RNA–Protein interactions for RNA: ENST00000589737.5

POLR2E-206, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-206ENST00000589737 NISCHQ9Y2I1 1504 aa38.33■■■■□ 3.73
POLR2E-206ENST00000589737 CCDC180Q9P1Z9 1646 aa34.59■■■■□ 3.13
POLR2E-206ENST00000589737 ABCC9O60706 1549 aa34.51■■■■□ 3.12
POLR2E-206ENST00000589737 RB1CC1Q8TDY2 1594 aa32.88■■■□□ 2.85
POLR2E-206ENST00000589737 NACADO15069 1562 aa32.63■■■□□ 2.81
POLR2E-206ENST00000589737 DNAJC5BQ9UF47 199 aa32.4■■■□□ 2.78
POLR2E-206ENST00000589737 UNC13AQ9UPW8 1703 aa32.29■■■□□ 2.76
POLR2E-206ENST00000589737 MYO15BQ96JP2 1530 aa32.16■■■□□ 2.74
POLR2E-206ENST00000589737 DCAF8L2P0C7V8 631 aa32.15■■■□□ 2.74
POLR2E-206ENST00000589737 PABPN1Q86U42 306 aaKnown RBP eCLIP32.01■■■□□ 2.71
POLR2E-206ENST00000589737 BICRAQ9NZM4 1560 aa31.96■■■□□ 2.71
POLR2E-206ENST00000589737 ZCCHC6Q5VYS8 1495 aaKnown RBP31.78■■■□□ 2.68
POLR2E-206ENST00000589737 DCAF1Q9Y4B6 1507 aa31.7■■■□□ 2.67
POLR2E-206ENST00000589737 SHROOM4Q9ULL8 1493 aa31.53■■■□□ 2.64
POLR2E-206ENST00000589737 SCRIBQ14160 1630 aa31.41■■■□□ 2.62
POLR2E-206ENST00000589737 CC2D2AQ9P2K1 1620 aa31.26■■■□□ 2.59
POLR2E-206ENST00000589737 EIF4G1Q04637 1599 aaKnown RBP31.16■■■□□ 2.58
POLR2E-206ENST00000589737 CECR2Q9BXF3 1484 aa31.11■■■□□ 2.57
POLR2E-206ENST00000589737 NCAPD3P42695 1498 aa30.07■■■□□ 2.4
POLR2E-206ENST00000589737 SMARCA4P51532 1647 aa29.99■■■□□ 2.39
POLR2E-206ENST00000589737 DNAJC5Q9H3Z4 198 aa29.97■■■□□ 2.39
POLR2E-206ENST00000589737 ATAD2BQ9ULI0 1458 aa29.97■■■□□ 2.39
POLR2E-206ENST00000589737 HMGXB3Q12766 1538 aa29.92■■■□□ 2.38
POLR2E-206ENST00000589737 SMARCA2P51531 1590 aa29.92■■■□□ 2.38
POLR2E-206ENST00000589737 CUX2O14529 1486 aa29.86■■■□□ 2.37
POLR2E-206ENST00000589737 ERCC6Q03468 1493 aa29.8■■■□□ 2.36
POLR2E-206ENST00000589737 BAZ1AQ9NRL2 1556 aaPredicted RBP29.78■■■□□ 2.36
POLR2E-206ENST00000589737 PEG3Q9GZU2 1588 aa29.72■■■□□ 2.35
POLR2E-206ENST00000589737 BAZ1BQ9UIG0 1483 aaKnown RBP29.68■■■□□ 2.34
POLR2E-206ENST00000589737 NESP48681 1621 aa29.64■■■□□ 2.34
POLR2E-206ENST00000589737 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
POLR2E-206ENST00000589737 THOC2Q8NI27 1593 aaKnown RBP29.48■■■□□ 2.31
POLR2E-206ENST00000589737 LAMC3Q9Y6N6 1575 aa29.47■■■□□ 2.31
POLR2E-206ENST00000589737 KIF21AQ7Z4S6 1674 aa29.37■■■□□ 2.29
POLR2E-206ENST00000589737 WIZO95785 1651 aa29.21■■■□□ 2.27
POLR2E-206ENST00000589737 PDS5BQ9NTI5 1447 aa29.21■■■□□ 2.27
POLR2E-206ENST00000589737 CADPSQ9ULU8 1353 aa29.11■■■□□ 2.25
POLR2E-206ENST00000589737 MRC2Q9UBG0 1479 aa29.03■■■□□ 2.24
POLR2E-206ENST00000589737 WDR62O43379 1518 aa29.01■■■□□ 2.23
POLR2E-206ENST00000589737 CEP164Q9UPV0 1460 aa28.88■■■□□ 2.21
POLR2E-206ENST00000589737 TOP2AP11388 1531 aaKnown RBP28.84■■■□□ 2.21
POLR2E-206ENST00000589737 RSF1Q96T23 1441 aaPredicted RBP28.83■■■□□ 2.21
POLR2E-206ENST00000589737 FANCD2Q9BXW9 1451 aa28.82■■■□□ 2.2
POLR2E-206ENST00000589737 CFTRP13569 1480 aa28.8■■■□□ 2.2
POLR2E-206ENST00000589737 PRDM2Q13029 1718 aa28.72■■■□□ 2.19
POLR2E-206ENST00000589737 URB2Q14146 1524 aaKnown RBP28.62■■■□□ 2.17
POLR2E-206ENST00000589737 CCDC88BA6NC98 1476 aa28.43■■■□□ 2.14
POLR2E-206ENST00000589737 TRIM41Q8WV44 630 aa28.43■■■□□ 2.14
POLR2E-206ENST00000589737 OSCARQ8IYS5 282 aa28.31■■■□□ 2.12
POLR2E-206ENST00000589737 IFT140Q96RY7 1462 aa28.29■■■□□ 2.12
POLR2E-206ENST00000589737 TOPBP1Q92547 1522 aa28.28■■■□□ 2.12
POLR2E-206ENST00000589737 ZNF608Q9ULD9 1512 aaPredicted RBP28.26■■■□□ 2.11
POLR2E-206ENST00000589737 DNMBPQ6XZF7 1577 aa28.21■■■□□ 2.11
POLR2E-206ENST00000589737 EIF4G3O43432 1585 aaKnown RBP28.2■■■□□ 2.1
POLR2E-206ENST00000589737 ABCC8Q09428 1581 aa28.2■■■□□ 2.1
POLR2E-206ENST00000589737 RIMBP3CA6NJZ7 1639 aa28.15■■■□□ 2.1
POLR2E-206ENST00000589737 RIMBP3BA6NNM3 1639 aa28.15■■■□□ 2.1
POLR2E-206ENST00000589737 RIMBP3Q9UFD9 1639 aa28.15■■■□□ 2.1
POLR2E-206ENST00000589737 TARBP1Q13395 1621 aaKnown RBP28.1■■■□□ 2.09
POLR2E-206ENST00000589737 CHD1O14646 1710 aa28.04■■■□□ 2.08
POLR2E-206ENST00000589737 ARHGEF11O15085 1522 aa28.02■■■□□ 2.08
POLR2E-206ENST00000589737 POLA1P09884 1462 aaPredicted RBP27.98■■■□□ 2.07
POLR2E-206ENST00000589737 AQRO60306 1485 aaKnown RBP eCLIP27.94■■■□□ 2.062e-7■■■■□ 26
POLR2E-206ENST00000589737 RAD54L2Q9Y4B4 1467 aa27.84■■■□□ 2.05
POLR2E-206ENST00000589737 WDR97A6NE52 1622 aa27.84■■■□□ 2.05
POLR2E-206ENST00000589737 FGD5Q6ZNL6 1462 aa27.79■■■□□ 2.04
POLR2E-206ENST00000589737 SOGA1O94964 1423 aa27.77■■■□□ 2.04
POLR2E-206ENST00000589737 CUX1P39880 1505 aa27.77■■■□□ 2.04
POLR2E-206ENST00000589737 ARAP1Q96P48 1450 aa27.73■■■□□ 2.03
POLR2E-206ENST00000589737 TDRD9Q8NDG6 1382 aaKnown RBP27.72■■■□□ 2.03
POLR2E-206ENST00000589737 SNAPC4Q5SXM2 1469 aa27.71■■■□□ 2.03
POLR2E-206ENST00000589737 CLASP1Q7Z460 1538 aa27.67■■■□□ 2.02
POLR2E-206ENST00000589737 FBLN2P98095 1184 aa27.67■■■□□ 2.02
POLR2E-206ENST00000589737 MAGI1Q96QZ7 1491 aaPredicted RBP27.65■■■□□ 2.02
POLR2E-206ENST00000589737 CYB5RLQ6IPT4 315 aa27.64■■■□□ 2.02
POLR2E-206ENST00000589737 PBRM1Q86U86 1689 aa27.64■■■□□ 2.02
POLR2E-206ENST00000589737 SYNJ1O43426 1573 aa27.61■■■□□ 2.01
POLR2E-206ENST00000589737 GRIN2BQ13224 1484 aa27.6■■■□□ 2.01
POLR2E-206ENST00000589737 SYNJ2O15056 1496 aa27.54■■■□□ 2
POLR2E-206ENST00000589737 ABCA5Q8WWZ7 1642 aa27.52■■■□□ 2
POLR2E-206ENST00000589737 ABCA10Q8WWZ4 1543 aa27.48■■□□□ 1.99
POLR2E-206ENST00000589737 GAPVD1Q14C86 1478 aa27.48■■□□□ 1.99
POLR2E-206ENST00000589737 CHMP7Q8WUX9 453 aaPredicted RBP27.47■■□□□ 1.99
POLR2E-206ENST00000589737 BIVM-ERCC5R4GMW8 1640 aa27.37■■□□□ 1.97
POLR2E-206ENST00000589737 TRHP20396 242 aaPredicted RBP27.35■■□□□ 1.97
POLR2E-206ENST00000589737 ADAMTS12P58397 1594 aa27.32■■□□□ 1.96
POLR2E-206ENST00000589737 TOP2BQ02880 1626 aa27.32■■□□□ 1.96
POLR2E-206ENST00000589737 SUPT5HO00267 1087 aaKnown RBP27.31■■□□□ 1.96
POLR2E-206ENST00000589737 GRIN2AQ12879 1464 aa27.28■■□□□ 1.96
POLR2E-206ENST00000589737 WRNQ14191 1432 aaPredicted RBP eCLIP27.28■■□□□ 1.96
POLR2E-206ENST00000589737 CEP170Q5SW79 1584 aa27.22■■□□□ 1.95
POLR2E-206ENST00000589737 ERCC6L2Q5T890 1561 aa27.19■■□□□ 1.94
POLR2E-206ENST00000589737 NUP160Q12769 1436 aa27.19■■□□□ 1.94
POLR2E-206ENST00000589737 SHROOM2Q13796 1616 aa27.17■■□□□ 1.94
POLR2E-206ENST00000589737 ERICH3Q5RHP9 1530 aa27.15■■□□□ 1.94
POLR2E-206ENST00000589737 FHAD1B1AJZ9 1412 aa27.12■■□□□ 1.93
POLR2E-206ENST00000589737 RUSC2Q8N2Y8 1516 aa26.95■■□□□ 1.9
POLR2E-206ENST00000589737 KIF13AQ9H1H9 1805 aa26.9■■□□□ 1.9
POLR2E-206ENST00000589737 PRG4Q92954 1404 aaPredicted RBP26.87■■□□□ 1.89
POLR2E-206ENST00000589737 CUL7Q14999 1698 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms