RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CAMSAP1Q5T5Y3 1602 aa19.08■□□□□ 0.65
GTF3C1-204ENST00000564664 PLA2R1Q13018 1463 aa19.08■□□□□ 0.64
GTF3C1-204ENST00000564664 MAST1Q9Y2H9 1570 aa19.07■□□□□ 0.64
GTF3C1-204ENST00000564664 KDM5DQ9BY66 1539 aa19.06■□□□□ 0.64
GTF3C1-204ENST00000564664 NCKAP5LQ9HCH0 1330 aa19.05■□□□□ 0.64
GTF3C1-204ENST00000564664 ZNF142P52746 1687 aaPredicted RBP19.05■□□□□ 0.64
GTF3C1-204ENST00000564664 A2ML1A8K2U0 1454 aa19.04■□□□□ 0.64
GTF3C1-204ENST00000564664 PZPP20742 1482 aa19.04■□□□□ 0.64
GTF3C1-204ENST00000564664 CEP170BQ9Y4F5 1589 aaPredicted RBP19.04■□□□□ 0.64
GTF3C1-204ENST00000564664 TNRQ92752 1358 aa19.04■□□□□ 0.64
GTF3C1-204ENST00000564664 MYO3AQ8NEV4 1616 aa19.03■□□□□ 0.64
GTF3C1-204ENST00000564664 FBXO31Q5XUX0 539 aaPredicted RBP19.03■□□□□ 0.64
GTF3C1-204ENST00000564664 TCOF1Q13428 1488 aaKnown RBP19.02■□□□□ 0.63
GTF3C1-204ENST00000564664 THEMISQ8N1K5 641 aaPredicted RBP19.01■□□□□ 0.63
GTF3C1-204ENST00000564664 IQSEC2Q5JU85 1478 aa19■□□□□ 0.63
GTF3C1-204ENST00000564664 LTBP4Q8N2S1 1624 aa18.98■□□□□ 0.63
GTF3C1-204ENST00000564664 EIF2AK4Q9P2K8 1649 aaKnown RBP18.98■□□□□ 0.63
GTF3C1-204ENST00000564664 DUOX2Q9NRD8 1548 aa18.98■□□□□ 0.63
GTF3C1-204ENST00000564664 NLRP1Q9C000 1473 aa18.97■□□□□ 0.63
GTF3C1-204ENST00000564664 SHANK2Q9UPX8 1470 aa18.97■□□□□ 0.63
GTF3C1-204ENST00000564664 DNMT1P26358 1616 aaKnown RBP18.97■□□□□ 0.63
GTF3C1-204ENST00000564664 RNF17Q9BXT8 1623 aaKnown RBP18.97■□□□□ 0.63
GTF3C1-204ENST00000564664 ABCC5O15440 1437 aa18.97■□□□□ 0.63
GTF3C1-204ENST00000564664 ANKLE2Q86XL3 938 aa18.96■□□□□ 0.63
GTF3C1-204ENST00000564664 FGD6Q6ZV73 1430 aa18.95■□□□□ 0.62
GTF3C1-204ENST00000564664 PTPN23Q9H3S7 1636 aa18.95■□□□□ 0.62
GTF3C1-204ENST00000564664 KIF15Q9NS87 1388 aa18.94■□□□□ 0.62
GTF3C1-204ENST00000564664 RRP7BPQ9NSQ0 103 aa18.94■□□□□ 0.62
GTF3C1-204ENST00000564664 ABCC3O15438 1527 aa18.94■□□□□ 0.62
GTF3C1-204ENST00000564664 ERBINQ96RT1 1412 aa18.93■□□□□ 0.62
GTF3C1-204ENST00000564664 ZC3H13Q5T200 1668 aaKnown RBP18.93■□□□□ 0.62
GTF3C1-204ENST00000564664 DAPK1P53355 1430 aa18.92■□□□□ 0.62
GTF3C1-204ENST00000564664 ZNF335Q9H4Z2 1342 aaPredicted RBP18.92■□□□□ 0.62
GTF3C1-204ENST00000564664 ANKRD30AQ9BXX3 1397 aa18.91■□□□□ 0.62
GTF3C1-204ENST00000564664 ARHGAP31Q2M1Z3 1444 aa18.89■□□□□ 0.61
GTF3C1-204ENST00000564664 SPATA31D1Q6ZQQ2 1576 aa18.89■□□□□ 0.61
GTF3C1-204ENST00000564664 UGGT1Q9NYU2 1555 aa18.89■□□□□ 0.61
GTF3C1-204ENST00000564664 KANK1Q14678 1352 aa18.88■□□□□ 0.61
GTF3C1-204ENST00000564664 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.88■□□□□ 0.61
GTF3C1-204ENST00000564664 MROH1Q8NDA8 1641 aa18.87■□□□□ 0.61
GTF3C1-204ENST00000564664 CROCC2H7BZ55 1655 aa18.86■□□□□ 0.61
GTF3C1-204ENST00000564664 ERVK-7P63135 1459 aa18.86■□□□□ 0.61
GTF3C1-204ENST00000564664 MED14O60244 1454 aa18.85■□□□□ 0.61
GTF3C1-204ENST00000564664 CHIC2Q9UKJ5 165 aa18.85■□□□□ 0.61
GTF3C1-204ENST00000564664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.84■□□□□ 0.614e-9■■■■□ 21
GTF3C1-204ENST00000564664 PRDM15P57071 1507 aaPredicted RBP18.84■□□□□ 0.61
GTF3C1-204ENST00000564664 POLR1AO95602 1720 aaPredicted RBP18.83■□□□□ 0.61
GTF3C1-204ENST00000564664 DEPDC5O75140 1603 aa18.83■□□□□ 0.61
GTF3C1-204ENST00000564664 UBAP1LF5GYI3 381 aa18.82■□□□□ 0.6
GTF3C1-204ENST00000564664 NPHP4O75161 1426 aaPredicted RBP18.82■□□□□ 0.6
GTF3C1-204ENST00000564664 NEURL4Q96JN8 1562 aa18.81■□□□□ 0.6
GTF3C1-204ENST00000564664 CPS1P31327 1500 aa18.81■□□□□ 0.6
GTF3C1-204ENST00000564664 FAM50AQ14320 339 aaKnown RBP18.81■□□□□ 0.6
GTF3C1-204ENST00000564664 ADGRL2O95490 1459 aa18.8■□□□□ 0.6
GTF3C1-204ENST00000564664 CEP152O94986 1710 aa18.79■□□□□ 0.6
GTF3C1-204ENST00000564664 LMTK2Q8IWU2 1503 aa18.79■□□□□ 0.6
GTF3C1-204ENST00000564664 CFAP65Q6ZU64 1925 aaKnown RBP18.78■□□□□ 0.6
GTF3C1-204ENST00000564664 TOM1O60784 492 aa18.77■□□□□ 0.6
GTF3C1-204ENST00000564664 EID1Q9Y6B2 187 aa18.77■□□□□ 0.6
GTF3C1-204ENST00000564664 TXNDC2Q86VQ3 553 aa18.76■□□□□ 0.59
GTF3C1-204ENST00000564664 STAG3Q9UJ98 1225 aa18.75■□□□□ 0.59
GTF3C1-204ENST00000564664 VWDEQ8N2E2 1590 aa18.75■□□□□ 0.59
GTF3C1-204ENST00000564664 ANKRD50Q9ULJ7 1429 aa18.74■□□□□ 0.59
GTF3C1-204ENST00000564664 SLC52A1Q9NWF4 448 aa18.74■□□□□ 0.59
GTF3C1-204ENST00000564664 UBR1Q8IWV7 1749 aa18.73■□□□□ 0.59
GTF3C1-204ENST00000564664 SLIT1O75093 1534 aa18.73■□□□□ 0.59
GTF3C1-204ENST00000564664 SCAF11Q99590 1463 aaKnown RBP18.72■□□□□ 0.59
GTF3C1-204ENST00000564664 ARHGAP23Q9P227 1491 aa18.72■□□□□ 0.59
GTF3C1-204ENST00000564664 LTKP29376 864 aa18.72■□□□□ 0.59
GTF3C1-204ENST00000564664 IDI1Q13907 227 aa18.72■□□□□ 0.59
GTF3C1-204ENST00000564664 IQGAP1P46940 1657 aa18.72■□□□□ 0.59
GTF3C1-204ENST00000564664 ROCK1Q13464 1354 aa18.7■□□□□ 0.58
GTF3C1-204ENST00000564664 TMEM2Q9UHN6 1383 aa18.7■□□□□ 0.58
GTF3C1-204ENST00000564664 NOS1P29475 1434 aa18.69■□□□□ 0.58
GTF3C1-204ENST00000564664 RPRD2Q5VT52 1461 aaKnown RBP18.69■□□□□ 0.58
GTF3C1-204ENST00000564664 KDM5AP29375 1690 aaKnown RBP18.68■□□□□ 0.58
GTF3C1-204ENST00000564664 DISP3Q9P2K9 1392 aa18.68■□□□□ 0.58
GTF3C1-204ENST00000564664 EFCAB6Q5THR3 1501 aa18.66■□□□□ 0.58
GTF3C1-204ENST00000564664 HDGFP51858 240 aaKnown RBP18.66■□□□□ 0.58
GTF3C1-204ENST00000564664 PIK3C2BO00750 1634 aa18.64■□□□□ 0.57
GTF3C1-204ENST00000564664 PIP4K2BP78356 416 aa18.63■□□□□ 0.57
GTF3C1-204ENST00000564664 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
GTF3C1-204ENST00000564664 LRRC7Q96NW7 1537 aa18.62■□□□□ 0.57
GTF3C1-204ENST00000564664 SYNMO15061 1565 aa18.6■□□□□ 0.57
GTF3C1-204ENST00000564664 KCNA6P17658 529 aa18.59■□□□□ 0.57
GTF3C1-204ENST00000564664 HSPA1LP34931 641 aa18.59■□□□□ 0.57
GTF3C1-204ENST00000564664 TET3O43151 1660 aa18.59■□□□□ 0.57
GTF3C1-204ENST00000564664 UNC13BO14795 1591 aa18.57■□□□□ 0.56
GTF3C1-204ENST00000564664 ADGRB3O60242 1522 aa18.57■□□□□ 0.56
GTF3C1-204ENST00000564664 STRCP1A6NGW2 1772 aa18.57■□□□□ 0.56
GTF3C1-204ENST00000564664 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.56■□□□□ 0.56
GTF3C1-204ENST00000564664 NUP155O75694 1391 aa18.55■□□□□ 0.56
GTF3C1-204ENST00000564664 ITGAEP38570 1179 aa18.55■□□□□ 0.56
GTF3C1-204ENST00000564664 GCC2Q8IWJ2 1684 aa18.54■□□□□ 0.56
GTF3C1-204ENST00000564664 PPARGC1BQ86YN6 1023 aaKnown RBP18.54■□□□□ 0.56
GTF3C1-204ENST00000564664 ILDR2Q71H61 639 aa18.53■□□□□ 0.56
GTF3C1-204ENST00000564664 BCANQ96GW7 911 aa18.53■□□□□ 0.56
GTF3C1-204ENST00000564664 SLC26A8Q96RN1 970 aa18.53■□□□□ 0.56
GTF3C1-204ENST00000564664 PLEKHG1Q9ULL1 1385 aa18.52■□□□□ 0.55
GTF3C1-204ENST00000564664 ZFYVE9O95405 1425 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms