RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 PPP6R1Q9UPN7 881 aa22.39■■□□□ 1.17
CLPTM1-208ENST00000588274 KDM5DQ9BY66 1539 aa22.38■■□□□ 1.17
CLPTM1-208ENST00000588274 PZPP20742 1482 aa22.37■■□□□ 1.17
CLPTM1-208ENST00000588274 PKD2Q13563 968 aa22.37■■□□□ 1.17
CLPTM1-208ENST00000588274 POLR1AO95602 1720 aaPredicted RBP22.34■■□□□ 1.17
CLPTM1-208ENST00000588274 ARHGEF5Q12774 1597 aa22.34■■□□□ 1.17
CLPTM1-208ENST00000588274 TNRQ92752 1358 aa22.3■■□□□ 1.16
CLPTM1-208ENST00000588274 SOCS7O14512 581 aa22.3■■□□□ 1.16
CLPTM1-208ENST00000588274 FBXO31Q5XUX0 539 aaPredicted RBP22.29■■□□□ 1.16
CLPTM1-208ENST00000588274 RNF17Q9BXT8 1623 aaKnown RBP22.28■■□□□ 1.16
CLPTM1-208ENST00000588274 VWDEQ8N2E2 1590 aa22.26■■□□□ 1.15
CLPTM1-208ENST00000588274 MAST1Q9Y2H9 1570 aa22.26■■□□□ 1.15
CLPTM1-208ENST00000588274 KIF3BO15066 747 aa22.26■■□□□ 1.15
CLPTM1-208ENST00000588274 MROH1Q8NDA8 1641 aa22.25■■□□□ 1.15
CLPTM1-208ENST00000588274 ALKQ9UM73 1620 aa22.24■■□□□ 1.15
CLPTM1-208ENST00000588274 CPS1P31327 1500 aa22.24■■□□□ 1.15
CLPTM1-208ENST00000588274 LRRC9Q6ZRR7 1453 aa22.23■■□□□ 1.15
CLPTM1-208ENST00000588274 NLRP1Q9C000 1473 aa22.23■■□□□ 1.15
CLPTM1-208ENST00000588274 ABCC3O15438 1527 aa22.23■■□□□ 1.15
CLPTM1-208ENST00000588274 UBAP1LF5GYI3 381 aa22.23■■□□□ 1.15
CLPTM1-208ENST00000588274 DEPDC5O75140 1603 aa22.23■■□□□ 1.15
CLPTM1-208ENST00000588274 MIA2Q96PC5 1412 aa22.23■■□□□ 1.15
CLPTM1-208ENST00000588274 MED14O60244 1454 aa22.22■■□□□ 1.15
CLPTM1-208ENST00000588274 SHANK2Q9UPX8 1470 aa22.22■■□□□ 1.15
CLPTM1-208ENST00000588274 ZC3H13Q5T200 1668 aaKnown RBP22.21■■□□□ 1.15
CLPTM1-208ENST00000588274 UGGT1Q9NYU2 1555 aa22.21■■□□□ 1.15
CLPTM1-208ENST00000588274 RSPH4AQ5TD94 716 aa22.2■■□□□ 1.14
CLPTM1-208ENST00000588274 VPS8Q8N3P4 1428 aa22.2■■□□□ 1.14
CLPTM1-208ENST00000588274 EIF2AK4Q9P2K8 1649 aaKnown RBP22.2■■□□□ 1.14
CLPTM1-208ENST00000588274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.19■■□□□ 1.14
CLPTM1-208ENST00000588274 WASHC2CQ9Y4E1 1318 aa22.17■■□□□ 1.14
CLPTM1-208ENST00000588274 ERVK-7P63135 1459 aa22.15■■□□□ 1.14
CLPTM1-208ENST00000588274 IQGAP1P46940 1657 aa22.15■■□□□ 1.14
CLPTM1-208ENST00000588274 MAP3K1Q13233 1512 aa22.15■■□□□ 1.14
CLPTM1-208ENST00000588274 STRCP1A6NGW2 1772 aa22.15■■□□□ 1.14
CLPTM1-208ENST00000588274 NPHP4O75161 1426 aaPredicted RBP22.14■■□□□ 1.14
CLPTM1-208ENST00000588274 MED1Q15648 1581 aaPredicted RBP22.12■■□□□ 1.13
CLPTM1-208ENST00000588274 MYOM3Q5VTT5 1437 aa22.11■■□□□ 1.13
CLPTM1-208ENST00000588274 CEP152O94986 1710 aa22.11■■□□□ 1.13
CLPTM1-208ENST00000588274 PRDM15P57071 1507 aaPredicted RBP22.1■■□□□ 1.13
CLPTM1-208ENST00000588274 UBR1Q8IWV7 1749 aa22.09■■□□□ 1.13
CLPTM1-208ENST00000588274 KANK4Q5T7N3 995 aaPredicted RBP22.09■■□□□ 1.13
CLPTM1-208ENST00000588274 ANKLE2Q86XL3 938 aa22.09■■□□□ 1.13
CLPTM1-208ENST00000588274 TSPY4P0CV99 314 aa22.08■■□□□ 1.13
CLPTM1-208ENST00000588274 TSPY10P0CW01 314 aa22.08■■□□□ 1.13
CLPTM1-208ENST00000588274 HSPA1LP34931 641 aa22.08■■□□□ 1.13
CLPTM1-208ENST00000588274 THEMISQ8N1K5 641 aaPredicted RBP22.08■■□□□ 1.13
CLPTM1-208ENST00000588274 SYNMO15061 1565 aa22.08■■□□□ 1.12
CLPTM1-208ENST00000588274 CROCC2H7BZ55 1655 aa22.07■■□□□ 1.12
CLPTM1-208ENST00000588274 LRRC7Q96NW7 1537 aa22.06■■□□□ 1.12
CLPTM1-208ENST00000588274 DUOX2Q9NRD8 1548 aa22.06■■□□□ 1.12
CLPTM1-208ENST00000588274 ARHGAP23Q9P227 1491 aa22.04■■□□□ 1.12
CLPTM1-208ENST00000588274 SLIT1O75093 1534 aa22.02■■□□□ 1.12
CLPTM1-208ENST00000588274 ARHGAP31Q2M1Z3 1444 aa22.02■■□□□ 1.12
CLPTM1-208ENST00000588274 TOM1O60784 492 aa22.01■■□□□ 1.11
CLPTM1-208ENST00000588274 PIP4K2BP78356 416 aa22.01■■□□□ 1.11
CLPTM1-208ENST00000588274 ABCC5O15440 1437 aa22■■□□□ 1.11
CLPTM1-208ENST00000588274 ERBINQ96RT1 1412 aa21.99■■□□□ 1.11
CLPTM1-208ENST00000588274 SCAF11Q99590 1463 aaKnown RBP21.99■■□□□ 1.11
CLPTM1-208ENST00000588274 LOC105371045A0A1W2PR82 267 aa21.98■■□□□ 1.11
CLPTM1-208ENST00000588274 KIF15Q9NS87 1388 aa21.98■■□□□ 1.11
CLPTM1-208ENST00000588274 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
CLPTM1-208ENST00000588274 PTPN23Q9H3S7 1636 aa21.96■■□□□ 1.11
CLPTM1-208ENST00000588274 XIRP1Q702N8 1843 aaKnown RBP21.96■■□□□ 1.11
CLPTM1-208ENST00000588274 PIK3C2BO00750 1634 aa21.95■■□□□ 1.1
CLPTM1-208ENST00000588274 LTKP29376 864 aa21.93■■□□□ 1.1
CLPTM1-208ENST00000588274 DAPK1P53355 1430 aa21.93■■□□□ 1.1
CLPTM1-208ENST00000588274 LMTK2Q8IWU2 1503 aa21.93■■□□□ 1.1
CLPTM1-208ENST00000588274 CFAP65Q6ZU64 1925 aaKnown RBP21.92■■□□□ 1.1
CLPTM1-208ENST00000588274 KDM5AP29375 1690 aaKnown RBP21.91■■□□□ 1.1
CLPTM1-208ENST00000588274 FGD6Q6ZV73 1430 aa21.89■■□□□ 1.09
CLPTM1-208ENST00000588274 TMEM2Q9UHN6 1383 aa21.87■■□□□ 1.09
CLPTM1-208ENST00000588274 EFCAB6Q5THR3 1501 aa21.85■■□□□ 1.09
CLPTM1-208ENST00000588274 RRP7BPQ9NSQ0 103 aa21.85■■□□□ 1.09
CLPTM1-208ENST00000588274 TET3O43151 1660 aa21.85■■□□□ 1.09
CLPTM1-208ENST00000588274 NOS1P29475 1434 aa21.83■■□□□ 1.09
CLPTM1-208ENST00000588274 TXNDC2Q86VQ3 553 aa21.82■■□□□ 1.08
CLPTM1-208ENST00000588274 ADGRL2O95490 1459 aa21.82■■□□□ 1.08
CLPTM1-208ENST00000588274 ADGRB3O60242 1522 aa21.8■■□□□ 1.08
CLPTM1-208ENST00000588274 NWD1Q149M9 1564 aa21.8■■□□□ 1.08
CLPTM1-208ENST00000588274 ANKRD30AQ9BXX3 1397 aa21.76■■□□□ 1.07
CLPTM1-208ENST00000588274 IDI1Q13907 227 aa21.76■■□□□ 1.07
CLPTM1-208ENST00000588274 KANK1Q14678 1352 aa21.75■■□□□ 1.07
CLPTM1-208ENST00000588274 FAM135BQ49AJ0 1406 aa21.75■■□□□ 1.07
CLPTM1-208ENST00000588274 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.75■■□□□ 1.079e-10■□□□□ 11.1
CLPTM1-208ENST00000588274 RGS17Q9UGC6 210 aaPredicted RBP21.75■■□□□ 1.07
CLPTM1-208ENST00000588274 TMEM94Q12767 1356 aa21.74■■□□□ 1.07
CLPTM1-208ENST00000588274 SENP3Q9H4L4 574 aaPredicted RBP21.73■■□□□ 1.07
CLPTM1-208ENST00000588274 EID1Q9Y6B2 187 aa21.73■■□□□ 1.07
CLPTM1-208ENST00000588274 NKTRP30414 1462 aaKnown RBP21.72■■□□□ 1.07
CLPTM1-208ENST00000588274 ZFYVE9O95405 1425 aa21.72■■□□□ 1.07
CLPTM1-208ENST00000588274 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
CLPTM1-208ENST00000588274 CHIC2Q9UKJ5 165 aa21.71■■□□□ 1.07
CLPTM1-208ENST00000588274 ROBO1Q9Y6N7 1651 aa21.71■■□□□ 1.07
CLPTM1-208ENST00000588274 RPRD2Q5VT52 1461 aaKnown RBP21.71■■□□□ 1.07
CLPTM1-208ENST00000588274 KCNA6P17658 529 aa21.68■■□□□ 1.06
CLPTM1-208ENST00000588274 MYO5BQ9ULV0 1848 aa21.67■■□□□ 1.06
CLPTM1-208ENST00000588274 GCC2Q8IWJ2 1684 aa21.66■■□□□ 1.06
CLPTM1-208ENST00000588274 TMEM131LA2VDJ0 1609 aa21.66■■□□□ 1.06
CLPTM1-208ENST00000588274 UNC13BO14795 1591 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms