RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 NCOA2Q15596 1464 aa25.8■■□□□ 1.72
HCFC1R1-203ENST00000572355 KDM5DQ9BY66 1539 aa25.8■■□□□ 1.72
HCFC1R1-203ENST00000572355 UBAP1LF5GYI3 381 aa25.78■■□□□ 1.72
HCFC1R1-203ENST00000572355 KIF3BO15066 747 aa25.77■■□□□ 1.72
HCFC1R1-203ENST00000572355 TNRQ92752 1358 aa25.76■■□□□ 1.71
HCFC1R1-203ENST00000572355 FAM135AQ9P2D6 1515 aa25.75■■□□□ 1.71
HCFC1R1-203ENST00000572355 PZPP20742 1482 aa25.75■■□□□ 1.71
HCFC1R1-203ENST00000572355 SOCS7O14512 581 aa25.75■■□□□ 1.71
HCFC1R1-203ENST00000572355 NEURL4Q96JN8 1562 aa25.73■■□□□ 1.71
HCFC1R1-203ENST00000572355 FBXO31Q5XUX0 539 aaPredicted RBP25.73■■□□□ 1.71
HCFC1R1-203ENST00000572355 ARHGEF5Q12774 1597 aa25.71■■□□□ 1.71
HCFC1R1-203ENST00000572355 WASHC2CQ9Y4E1 1318 aa25.68■■□□□ 1.7
HCFC1R1-203ENST00000572355 RSPH4AQ5TD94 716 aa25.66■■□□□ 1.7
HCFC1R1-203ENST00000572355 CPS1P31327 1500 aa25.64■■□□□ 1.7
HCFC1R1-203ENST00000572355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.64■■□□□ 1.69
HCFC1R1-203ENST00000572355 RNF17Q9BXT8 1623 aaKnown RBP25.63■■□□□ 1.69
HCFC1R1-203ENST00000572355 NLRP1Q9C000 1473 aa25.63■■□□□ 1.69
HCFC1R1-203ENST00000572355 UGGT1Q9NYU2 1555 aa25.63■■□□□ 1.69
HCFC1R1-203ENST00000572355 SCAF1Q9H7N4 1312 aaKnown RBP25.63■■□□□ 1.69
HCFC1R1-203ENST00000572355 ZC3H13Q5T200 1668 aaKnown RBP25.61■■□□□ 1.69
HCFC1R1-203ENST00000572355 LRRC9Q6ZRR7 1453 aa25.61■■□□□ 1.69
HCFC1R1-203ENST00000572355 SHANK2Q9UPX8 1470 aa25.61■■□□□ 1.69
HCFC1R1-203ENST00000572355 TSPY4P0CV99 314 aa25.61■■□□□ 1.69
HCFC1R1-203ENST00000572355 TSPY10P0CW01 314 aa25.61■■□□□ 1.69
HCFC1R1-203ENST00000572355 MIA2Q96PC5 1412 aa25.61■■□□□ 1.69
HCFC1R1-203ENST00000572355 MAST1Q9Y2H9 1570 aa25.6■■□□□ 1.69
HCFC1R1-203ENST00000572355 ABCC3O15438 1527 aa25.58■■□□□ 1.69
HCFC1R1-203ENST00000572355 VWDEQ8N2E2 1590 aa25.58■■□□□ 1.69
HCFC1R1-203ENST00000572355 VPS8Q8N3P4 1428 aa25.58■■□□□ 1.69
HCFC1R1-203ENST00000572355 PIP4K2BP78356 416 aa25.58■■□□□ 1.69
HCFC1R1-203ENST00000572355 ANKLE2Q86XL3 938 aa25.58■■□□□ 1.69
HCFC1R1-203ENST00000572355 DEPDC5O75140 1603 aa25.58■■□□□ 1.69
HCFC1R1-203ENST00000572355 EIF2AK4Q9P2K8 1649 aaKnown RBP25.57■■□□□ 1.68
HCFC1R1-203ENST00000572355 IQGAP1P46940 1657 aa25.57■■□□□ 1.68
HCFC1R1-203ENST00000572355 NPHP4O75161 1426 aaPredicted RBP25.56■■□□□ 1.68
HCFC1R1-203ENST00000572355 THEMISQ8N1K5 641 aaPredicted RBP25.56■■□□□ 1.68
HCFC1R1-203ENST00000572355 CEP152O94986 1710 aa25.55■■□□□ 1.68
HCFC1R1-203ENST00000572355 MED14O60244 1454 aa25.53■■□□□ 1.68
HCFC1R1-203ENST00000572355 MROH1Q8NDA8 1641 aa25.53■■□□□ 1.68
HCFC1R1-203ENST00000572355 HSPA1LP34931 641 aa25.52■■□□□ 1.68
HCFC1R1-203ENST00000572355 TOM1O60784 492 aa25.51■■□□□ 1.67
HCFC1R1-203ENST00000572355 ERVK-7P63135 1459 aa25.51■■□□□ 1.67
HCFC1R1-203ENST00000572355 MED1Q15648 1581 aaPredicted RBP25.51■■□□□ 1.67
HCFC1R1-203ENST00000572355 MYOM3Q5VTT5 1437 aa25.48■■□□□ 1.67
HCFC1R1-203ENST00000572355 STRCP1A6NGW2 1772 aa25.48■■□□□ 1.67
HCFC1R1-203ENST00000572355 CFAP65Q6ZU64 1925 aaKnown RBP25.47■■□□□ 1.67
HCFC1R1-203ENST00000572355 KANK4Q5T7N3 995 aaPredicted RBP25.46■■□□□ 1.67
HCFC1R1-203ENST00000572355 UBR1Q8IWV7 1749 aa25.46■■□□□ 1.67
HCFC1R1-203ENST00000572355 MAP3K1Q13233 1512 aa25.45■■□□□ 1.66
HCFC1R1-203ENST00000572355 DUOX2Q9NRD8 1548 aa25.45■■□□□ 1.66
HCFC1R1-203ENST00000572355 ALKQ9UM73 1620 aa25.45■■□□□ 1.66
HCFC1R1-203ENST00000572355 SYNMO15061 1565 aa25.44■■□□□ 1.66
HCFC1R1-203ENST00000572355 CROCC2H7BZ55 1655 aa25.44■■□□□ 1.66
HCFC1R1-203ENST00000572355 LOC105371045A0A1W2PR82 267 aa25.43■■□□□ 1.66
HCFC1R1-203ENST00000572355 PRDM15P57071 1507 aaPredicted RBP25.4■■□□□ 1.66
HCFC1R1-203ENST00000572355 LRRC7Q96NW7 1537 aa25.39■■□□□ 1.66
HCFC1R1-203ENST00000572355 SCAF11Q99590 1463 aaKnown RBP25.37■■□□□ 1.65
HCFC1R1-203ENST00000572355 KIF15Q9NS87 1388 aa25.37■■□□□ 1.65
HCFC1R1-203ENST00000572355 SENP3Q9H4L4 574 aaPredicted RBP25.36■■□□□ 1.65
HCFC1R1-203ENST00000572355 PTPN23Q9H3S7 1636 aa25.36■■□□□ 1.65
HCFC1R1-203ENST00000572355 ERBINQ96RT1 1412 aa25.34■■□□□ 1.65
HCFC1R1-203ENST00000572355 ABCC5O15440 1437 aa25.32■■□□□ 1.64
HCFC1R1-203ENST00000572355 SLIT1O75093 1534 aa25.32■■□□□ 1.64
HCFC1R1-203ENST00000572355 PIK3C2BO00750 1634 aa25.31■■□□□ 1.64
HCFC1R1-203ENST00000572355 RRP7BPQ9NSQ0 103 aa25.31■■□□□ 1.64
HCFC1R1-203ENST00000572355 ARHGAP23Q9P227 1491 aa25.31■■□□□ 1.64
HCFC1R1-203ENST00000572355 ARHGAP31Q2M1Z3 1444 aa25.3■■□□□ 1.64
HCFC1R1-203ENST00000572355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.29■■□□□ 1.64
HCFC1R1-203ENST00000572355 PHF23Q9BUL5 403 aaPredicted RBP25.29■■□□□ 1.64
HCFC1R1-203ENST00000572355 DAPK1P53355 1430 aa25.28■■□□□ 1.64
HCFC1R1-203ENST00000572355 LTKP29376 864 aa25.27■■□□□ 1.64
HCFC1R1-203ENST00000572355 TXNDC2Q86VQ3 553 aa25.27■■□□□ 1.64
HCFC1R1-203ENST00000572355 XIRP1Q702N8 1843 aaKnown RBP25.27■■□□□ 1.64
HCFC1R1-203ENST00000572355 KANK1Q14678 1352 aa25.24■■□□□ 1.63
HCFC1R1-203ENST00000572355 FGD6Q6ZV73 1430 aa25.23■■□□□ 1.63
HCFC1R1-203ENST00000572355 EID1Q9Y6B2 187 aa25.23■■□□□ 1.63
HCFC1R1-203ENST00000572355 APLP2Q06481 763 aa25.22■■□□□ 1.63
HCFC1R1-203ENST00000572355 EFCAB6Q5THR3 1501 aa25.21■■□□□ 1.63
HCFC1R1-203ENST00000572355 KDM5AP29375 1690 aaKnown RBP25.2■■□□□ 1.63
HCFC1R1-203ENST00000572355 STAG3Q9UJ98 1225 aa25.2■■□□□ 1.62
HCFC1R1-203ENST00000572355 TMEM2Q9UHN6 1383 aa25.19■■□□□ 1.62
HCFC1R1-203ENST00000572355 LMTK2Q8IWU2 1503 aa25.18■■□□□ 1.62
HCFC1R1-203ENST00000572355 CHIC2Q9UKJ5 165 aa25.18■■□□□ 1.62
HCFC1R1-203ENST00000572355 ANKRD30AQ9BXX3 1397 aa25.18■■□□□ 1.62
HCFC1R1-203ENST00000572355 ADGRB3O60242 1522 aa25.13■■□□□ 1.61
HCFC1R1-203ENST00000572355 IDI1Q13907 227 aa25.11■■□□□ 1.61
HCFC1R1-203ENST00000572355 TMEM94Q12767 1356 aa25.09■■□□□ 1.61
HCFC1R1-203ENST00000572355 NOS1P29475 1434 aa25.09■■□□□ 1.61
HCFC1R1-203ENST00000572355 TET3O43151 1660 aa25.08■■□□□ 1.61
HCFC1R1-203ENST00000572355 SLC26A8Q96RN1 970 aa25.08■■□□□ 1.61
HCFC1R1-203ENST00000572355 ADGRL2O95490 1459 aa25.07■■□□□ 1.6
HCFC1R1-203ENST00000572355 ROBO1Q9Y6N7 1651 aa25.07■■□□□ 1.6
HCFC1R1-203ENST00000572355 NWD1Q149M9 1564 aa25.05■■□□□ 1.6
HCFC1R1-203ENST00000572355 MYO5BQ9ULV0 1848 aa25.05■■□□□ 1.6
HCFC1R1-203ENST00000572355 FAM135BQ49AJ0 1406 aa25.04■■□□□ 1.6
HCFC1R1-203ENST00000572355 KCNA6P17658 529 aa25.04■■□□□ 1.6
HCFC1R1-203ENST00000572355 RBM33Q96EV2 1170 aaKnown RBP25.04■■□□□ 1.6
HCFC1R1-203ENST00000572355 GCC2Q8IWJ2 1684 aa25.03■■□□□ 1.6
HCFC1R1-203ENST00000572355 NKTRP30414 1462 aaKnown RBP25.02■■□□□ 1.6
HCFC1R1-203ENST00000572355 PROSER2Q86WR7 435 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms