RNA–Protein interactions for RNA: ENST00000579175.5

CDK5RAP3-212, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-212ENST00000579175 NISCHQ9Y2I1 1504 aa31.59■■■□□ 2.65
CDK5RAP3-212ENST00000579175 ABCC9O60706 1549 aa28.74■■■□□ 2.19
CDK5RAP3-212ENST00000579175 CCDC180Q9P1Z9 1646 aa28.4■■■□□ 2.14
CDK5RAP3-212ENST00000579175 RB1CC1Q8TDY2 1594 aa27.21■■□□□ 1.95
CDK5RAP3-212ENST00000579175 DNAJC5BQ9UF47 199 aa27.13■■□□□ 1.93
CDK5RAP3-212ENST00000579175 DCAF8L2P0C7V8 631 aa27.05■■□□□ 1.92
CDK5RAP3-212ENST00000579175 NACADO15069 1562 aa26.93■■□□□ 1.9
CDK5RAP3-212ENST00000579175 PABPN1Q86U42 306 aaKnown RBP eCLIP26.79■■□□□ 1.885e-11■□□□□ 8.8
CDK5RAP3-212ENST00000579175 UNC13AQ9UPW8 1703 aa26.53■■□□□ 1.84
CDK5RAP3-212ENST00000579175 MYO15BQ96JP2 1530 aa26.42■■□□□ 1.82
CDK5RAP3-212ENST00000579175 BICRAQ9NZM4 1560 aa26.35■■□□□ 1.81
CDK5RAP3-212ENST00000579175 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
CDK5RAP3-212ENST00000579175 DCAF1Q9Y4B6 1507 aa26.01■■□□□ 1.75
CDK5RAP3-212ENST00000579175 SCRIBQ14160 1630 aa25.96■■□□□ 1.75
CDK5RAP3-212ENST00000579175 SHROOM4Q9ULL8 1493 aa25.95■■□□□ 1.74
CDK5RAP3-212ENST00000579175 CC2D2AQ9P2K1 1620 aa25.89■■□□□ 1.74
CDK5RAP3-212ENST00000579175 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.73
CDK5RAP3-212ENST00000579175 EIF4G1Q04637 1599 aaKnown RBP25.77■■□□□ 1.72
CDK5RAP3-212ENST00000579175 DNAJC5Q9H3Z4 198 aa25.09■■□□□ 1.61
CDK5RAP3-212ENST00000579175 NCAPD3P42695 1498 aa24.87■■□□□ 1.57
CDK5RAP3-212ENST00000579175 ERCC6Q03468 1493 aa24.87■■□□□ 1.57
CDK5RAP3-212ENST00000579175 CUX2O14529 1486 aa24.79■■□□□ 1.56
CDK5RAP3-212ENST00000579175 ATAD2BQ9ULI0 1458 aa24.78■■□□□ 1.56
CDK5RAP3-212ENST00000579175 SMARCA2P51531 1590 aa24.71■■□□□ 1.55
CDK5RAP3-212ENST00000579175 SMARCA4P51532 1647 aa24.68■■□□□ 1.54
CDK5RAP3-212ENST00000579175 HMGXB3Q12766 1538 aa24.64■■□□□ 1.53
CDK5RAP3-212ENST00000579175 NESP48681 1621 aa24.61■■□□□ 1.53
CDK5RAP3-212ENST00000579175 BAZ1BQ9UIG0 1483 aaKnown RBP24.58■■□□□ 1.52
CDK5RAP3-212ENST00000579175 BAZ1AQ9NRL2 1556 aaPredicted RBP24.55■■□□□ 1.52
CDK5RAP3-212ENST00000579175 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
CDK5RAP3-212ENST00000579175 MROH2BQ7Z745 1585 aa24.36■■□□□ 1.49
CDK5RAP3-212ENST00000579175 LAMC3Q9Y6N6 1575 aa24.35■■□□□ 1.49
CDK5RAP3-212ENST00000579175 THOC2Q8NI27 1593 aaKnown RBP24.31■■□□□ 1.48
CDK5RAP3-212ENST00000579175 PDS5BQ9NTI5 1447 aa24.28■■□□□ 1.48
CDK5RAP3-212ENST00000579175 KIF21AQ7Z4S6 1674 aa24.24■■□□□ 1.47
CDK5RAP3-212ENST00000579175 CADPSQ9ULU8 1353 aa24.16■■□□□ 1.46
CDK5RAP3-212ENST00000579175 WIZO95785 1651 aa24.08■■□□□ 1.44
CDK5RAP3-212ENST00000579175 MRC2Q9UBG0 1479 aa24.05■■□□□ 1.44
CDK5RAP3-212ENST00000579175 TRIM41Q8WV44 630 aa24.03■■□□□ 1.44
CDK5RAP3-212ENST00000579175 WDR62O43379 1518 aa23.94■■□□□ 1.42
CDK5RAP3-212ENST00000579175 CEP164Q9UPV0 1460 aa23.93■■□□□ 1.42
CDK5RAP3-212ENST00000579175 FANCD2Q9BXW9 1451 aa23.88■■□□□ 1.41
CDK5RAP3-212ENST00000579175 CFTRP13569 1480 aa23.79■■□□□ 1.4
CDK5RAP3-212ENST00000579175 RSF1Q96T23 1441 aaPredicted RBP23.78■■□□□ 1.4
CDK5RAP3-212ENST00000579175 OSCARQ8IYS5 282 aa23.75■■□□□ 1.39
CDK5RAP3-212ENST00000579175 TOP2AP11388 1531 aaKnown RBP23.72■■□□□ 1.39
CDK5RAP3-212ENST00000579175 URB2Q14146 1524 aaKnown RBP23.66■■□□□ 1.38
CDK5RAP3-212ENST00000579175 CCDC88BA6NC98 1476 aa23.5■■□□□ 1.35
CDK5RAP3-212ENST00000579175 PRDM2Q13029 1718 aa23.5■■□□□ 1.35
CDK5RAP3-212ENST00000579175 IFT140Q96RY7 1462 aa23.44■■□□□ 1.34
CDK5RAP3-212ENST00000579175 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
CDK5RAP3-212ENST00000579175 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
CDK5RAP3-212ENST00000579175 RIMBP3CA6NJZ7 1639 aa23.36■■□□□ 1.33
CDK5RAP3-212ENST00000579175 RIMBP3BA6NNM3 1639 aa23.36■■□□□ 1.33
CDK5RAP3-212ENST00000579175 RIMBP3Q9UFD9 1639 aa23.36■■□□□ 1.33
CDK5RAP3-212ENST00000579175 ABCC8Q09428 1581 aa23.33■■□□□ 1.33
CDK5RAP3-212ENST00000579175 FBLN2P98095 1184 aa23.27■■□□□ 1.32
CDK5RAP3-212ENST00000579175 EIF4G3O43432 1585 aaKnown RBP23.27■■□□□ 1.32
CDK5RAP3-212ENST00000579175 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
CDK5RAP3-212ENST00000579175 ARHGEF11O15085 1522 aa23.26■■□□□ 1.31
CDK5RAP3-212ENST00000579175 CYB5RLQ6IPT4 315 aa23.24■■□□□ 1.31
CDK5RAP3-212ENST00000579175 AQRO60306 1485 aaKnown RBP eCLIP23.24■■□□□ 1.312e-7■■■■□ 24.7
CDK5RAP3-212ENST00000579175 CHD1O14646 1710 aa23.15■■□□□ 1.3
CDK5RAP3-212ENST00000579175 TARBP1Q13395 1621 aaKnown RBP23.15■■□□□ 1.3
CDK5RAP3-212ENST00000579175 POLA1P09884 1462 aaPredicted RBP23.12■■□□□ 1.29
CDK5RAP3-212ENST00000579175 TRHP20396 242 aaPredicted RBP23.12■■□□□ 1.29
CDK5RAP3-212ENST00000579175 SOGA1O94964 1423 aa23.09■■□□□ 1.29
CDK5RAP3-212ENST00000579175 TDRD9Q8NDG6 1382 aaKnown RBP23.09■■□□□ 1.29
CDK5RAP3-212ENST00000579175 RAD54L2Q9Y4B4 1467 aa23.09■■□□□ 1.29
CDK5RAP3-212ENST00000579175 ARAP1Q96P48 1450 aa23.01■■□□□ 1.27
CDK5RAP3-212ENST00000579175 CHMP7Q8WUX9 453 aaPredicted RBP23.01■■□□□ 1.27
CDK5RAP3-212ENST00000579175 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
CDK5RAP3-212ENST00000579175 SNAPC4Q5SXM2 1469 aa22.97■■□□□ 1.27
CDK5RAP3-212ENST00000579175 CUX1P39880 1505 aa22.89■■□□□ 1.26
CDK5RAP3-212ENST00000579175 GRIN2BQ13224 1484 aa22.87■■□□□ 1.25
CDK5RAP3-212ENST00000579175 WDR97A6NE52 1622 aa22.87■■□□□ 1.25
CDK5RAP3-212ENST00000579175 SYNJ1O43426 1573 aa22.87■■□□□ 1.25
CDK5RAP3-212ENST00000579175 MAGI1Q96QZ7 1491 aaPredicted RBP22.86■■□□□ 1.25
CDK5RAP3-212ENST00000579175 CLASP1Q7Z460 1538 aa22.82■■□□□ 1.24
CDK5RAP3-212ENST00000579175 SYNJ2O15056 1496 aa22.8■■□□□ 1.24
CDK5RAP3-212ENST00000579175 SUPT5HO00267 1087 aaKnown RBP22.78■■□□□ 1.24
CDK5RAP3-212ENST00000579175 GAPVD1Q14C86 1478 aa22.78■■□□□ 1.24
CDK5RAP3-212ENST00000579175 PBRM1Q86U86 1689 aa22.73■■□□□ 1.23
CDK5RAP3-212ENST00000579175 ABCA10Q8WWZ4 1543 aa22.67■■□□□ 1.22
CDK5RAP3-212ENST00000579175 AEBP2Q6ZN18 517 aaPredicted RBP22.63■■□□□ 1.21
CDK5RAP3-212ENST00000579175 ABCA5Q8WWZ7 1642 aa22.62■■□□□ 1.21
CDK5RAP3-212ENST00000579175 WRNQ14191 1432 aaPredicted RBP eCLIP22.6■■□□□ 1.21
CDK5RAP3-212ENST00000579175 GRIN2AQ12879 1464 aa22.56■■□□□ 1.2
CDK5RAP3-212ENST00000579175 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
CDK5RAP3-212ENST00000579175 ADAMTS12P58397 1594 aa22.48■■□□□ 1.19
CDK5RAP3-212ENST00000579175 FHAD1B1AJZ9 1412 aa22.47■■□□□ 1.19
CDK5RAP3-212ENST00000579175 CEP170Q5SW79 1584 aa22.46■■□□□ 1.19
CDK5RAP3-212ENST00000579175 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
CDK5RAP3-212ENST00000579175 NUP160Q12769 1436 aa22.45■■□□□ 1.18
CDK5RAP3-212ENST00000579175 BIVM-ERCC5R4GMW8 1640 aa22.44■■□□□ 1.18
CDK5RAP3-212ENST00000579175 ERICH3Q5RHP9 1530 aa22.38■■□□□ 1.17
CDK5RAP3-212ENST00000579175 SHROOM2Q13796 1616 aa22.35■■□□□ 1.17
CDK5RAP3-212ENST00000579175 PRG4Q92954 1404 aaPredicted RBP22.35■■□□□ 1.17
CDK5RAP3-212ENST00000579175 JPH4Q96JJ6 628 aa22.35■■□□□ 1.17
CDK5RAP3-212ENST00000579175 NPM1P06748 294 aaKnown RBP eCLIP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms