RNA–Protein interactions for RNA: ENST00000574999.1

ATP2A3-214, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 3

Gene ATP2A3, Length 776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-214ENST00000574999 CAMSAP1Q5T5Y3 1602 aa20.61■□□□□ 0.89
ATP2A3-214ENST00000574999 KDM5DQ9BY66 1539 aa20.6■□□□□ 0.89
ATP2A3-214ENST00000574999 NCKAP5LQ9HCH0 1330 aa20.59■□□□□ 0.89
ATP2A3-214ENST00000574999 FAM135AQ9P2D6 1515 aa20.59■□□□□ 0.89
ATP2A3-214ENST00000574999 MYO3AQ8NEV4 1616 aa20.59■□□□□ 0.89
ATP2A3-214ENST00000574999 ABCC5O15440 1437 aa20.59■□□□□ 0.89
ATP2A3-214ENST00000574999 PZPP20742 1482 aa20.57■□□□□ 0.88
ATP2A3-214ENST00000574999 CEP170BQ9Y4F5 1589 aaPredicted RBP20.57■□□□□ 0.88
ATP2A3-214ENST00000574999 ZNF142P52746 1687 aaPredicted RBP20.57■□□□□ 0.88
ATP2A3-214ENST00000574999 FGD6Q6ZV73 1430 aa20.56■□□□□ 0.88
ATP2A3-214ENST00000574999 PTPN23Q9H3S7 1636 aa20.56■□□□□ 0.88
ATP2A3-214ENST00000574999 PKD2Q13563 968 aa20.55■□□□□ 0.88
ATP2A3-214ENST00000574999 TNRQ92752 1358 aa20.55■□□□□ 0.88
ATP2A3-214ENST00000574999 A2ML1A8K2U0 1454 aa20.55■□□□□ 0.88
ATP2A3-214ENST00000574999 PLA2R1Q13018 1463 aa20.54■□□□□ 0.88
ATP2A3-214ENST00000574999 TCOF1Q13428 1488 aaKnown RBP20.54■□□□□ 0.88
ATP2A3-214ENST00000574999 RNF17Q9BXT8 1623 aaKnown RBP20.53■□□□□ 0.88
ATP2A3-214ENST00000574999 RRP7BPQ9NSQ0 103 aa20.53■□□□□ 0.88
ATP2A3-214ENST00000574999 DUOX2Q9NRD8 1548 aa20.53■□□□□ 0.88
ATP2A3-214ENST00000574999 SHANK2Q9UPX8 1470 aa20.52■□□□□ 0.88
ATP2A3-214ENST00000574999 DAPK1P53355 1430 aa20.52■□□□□ 0.87
ATP2A3-214ENST00000574999 KIF15Q9NS87 1388 aa20.51■□□□□ 0.87
ATP2A3-214ENST00000574999 DNMT1P26358 1616 aaKnown RBP20.51■□□□□ 0.87
ATP2A3-214ENST00000574999 EIF2AK4Q9P2K8 1649 aaKnown RBP20.51■□□□□ 0.87
ATP2A3-214ENST00000574999 ABCC3O15438 1527 aa20.51■□□□□ 0.87
ATP2A3-214ENST00000574999 LTBP4Q8N2S1 1624 aa20.5■□□□□ 0.87
ATP2A3-214ENST00000574999 MROH1Q8NDA8 1641 aa20.5■□□□□ 0.87
ATP2A3-214ENST00000574999 CROCC2H7BZ55 1655 aa20.48■□□□□ 0.87
ATP2A3-214ENST00000574999 CHIC2Q9UKJ5 165 aa20.47■□□□□ 0.87
ATP2A3-214ENST00000574999 ERBINQ96RT1 1412 aa20.45■□□□□ 0.86
ATP2A3-214ENST00000574999 NLRP1Q9C000 1473 aa20.45■□□□□ 0.86
ATP2A3-214ENST00000574999 ZNF335Q9H4Z2 1342 aaPredicted RBP20.45■□□□□ 0.86
ATP2A3-214ENST00000574999 ZC3H13Q5T200 1668 aaKnown RBP20.45■□□□□ 0.86
ATP2A3-214ENST00000574999 THEMISQ8N1K5 641 aaPredicted RBP20.44■□□□□ 0.86
ATP2A3-214ENST00000574999 ANKRD30AQ9BXX3 1397 aa20.43■□□□□ 0.86
ATP2A3-214ENST00000574999 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.43■□□□□ 0.86
ATP2A3-214ENST00000574999 SPATA31D1Q6ZQQ2 1576 aa20.42■□□□□ 0.86
ATP2A3-214ENST00000574999 FAM50AQ14320 339 aaKnown RBP20.41■□□□□ 0.86
ATP2A3-214ENST00000574999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.41■□□□□ 0.86
ATP2A3-214ENST00000574999 ERVK-7P63135 1459 aa20.41■□□□□ 0.86
ATP2A3-214ENST00000574999 PRDM15P57071 1507 aaPredicted RBP20.4■□□□□ 0.86
ATP2A3-214ENST00000574999 ANKLE2Q86XL3 938 aa20.4■□□□□ 0.86
ATP2A3-214ENST00000574999 UGGT1Q9NYU2 1555 aa20.4■□□□□ 0.86
ATP2A3-214ENST00000574999 ARHGAP31Q2M1Z3 1444 aa20.39■□□□□ 0.85
ATP2A3-214ENST00000574999 CEP152O94986 1710 aa20.39■□□□□ 0.85
ATP2A3-214ENST00000574999 IQSEC2Q5JU85 1478 aa20.38■□□□□ 0.85
ATP2A3-214ENST00000574999 NEURL4Q96JN8 1562 aa20.38■□□□□ 0.85
ATP2A3-214ENST00000574999 ADGRL2O95490 1459 aa20.37■□□□□ 0.85
ATP2A3-214ENST00000574999 DEPDC5O75140 1603 aa20.36■□□□□ 0.85
ATP2A3-214ENST00000574999 KANK1Q14678 1352 aa20.34■□□□□ 0.85
ATP2A3-214ENST00000574999 POLR1AO95602 1720 aaPredicted RBP20.33■□□□□ 0.85
ATP2A3-214ENST00000574999 MED14O60244 1454 aa20.33■□□□□ 0.85
ATP2A3-214ENST00000574999 VWDEQ8N2E2 1590 aa20.32■□□□□ 0.84
ATP2A3-214ENST00000574999 NPHP4O75161 1426 aaPredicted RBP20.31■□□□□ 0.84
ATP2A3-214ENST00000574999 LMTK2Q8IWU2 1503 aa20.31■□□□□ 0.84
ATP2A3-214ENST00000574999 CFAP65Q6ZU64 1925 aaKnown RBP20.29■□□□□ 0.84
ATP2A3-214ENST00000574999 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
ATP2A3-214ENST00000574999 ANKRD50Q9ULJ7 1429 aa20.28■□□□□ 0.84
ATP2A3-214ENST00000574999 UBR1Q8IWV7 1749 aa20.27■□□□□ 0.83
ATP2A3-214ENST00000574999 UBAP1LF5GYI3 381 aa20.26■□□□□ 0.83
ATP2A3-214ENST00000574999 LTKP29376 864 aa20.26■□□□□ 0.83
ATP2A3-214ENST00000574999 IDI1Q13907 227 aa20.26■□□□□ 0.83
ATP2A3-214ENST00000574999 ARHGAP23Q9P227 1491 aa20.24■□□□□ 0.83
ATP2A3-214ENST00000574999 TXNDC2Q86VQ3 553 aa20.24■□□□□ 0.83
ATP2A3-214ENST00000574999 CPS1P31327 1500 aa20.23■□□□□ 0.83
ATP2A3-214ENST00000574999 NOS1P29475 1434 aa20.23■□□□□ 0.83
ATP2A3-214ENST00000574999 SLIT1O75093 1534 aa20.22■□□□□ 0.83
ATP2A3-214ENST00000574999 EFCAB6Q5THR3 1501 aa20.22■□□□□ 0.83
ATP2A3-214ENST00000574999 ROCK1Q13464 1354 aa20.22■□□□□ 0.83
ATP2A3-214ENST00000574999 IQGAP1P46940 1657 aa20.22■□□□□ 0.83
ATP2A3-214ENST00000574999 SCAF11Q99590 1463 aaKnown RBP20.21■□□□□ 0.83
ATP2A3-214ENST00000574999 PIK3C2BO00750 1634 aa20.2■□□□□ 0.82
ATP2A3-214ENST00000574999 SYNMO15061 1565 aa20.2■□□□□ 0.82
ATP2A3-214ENST00000574999 TMEM2Q9UHN6 1383 aa20.2■□□□□ 0.82
ATP2A3-214ENST00000574999 ITGAEP38570 1179 aa20.19■□□□□ 0.82
ATP2A3-214ENST00000574999 STAG3Q9UJ98 1225 aa20.19■□□□□ 0.82
ATP2A3-214ENST00000574999 EID1Q9Y6B2 187 aa20.19■□□□□ 0.82
ATP2A3-214ENST00000574999 SLC52A1Q9NWF4 448 aa20.18■□□□□ 0.82
ATP2A3-214ENST00000574999 RPRD2Q5VT52 1461 aaKnown RBP20.17■□□□□ 0.82
ATP2A3-214ENST00000574999 KDM5AP29375 1690 aaKnown RBP20.14■□□□□ 0.81
ATP2A3-214ENST00000574999 TOM1O60784 492 aa20.14■□□□□ 0.81
ATP2A3-214ENST00000574999 STRCP1A6NGW2 1772 aa20.13■□□□□ 0.81
ATP2A3-214ENST00000574999 UNC13BO14795 1591 aa20.13■□□□□ 0.81
ATP2A3-214ENST00000574999 LRRC7Q96NW7 1537 aa20.12■□□□□ 0.81
ATP2A3-214ENST00000574999 TET3O43151 1660 aa20.11■□□□□ 0.81
ATP2A3-214ENST00000574999 PIP4K2BP78356 416 aa20.11■□□□□ 0.81
ATP2A3-214ENST00000574999 ADGRB3O60242 1522 aa20.1■□□□□ 0.81
ATP2A3-214ENST00000574999 NUP155O75694 1391 aa20.08■□□□□ 0.81
ATP2A3-214ENST00000574999 ALKQ9UM73 1620 aa20.08■□□□□ 0.8
ATP2A3-214ENST00000574999 RRBP1Q9P2E9 1410 aaKnown RBP20.08■□□□□ 0.8
ATP2A3-214ENST00000574999 SCAF1Q9H7N4 1312 aaKnown RBP20.07■□□□□ 0.8
ATP2A3-214ENST00000574999 DISP3Q9P2K9 1392 aa20.07■□□□□ 0.8
ATP2A3-214ENST00000574999 HSPA1LP34931 641 aa20.06■□□□□ 0.8
ATP2A3-214ENST00000574999 SLC26A8Q96RN1 970 aa20.06■□□□□ 0.8
ATP2A3-214ENST00000574999 GCC2Q8IWJ2 1684 aa20.06■□□□□ 0.8
ATP2A3-214ENST00000574999 IQGAP3Q86VI3 1631 aa20.05■□□□□ 0.8
ATP2A3-214ENST00000574999 E9PCH4 1651 aa20.04■□□□□ 0.8
ATP2A3-214ENST00000574999 ZFYVE9O95405 1425 aa20.04■□□□□ 0.8
ATP2A3-214ENST00000574999 KCNA6P17658 529 aa20.03■□□□□ 0.8
ATP2A3-214ENST00000574999 TMEM131LA2VDJ0 1609 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms