RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 CEP162Q5TB80 1403 aa29.06■■■□□ 2.24
CXXC1-211ENST00000589548 KDM5DQ9BY66 1539 aa29.03■■■□□ 2.24
CXXC1-211ENST00000589548 PZPP20742 1482 aa29.02■■■□□ 2.24
CXXC1-211ENST00000589548 TNRQ92752 1358 aa29.01■■■□□ 2.24
CXXC1-211ENST00000589548 FAM135AQ9P2D6 1515 aa29.01■■■□□ 2.23
CXXC1-211ENST00000589548 FBXO31Q5XUX0 539 aaPredicted RBP29.01■■■□□ 2.23
CXXC1-211ENST00000589548 CCDC141Q6ZP82 1450 aa29.01■■■□□ 2.23
CXXC1-211ENST00000589548 CAMSAP2Q08AD1 1489 aa28.99■■■□□ 2.23
CXXC1-211ENST00000589548 CPS1P31327 1500 aa28.98■■■□□ 2.23
CXXC1-211ENST00000589548 KIF3BO15066 747 aa28.97■■■□□ 2.23
CXXC1-211ENST00000589548 NCOA2Q15596 1464 aa28.96■■■□□ 2.23
CXXC1-211ENST00000589548 SHANK2Q9UPX8 1470 aa28.95■■■□□ 2.22
CXXC1-211ENST00000589548 VWDEQ8N2E2 1590 aa28.95■■■□□ 2.22
CXXC1-211ENST00000589548 MED1Q15648 1581 aaPredicted RBP28.93■■■□□ 2.22
CXXC1-211ENST00000589548 HSPA1LP34931 641 aa28.91■■■□□ 2.22
CXXC1-211ENST00000589548 ARHGEF5Q12774 1597 aa28.91■■■□□ 2.22
CXXC1-211ENST00000589548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.9■■■□□ 2.222e-6■■■■□ 21.4
CXXC1-211ENST00000589548 DEPDC5O75140 1603 aa28.9■■■□□ 2.22
CXXC1-211ENST00000589548 ALKQ9UM73 1620 aa28.9■■■□□ 2.22
CXXC1-211ENST00000589548 UGGT1Q9NYU2 1555 aa28.88■■■□□ 2.21
CXXC1-211ENST00000589548 MIA2Q96PC5 1412 aa28.88■■■□□ 2.21
CXXC1-211ENST00000589548 NLRP1Q9C000 1473 aa28.88■■■□□ 2.21
CXXC1-211ENST00000589548 SCAF1Q9H7N4 1312 aaKnown RBP28.87■■■□□ 2.21
CXXC1-211ENST00000589548 WASHC2CQ9Y4E1 1318 aa28.87■■■□□ 2.21
CXXC1-211ENST00000589548 RNF17Q9BXT8 1623 aaKnown RBP28.87■■■□□ 2.21
CXXC1-211ENST00000589548 MED14O60244 1454 aa28.86■■■□□ 2.21
CXXC1-211ENST00000589548 STRCP1A6NGW2 1772 aa28.86■■■□□ 2.21
CXXC1-211ENST00000589548 PIP4K2BP78356 416 aa28.86■■■□□ 2.21
CXXC1-211ENST00000589548 IQGAP1P46940 1657 aa28.86■■■□□ 2.21
CXXC1-211ENST00000589548 NPHP4O75161 1426 aaPredicted RBP28.84■■■□□ 2.21
CXXC1-211ENST00000589548 ANKLE2Q86XL3 938 aa28.83■■■□□ 2.21
CXXC1-211ENST00000589548 TOM1O60784 492 aa28.82■■■□□ 2.2
CXXC1-211ENST00000589548 RSPH4AQ5TD94 716 aa28.82■■■□□ 2.2
CXXC1-211ENST00000589548 ZC3H13Q5T200 1668 aaKnown RBP28.82■■■□□ 2.2
CXXC1-211ENST00000589548 ABCC3O15438 1527 aa28.81■■■□□ 2.2
CXXC1-211ENST00000589548 THEMISQ8N1K5 641 aaPredicted RBP28.8■■■□□ 2.2
CXXC1-211ENST00000589548 MAST1Q9Y2H9 1570 aa28.79■■■□□ 2.2
CXXC1-211ENST00000589548 MROH1Q8NDA8 1641 aa28.78■■■□□ 2.2
CXXC1-211ENST00000589548 CEP152O94986 1710 aa28.77■■■□□ 2.2
CXXC1-211ENST00000589548 CFAP65Q6ZU64 1925 aaKnown RBP28.77■■■□□ 2.2
CXXC1-211ENST00000589548 EIF2AK4Q9P2K8 1649 aaKnown RBP28.76■■■□□ 2.2
CXXC1-211ENST00000589548 ERVK-7P63135 1459 aa28.73■■■□□ 2.19
CXXC1-211ENST00000589548 UBR1Q8IWV7 1749 aa28.72■■■□□ 2.19
CXXC1-211ENST00000589548 SYNMO15061 1565 aa28.72■■■□□ 2.19
CXXC1-211ENST00000589548 TSPY4P0CV99 314 aa28.72■■■□□ 2.19
CXXC1-211ENST00000589548 TSPY10P0CW01 314 aa28.72■■■□□ 2.19
CXXC1-211ENST00000589548 LRRC7Q96NW7 1537 aa28.71■■■□□ 2.19
CXXC1-211ENST00000589548 LRRC9Q6ZRR7 1453 aa28.7■■■□□ 2.18
CXXC1-211ENST00000589548 XIRP1Q702N8 1843 aaKnown RBP28.64■■■□□ 2.17
CXXC1-211ENST00000589548 VPS8Q8N3P4 1428 aa28.6■■■□□ 2.17
CXXC1-211ENST00000589548 SCAF11Q99590 1463 aaKnown RBP28.59■■■□□ 2.17
CXXC1-211ENST00000589548 PHF23Q9BUL5 403 aaPredicted RBP28.59■■■□□ 2.17
CXXC1-211ENST00000589548 DUOX2Q9NRD8 1548 aa28.59■■■□□ 2.17
CXXC1-211ENST00000589548 ARHGAP23Q9P227 1491 aa28.58■■■□□ 2.17
CXXC1-211ENST00000589548 SENP3Q9H4L4 574 aaPredicted RBP28.57■■■□□ 2.16
CXXC1-211ENST00000589548 MYOM3Q5VTT5 1437 aa28.57■■■□□ 2.16
CXXC1-211ENST00000589548 SLIT1O75093 1534 aa28.57■■■□□ 2.16
CXXC1-211ENST00000589548 PRDM15P57071 1507 aaPredicted RBP28.57■■■□□ 2.16
CXXC1-211ENST00000589548 CROCC2H7BZ55 1655 aa28.57■■■□□ 2.16
CXXC1-211ENST00000589548 KANK4Q5T7N3 995 aaPredicted RBP28.56■■■□□ 2.16
CXXC1-211ENST00000589548 LTKP29376 864 aa28.53■■■□□ 2.16
CXXC1-211ENST00000589548 PIK3C2BO00750 1634 aa28.53■■■□□ 2.16
CXXC1-211ENST00000589548 MAP3K1Q13233 1512 aa28.53■■■□□ 2.16
CXXC1-211ENST00000589548 ARHGAP31Q2M1Z3 1444 aa28.51■■■□□ 2.15
CXXC1-211ENST00000589548 KIF15Q9NS87 1388 aa28.47■■■□□ 2.15
CXXC1-211ENST00000589548 ERBINQ96RT1 1412 aa28.46■■■□□ 2.15
CXXC1-211ENST00000589548 TXNDC2Q86VQ3 553 aa28.46■■■□□ 2.15
CXXC1-211ENST00000589548 ABCC5O15440 1437 aa28.44■■■□□ 2.14
CXXC1-211ENST00000589548 PTPN23Q9H3S7 1636 aa28.43■■■□□ 2.14
CXXC1-211ENST00000589548 KDM5AP29375 1690 aaKnown RBP28.42■■■□□ 2.14
CXXC1-211ENST00000589548 RGS17Q9UGC6 210 aaPredicted RBP28.4■■■□□ 2.14
CXXC1-211ENST00000589548 TMEM2Q9UHN6 1383 aa28.39■■■□□ 2.14
CXXC1-211ENST00000589548 LOC105371045A0A1W2PR82 267 aa28.39■■■□□ 2.14
CXXC1-211ENST00000589548 RRP7BPQ9NSQ0 103 aa28.38■■■□□ 2.13
CXXC1-211ENST00000589548 EFCAB6Q5THR3 1501 aa28.37■■■□□ 2.13
CXXC1-211ENST00000589548 DAPK1P53355 1430 aa28.36■■■□□ 2.13
CXXC1-211ENST00000589548 EID1Q9Y6B2 187 aa28.36■■■□□ 2.13
CXXC1-211ENST00000589548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.35■■■□□ 2.135e-7■■■■□ 22.4
CXXC1-211ENST00000589548 LMTK2Q8IWU2 1503 aa28.34■■■□□ 2.13
CXXC1-211ENST00000589548 TET3O43151 1660 aa28.34■■■□□ 2.13
CXXC1-211ENST00000589548 ROBO1Q9Y6N7 1651 aa28.33■■■□□ 2.13
CXXC1-211ENST00000589548 FAM135BQ49AJ0 1406 aa28.33■■■□□ 2.13
CXXC1-211ENST00000589548 TMEM94Q12767 1356 aa28.32■■■□□ 2.12
CXXC1-211ENST00000589548 NWD1Q149M9 1564 aa28.28■■■□□ 2.12
CXXC1-211ENST00000589548 ADGRB3O60242 1522 aa28.28■■■□□ 2.12
CXXC1-211ENST00000589548 KANK1Q14678 1352 aa28.28■■■□□ 2.12
CXXC1-211ENST00000589548 IDI1Q13907 227 aa28.28■■■□□ 2.12
CXXC1-211ENST00000589548 STAG3Q9UJ98 1225 aa28.27■■■□□ 2.12
CXXC1-211ENST00000589548 NOS1P29475 1434 aa28.26■■■□□ 2.12
CXXC1-211ENST00000589548 FGD6Q6ZV73 1430 aa28.26■■■□□ 2.12
CXXC1-211ENST00000589548 MYO5BQ9ULV0 1848 aa28.25■■■□□ 2.11
CXXC1-211ENST00000589548 KCNA6P17658 529 aa28.25■■■□□ 2.11
CXXC1-211ENST00000589548 RBM33Q96EV2 1170 aaKnown RBP28.23■■■□□ 2.11
CXXC1-211ENST00000589548 SLC26A8Q96RN1 970 aa28.23■■■□□ 2.11
CXXC1-211ENST00000589548 NKTRP30414 1462 aaKnown RBP28.22■■■□□ 2.11
CXXC1-211ENST00000589548 CHIC2Q9UKJ5 165 aa28.21■■■□□ 2.11
CXXC1-211ENST00000589548 ANKRD30AQ9BXX3 1397 aa28.21■■■□□ 2.11
CXXC1-211ENST00000589548 POTEAQ6S8J7 498 aa28.19■■■□□ 2.1
CXXC1-211ENST00000589548 PROSER2Q86WR7 435 aaPredicted RBP28.19■■■□□ 2.1
CXXC1-211ENST00000589548 CHD2O14647 1828 aaKnown RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms