RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 A2ML1A8K2U0 1454 aa20.13■□□□□ 0.81
CDK5RAP3-212ENST00000579175 CEP162Q5TB80 1403 aa20.13■□□□□ 0.81
CDK5RAP3-212ENST00000579175 TNRQ92752 1358 aa20.11■□□□□ 0.81
CDK5RAP3-212ENST00000579175 TSPY4P0CV99 314 aa20.11■□□□□ 0.81
CDK5RAP3-212ENST00000579175 TSPY10P0CW01 314 aa20.11■□□□□ 0.81
CDK5RAP3-212ENST00000579175 RSPH4AQ5TD94 716 aa20.11■□□□□ 0.81
CDK5RAP3-212ENST00000579175 PIP4K2BP78356 416 aa20.1■□□□□ 0.81
CDK5RAP3-212ENST00000579175 DNMT1P26358 1616 aaKnown RBP20.09■□□□□ 0.81
CDK5RAP3-212ENST00000579175 CCDC141Q6ZP82 1450 aa20.09■□□□□ 0.81
CDK5RAP3-212ENST00000579175 ANKLE2Q86XL3 938 aa20.08■□□□□ 0.81
CDK5RAP3-212ENST00000579175 CAMSAP2Q08AD1 1489 aa20.07■□□□□ 0.8
CDK5RAP3-212ENST00000579175 NCOA2Q15596 1464 aa20.06■□□□□ 0.8
CDK5RAP3-212ENST00000579175 TOM1O60784 492 aa20.06■□□□□ 0.8
CDK5RAP3-212ENST00000579175 THEMISQ8N1K5 641 aaPredicted RBP20.06■□□□□ 0.8
CDK5RAP3-212ENST00000579175 KDM5DQ9BY66 1539 aa20.05■□□□□ 0.8
CDK5RAP3-212ENST00000579175 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.05■□□□□ 0.8
CDK5RAP3-212ENST00000579175 PZPP20742 1482 aa20.03■□□□□ 0.8
CDK5RAP3-212ENST00000579175 POLR1AO95602 1720 aaPredicted RBP20.02■□□□□ 0.79
CDK5RAP3-212ENST00000579175 MIA2Q96PC5 1412 aa20.02■□□□□ 0.79
CDK5RAP3-212ENST00000579175 HSPA1LP34931 641 aa20.01■□□□□ 0.79
CDK5RAP3-212ENST00000579175 SHANK2Q9UPX8 1470 aa20■□□□□ 0.79
CDK5RAP3-212ENST00000579175 CPS1P31327 1500 aa19.99■□□□□ 0.79
CDK5RAP3-212ENST00000579175 FAM135AQ9P2D6 1515 aa19.98■□□□□ 0.79
CDK5RAP3-212ENST00000579175 UGGT1Q9NYU2 1555 aa19.98■□□□□ 0.79
CDK5RAP3-212ENST00000579175 NEURL4Q96JN8 1562 aa19.97■□□□□ 0.79
CDK5RAP3-212ENST00000579175 NLRP1Q9C000 1473 aa19.97■□□□□ 0.79
CDK5RAP3-212ENST00000579175 NPHP4O75161 1426 aaPredicted RBP19.95■□□□□ 0.78
CDK5RAP3-212ENST00000579175 SENP3Q9H4L4 574 aaPredicted RBP19.95■□□□□ 0.78
CDK5RAP3-212ENST00000579175 ARHGEF5Q12774 1597 aa19.95■□□□□ 0.78
CDK5RAP3-212ENST00000579175 LOC105371045A0A1W2PR82 267 aa19.9■□□□□ 0.78
CDK5RAP3-212ENST00000579175 PHF23Q9BUL5 403 aaPredicted RBP19.9■□□□□ 0.78
CDK5RAP3-212ENST00000579175 LRRC9Q6ZRR7 1453 aa19.9■□□□□ 0.78
CDK5RAP3-212ENST00000579175 CFAP65Q6ZU64 1925 aaKnown RBP19.88■□□□□ 0.77
CDK5RAP3-212ENST00000579175 VWDEQ8N2E2 1590 aa19.88■□□□□ 0.77
CDK5RAP3-212ENST00000579175 MED14O60244 1454 aa19.88■□□□□ 0.77
CDK5RAP3-212ENST00000579175 KANK4Q5T7N3 995 aaPredicted RBP19.88■□□□□ 0.77
CDK5RAP3-212ENST00000579175 DEPDC5O75140 1603 aa19.87■□□□□ 0.77
CDK5RAP3-212ENST00000579175 ABCC3O15438 1527 aa19.87■□□□□ 0.77
CDK5RAP3-212ENST00000579175 VPS8Q8N3P4 1428 aa19.87■□□□□ 0.77
CDK5RAP3-212ENST00000579175 IQGAP1P46940 1657 aa19.87■□□□□ 0.77
CDK5RAP3-212ENST00000579175 MED1Q15648 1581 aaPredicted RBP19.87■□□□□ 0.77
CDK5RAP3-212ENST00000579175 RNF17Q9BXT8 1623 aaKnown RBP19.85■□□□□ 0.77
CDK5RAP3-212ENST00000579175 ERVK-7P63135 1459 aa19.85■□□□□ 0.77
CDK5RAP3-212ENST00000579175 ZC3H13Q5T200 1668 aaKnown RBP19.84■□□□□ 0.77
CDK5RAP3-212ENST00000579175 MAST1Q9Y2H9 1570 aa19.84■□□□□ 0.77
CDK5RAP3-212ENST00000579175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.84■□□□□ 0.774e-9■■□□□ 14.3
CDK5RAP3-212ENST00000579175 TXNDC2Q86VQ3 553 aa19.83■□□□□ 0.77
CDK5RAP3-212ENST00000579175 RRP7BPQ9NSQ0 103 aa19.83■□□□□ 0.77
CDK5RAP3-212ENST00000579175 APLP2Q06481 763 aa19.82■□□□□ 0.76
CDK5RAP3-212ENST00000579175 STAG3Q9UJ98 1225 aa19.82■□□□□ 0.76
CDK5RAP3-212ENST00000579175 EIF2AK4Q9P2K8 1649 aaKnown RBP19.82■□□□□ 0.76
CDK5RAP3-212ENST00000579175 MYOM3Q5VTT5 1437 aa19.82■□□□□ 0.76
CDK5RAP3-212ENST00000579175 EID1Q9Y6B2 187 aa19.81■□□□□ 0.76
CDK5RAP3-212ENST00000579175 CEP152O94986 1710 aa19.81■□□□□ 0.76
CDK5RAP3-212ENST00000579175 LRRC7Q96NW7 1537 aa19.8■□□□□ 0.76
CDK5RAP3-212ENST00000579175 DUOX2Q9NRD8 1548 aa19.8■□□□□ 0.76
CDK5RAP3-212ENST00000579175 LTKP29376 864 aa19.78■□□□□ 0.76
CDK5RAP3-212ENST00000579175 STRCP1A6NGW2 1772 aa19.78■□□□□ 0.76
CDK5RAP3-212ENST00000579175 KIF15Q9NS87 1388 aa19.77■□□□□ 0.76
CDK5RAP3-212ENST00000579175 SCAF11Q99590 1463 aaKnown RBP19.77■□□□□ 0.76
CDK5RAP3-212ENST00000579175 MROH1Q8NDA8 1641 aa19.76■□□□□ 0.75
CDK5RAP3-212ENST00000579175 UBR1Q8IWV7 1749 aa19.76■□□□□ 0.75
CDK5RAP3-212ENST00000579175 KANK1Q14678 1352 aa19.75■□□□□ 0.75
CDK5RAP3-212ENST00000579175 ALKQ9UM73 1620 aa19.75■□□□□ 0.75
CDK5RAP3-212ENST00000579175 MAP3K1Q13233 1512 aa19.75■□□□□ 0.75
CDK5RAP3-212ENST00000579175 CHIC2Q9UKJ5 165 aa19.74■□□□□ 0.75
CDK5RAP3-212ENST00000579175 SYNMO15061 1565 aa19.74■□□□□ 0.75
CDK5RAP3-212ENST00000579175 ERBINQ96RT1 1412 aa19.71■□□□□ 0.75
CDK5RAP3-212ENST00000579175 ABCC5O15440 1437 aa19.7■□□□□ 0.74
CDK5RAP3-212ENST00000579175 ARHGAP31Q2M1Z3 1444 aa19.7■□□□□ 0.74
CDK5RAP3-212ENST00000579175 BCANQ96GW7 911 aa19.7■□□□□ 0.74
CDK5RAP3-212ENST00000579175 SLIT1O75093 1534 aa19.69■□□□□ 0.74
CDK5RAP3-212ENST00000579175 ARHGAP23Q9P227 1491 aa19.68■□□□□ 0.74
CDK5RAP3-212ENST00000579175 PRDM15P57071 1507 aaPredicted RBP19.68■□□□□ 0.74
CDK5RAP3-212ENST00000579175 PTPN23Q9H3S7 1636 aa19.68■□□□□ 0.74
CDK5RAP3-212ENST00000579175 IDI1Q13907 227 aa19.67■□□□□ 0.74
CDK5RAP3-212ENST00000579175 TMEM2Q9UHN6 1383 aa19.67■□□□□ 0.74
CDK5RAP3-212ENST00000579175 DAPK1P53355 1430 aa19.67■□□□□ 0.74
CDK5RAP3-212ENST00000579175 PIK3C2BO00750 1634 aa19.66■□□□□ 0.74
CDK5RAP3-212ENST00000579175 PROSER2Q86WR7 435 aaPredicted RBP19.66■□□□□ 0.74
CDK5RAP3-212ENST00000579175 SLC26A8Q96RN1 970 aa19.66■□□□□ 0.74
CDK5RAP3-212ENST00000579175 ANKRD30AQ9BXX3 1397 aa19.66■□□□□ 0.74
CDK5RAP3-212ENST00000579175 CROCC2H7BZ55 1655 aa19.65■□□□□ 0.74
CDK5RAP3-212ENST00000579175 KCNA6P17658 529 aa19.63■□□□□ 0.73
CDK5RAP3-212ENST00000579175 RBM33Q96EV2 1170 aaKnown RBP19.63■□□□□ 0.73
CDK5RAP3-212ENST00000579175 TMEM94Q12767 1356 aa19.62■□□□□ 0.73
CDK5RAP3-212ENST00000579175 EFCAB6Q5THR3 1501 aa19.61■□□□□ 0.73
CDK5RAP3-212ENST00000579175 FGD6Q6ZV73 1430 aa19.61■□□□□ 0.73
CDK5RAP3-212ENST00000579175 XIRP1Q702N8 1843 aaKnown RBP19.6■□□□□ 0.73
CDK5RAP3-212ENST00000579175 FAM50AQ14320 339 aaKnown RBP19.59■□□□□ 0.73
CDK5RAP3-212ENST00000579175 FAM135BQ49AJ0 1406 aa19.58■□□□□ 0.72
CDK5RAP3-212ENST00000579175 SLC52A1Q9NWF4 448 aa19.57■□□□□ 0.72
CDK5RAP3-212ENST00000579175 RGS17Q9UGC6 210 aaPredicted RBP19.57■□□□□ 0.72
CDK5RAP3-212ENST00000579175 PPP1R15AO75807 674 aaPredicted RBP19.56■□□□□ 0.72
CDK5RAP3-212ENST00000579175 LMTK2Q8IWU2 1503 aa19.55■□□□□ 0.72
CDK5RAP3-212ENST00000579175 HDGFP51858 240 aaKnown RBP19.54■□□□□ 0.72
CDK5RAP3-212ENST00000579175 KDM5AP29375 1690 aaKnown RBP19.53■□□□□ 0.72
CDK5RAP3-212ENST00000579175 CHGAP10645 457 aaKnown RBP19.53■□□□□ 0.72
CDK5RAP3-212ENST00000579175 MSH6P52701 1360 aa19.53■□□□□ 0.72
CDK5RAP3-212ENST00000579175 NOS1P29475 1434 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms