■■□□□ 1.4
POLR2E-206ENST00000589737 PIK3C2BO00750 1634 aa23.82■■□□□ 1.4
POLR2E-206ENST00000589737 HSPA1LP34931 641 aa23.82■■□□□ 1.4
POLR2E-206ENST00000589737 PIP4K2BP78356 416 aa23.82■■□□□ 1.4
POLR2E-206ENST00000589737 LRRC7Q96NW7 1537 aa23.82■■□□□ 1.4
POLR2E-206ENST00000589737 DAPK1P53355 1430 aa23.82■■□□□ 1.4
POLR2E-206ENST00000589737 KDM5AP29375 1690 aaKnown RBP23.81■■□□□ 1.4
POLR2E-206ENST00000589737 XIRP1Q702N8 1843 aaKnown RBP23.81■■□□□ 1.4
POLR2E-206ENST00000589737 FGD6Q6ZV73 1430 aa23.79■■□□□ 1.4
POLR2E-206ENST00000589737 LMTK2Q8IWU2 1503 aa23.76■■□□□ 1.39
POLR2E-206ENST00000589737 RRP7BPQ9NSQ0 103 aa23.73■■□□□ 1.39
POLR2E-206ENST00000589737 EFCAB6Q5THR3 1501 aa23.71■■□□□ 1.39
POLR2E-206ENST00000589737 LTKP29376 864 aa23.7■■□□□ 1.38
POLR2E-206ENST00000589737 KANK1Q14678 1352 aa23.69■■□□□ 1.38
POLR2E-206ENST00000589737 ANKRD30AQ9BXX3 1397 aa23.69■■□□□ 1.38
POLR2E-206ENST00000589737 ADGRL2O95490 1459 aa23.68■■□□□ 1.38
POLR2E-206ENST00000589737 APLP2Q06481 763 aa23.68■■□□□ 1.38
POLR2E-206ENST00000589737 TMEM2Q9UHN6 1383 aa23.67■■□□□ 1.38
POLR2E-206ENST00000589737 TXNDC2Q86VQ3 553 aa23.66■■□□□ 1.38
POLR2E-206ENST00000589737 ADGRB3O60242 1522 aa23.65■■□□□ 1.38
POLR2E-206ENST00000589737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.65■■□□□ 1.381e-12■□□□□ 9.3
POLR2E-206ENST00000589737 NOS1P29475 1434 aa23.64■■□□□ 1.37
POLR2E-206ENST00000589737 MYO5BQ9ULV0 1848 aa23.63■■□□□ 1.37
POLR2E-206ENST00000589737 EID1Q9Y6B2 187 aa23.62■■□□□ 1.37
POLR2E-206ENST00000589737 TET3O43151 1660 aa23.62■■□□□ 1.37
POLR2E-206ENST00000589737 CHIC2Q9UKJ5 165 aa23.6■■□□□ 1.37
POLR2E-206ENST00000589737 NWD1Q149M9 1564 aa23.6■■□□□ 1.37
POLR2E-206ENST00000589737 GCC2Q8IWJ2 1684 aa23.58■■□□□ 1.37
POLR2E-206ENST00000589737 RPRD2Q5VT52 1461 aaKnown RBP23.57■■□□□ 1.36
POLR2E-206ENST00000589737 IDI1Q13907 227 aa23.57■■□□□ 1.36
POLR2E-206ENST00000589737 STAG3Q9UJ98 1225 aa23.57■■□□□ 1.36
POLR2E-206ENST00000589737 UNC13BO14795 1591 aa23.55■■□□□ 1.36
POLR2E-206ENST00000589737 NKTRP30414 1462 aaKnown RBP23.54■■□□□ 1.36
POLR2E-206ENST00000589737 ANKRD50Q9ULJ7 1429 aa23.53■■□□□ 1.36
POLR2E-206ENST00000589737 PHF23Q9BUL5 403 aaPredicted RBP23.53■■□□□ 1.36
POLR2E-206ENST00000589737 ROBO1Q9Y6N7 1651 aa23.52■■□□□ 1.36
POLR2E-206ENST00000589737 SENP3Q9H4L4 574 aaPredicted RBP23.52■■□□□ 1.36
POLR2E-206ENST00000589737 CHD2O14647 1828 aaKnown RBP23.51■■□□□ 1.35
POLR2E-206ENST00000589737 TMEM131LA2VDJ0 1609 aa23.51■■□□□ 1.35
POLR2E-206ENST00000589737 TMEM94Q12767 1356 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms