RNA–Protein interactions for RNA: ENST00000563995.1

SLX1A-204, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 3

Gene SLX1A, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-204ENST00000563995 MBD5Q9P267 1494 aa30.16■■■□□ 2.42
SLX1A-204ENST00000563995 PPARGC1BQ86YN6 1023 aaKnown RBP30.13■■■□□ 2.41
SLX1A-204ENST00000563995 FGD6Q6ZV73 1430 aa30.12■■■□□ 2.41
SLX1A-204ENST00000563995 TCOF1Q13428 1488 aaKnown RBP30.12■■■□□ 2.41
SLX1A-204ENST00000563995 GGT6Q6P531 493 aa30.09■■■□□ 2.41
SLX1A-204ENST00000563995 NCKAP5LQ9HCH0 1330 aa30.09■■■□□ 2.41
SLX1A-204ENST00000563995 PTPN23Q9H3S7 1636 aa30.08■■■□□ 2.41
SLX1A-204ENST00000563995 RTEL1-TNFRSF6BF6WH68 1400 aa30.08■■■□□ 2.41
SLX1A-204ENST00000563995 HSPA1LP34931 641 aa30.06■■■□□ 2.4
SLX1A-204ENST00000563995 PPP6R1Q9UPN7 881 aa30.06■■■□□ 2.4
SLX1A-204ENST00000563995 DNMT1P26358 1616 aaKnown RBP30.05■■■□□ 2.4
SLX1A-204ENST00000563995 ARHGEF5Q12774 1597 aa30.05■■■□□ 2.4
SLX1A-204ENST00000563995 POLR1AO95602 1720 aaPredicted RBP30.03■■■□□ 2.4
SLX1A-204ENST00000563995 PKD2Q13563 968 aa30.03■■■□□ 2.4
SLX1A-204ENST00000563995 CCDC141Q6ZP82 1450 aa30.03■■■□□ 2.4
SLX1A-204ENST00000563995 A2ML1A8K2U0 1454 aa30.02■■■□□ 2.4
SLX1A-204ENST00000563995 RSPH4AQ5TD94 716 aa30.02■■■□□ 2.4
SLX1A-204ENST00000563995 SCAF1Q9H7N4 1312 aaKnown RBP30.01■■■□□ 2.4
SLX1A-204ENST00000563995 DHX29Q7Z478 1369 aaKnown RBP30.01■■■□□ 2.39
SLX1A-204ENST00000563995 PHF23Q9BUL5 403 aaPredicted RBP29.99■■■□□ 2.39
SLX1A-204ENST00000563995 FAM135AQ9P2D6 1515 aa29.99■■■□□ 2.39
SLX1A-204ENST00000563995 KDM5DQ9BY66 1539 aa29.97■■■□□ 2.39
SLX1A-204ENST00000563995 PIP4K2BP78356 416 aa29.96■■■□□ 2.39
SLX1A-204ENST00000563995 NEURL4Q96JN8 1562 aa29.94■■■□□ 2.38
SLX1A-204ENST00000563995 PZPP20742 1482 aa29.93■■■□□ 2.38
SLX1A-204ENST00000563995 TOM1O60784 492 aa29.89■■■□□ 2.38
SLX1A-204ENST00000563995 TSPY4P0CV99 314 aa29.89■■■□□ 2.38
SLX1A-204ENST00000563995 TSPY10P0CW01 314 aa29.89■■■□□ 2.38
SLX1A-204ENST00000563995 FAM50AQ14320 339 aaKnown RBP29.89■■■□□ 2.38
SLX1A-204ENST00000563995 ABCC5O15440 1437 aa29.88■■■□□ 2.37
SLX1A-204ENST00000563995 MAST1Q9Y2H9 1570 aa29.88■■■□□ 2.37
SLX1A-204ENST00000563995 TNRQ92752 1358 aa29.88■■■□□ 2.37
SLX1A-204ENST00000563995 DAPK1P53355 1430 aa29.88■■■□□ 2.37
SLX1A-204ENST00000563995 KIF3BO15066 747 aa29.87■■■□□ 2.37
SLX1A-204ENST00000563995 CROCC2H7BZ55 1655 aa29.87■■■□□ 2.37
SLX1A-204ENST00000563995 SHANK2Q9UPX8 1470 aa29.86■■■□□ 2.37
SLX1A-204ENST00000563995 RRBP1Q9P2E9 1410 aaKnown RBP29.85■■■□□ 2.37
SLX1A-204ENST00000563995 FBXO31Q5XUX0 539 aaPredicted RBP29.84■■■□□ 2.37
SLX1A-204ENST00000563995 RNF17Q9BXT8 1623 aaKnown RBP29.83■■■□□ 2.37
SLX1A-204ENST00000563995 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.83■■■□□ 2.371e-15■■■□□ 16.1
SLX1A-204ENST00000563995 CPS1P31327 1500 aa29.81■■■□□ 2.36
SLX1A-204ENST00000563995 ZC3H13Q5T200 1668 aaKnown RBP29.8■■■□□ 2.36
SLX1A-204ENST00000563995 DEPDC5O75140 1603 aa29.79■■■□□ 2.36
SLX1A-204ENST00000563995 NLRP1Q9C000 1473 aa29.79■■■□□ 2.36
SLX1A-204ENST00000563995 WASHC2CQ9Y4E1 1318 aa29.77■■■□□ 2.36
SLX1A-204ENST00000563995 VWDEQ8N2E2 1590 aa29.77■■■□□ 2.36
SLX1A-204ENST00000563995 UGGT1Q9NYU2 1555 aa29.77■■■□□ 2.36
SLX1A-204ENST00000563995 EIF2AK4Q9P2K8 1649 aaKnown RBP29.76■■■□□ 2.35
SLX1A-204ENST00000563995 ABCC3O15438 1527 aa29.73■■■□□ 2.35
SLX1A-204ENST00000563995 MED14O60244 1454 aa29.73■■■□□ 2.35
SLX1A-204ENST00000563995 MROH1Q8NDA8 1641 aa29.72■■■□□ 2.35
SLX1A-204ENST00000563995 IQGAP1P46940 1657 aa29.72■■■□□ 2.35
SLX1A-204ENST00000563995 CEP152O94986 1710 aa29.7■■■□□ 2.34
SLX1A-204ENST00000563995 ADGRL2O95490 1459 aa29.69■■■□□ 2.34
SLX1A-204ENST00000563995 CHIC2Q9UKJ5 165 aa29.68■■■□□ 2.34
SLX1A-204ENST00000563995 STRCP1A6NGW2 1772 aa29.67■■■□□ 2.34
SLX1A-204ENST00000563995 CFAP65Q6ZU64 1925 aaKnown RBP29.67■■■□□ 2.34
SLX1A-204ENST00000563995 ANKRD30AQ9BXX3 1397 aa29.67■■■□□ 2.34
SLX1A-204ENST00000563995 ANKLE2Q86XL3 938 aa29.67■■■□□ 2.34
SLX1A-204ENST00000563995 NPHP4O75161 1426 aaPredicted RBP29.67■■■□□ 2.34
SLX1A-204ENST00000563995 ALKQ9UM73 1620 aa29.67■■■□□ 2.34
SLX1A-204ENST00000563995 THEMISQ8N1K5 641 aaPredicted RBP29.66■■■□□ 2.34
SLX1A-204ENST00000563995 KIF15Q9NS87 1388 aa29.65■■■□□ 2.34
SLX1A-204ENST00000563995 DUOX2Q9NRD8 1548 aa29.65■■■□□ 2.34
SLX1A-204ENST00000563995 ERVK-7P63135 1459 aa29.63■■■□□ 2.33
SLX1A-204ENST00000563995 UBR1Q8IWV7 1749 aa29.62■■■□□ 2.33
SLX1A-204ENST00000563995 ITGAEP38570 1179 aa29.62■■■□□ 2.33
SLX1A-204ENST00000563995 RRP7BPQ9NSQ0 103 aa29.62■■■□□ 2.33
SLX1A-204ENST00000563995 ROCK1Q13464 1354 aa29.59■■■□□ 2.33
SLX1A-204ENST00000563995 SYNMO15061 1565 aa29.58■■■□□ 2.33
SLX1A-204ENST00000563995 SENP3Q9H4L4 574 aaPredicted RBP29.58■■■□□ 2.33
SLX1A-204ENST00000563995 ERBINQ96RT1 1412 aa29.57■■■□□ 2.32
SLX1A-204ENST00000563995 RGS17Q9UGC6 210 aaPredicted RBP29.57■■■□□ 2.32
SLX1A-204ENST00000563995 PRDM15P57071 1507 aaPredicted RBP29.55■■■□□ 2.32
SLX1A-204ENST00000563995 LRRC7Q96NW7 1537 aa29.51■■■□□ 2.32
SLX1A-204ENST00000563995 ANKRD50Q9ULJ7 1429 aa29.47■■■□□ 2.31
SLX1A-204ENST00000563995 SLIT1O75093 1534 aa29.47■■■□□ 2.31
SLX1A-204ENST00000563995 XIRP1Q702N8 1843 aaKnown RBP29.47■■■□□ 2.31
SLX1A-204ENST00000563995 ARHGAP23Q9P227 1491 aa29.47■■■□□ 2.31
SLX1A-204ENST00000563995 ARHGAP31Q2M1Z3 1444 aa29.46■■■□□ 2.31
SLX1A-204ENST00000563995 SCAF11Q99590 1463 aaKnown RBP29.46■■■□□ 2.31
SLX1A-204ENST00000563995 PIK3C2BO00750 1634 aa29.42■■■□□ 2.3
SLX1A-204ENST00000563995 KDM5AP29375 1690 aaKnown RBP29.39■■■□□ 2.3
SLX1A-204ENST00000563995 GCC2Q8IWJ2 1684 aa29.37■■■□□ 2.29
SLX1A-204ENST00000563995 HFM1A2PYH4 1435 aa29.37■■■□□ 2.29
SLX1A-204ENST00000563995 NAIPQ13075 1403 aa29.37■■■□□ 2.29
SLX1A-204ENST00000563995 POTEAQ6S8J7 498 aa29.36■■■□□ 2.29
SLX1A-204ENST00000563995 LTKP29376 864 aa29.35■■■□□ 2.29
SLX1A-204ENST00000563995 LMTK2Q8IWU2 1503 aa29.32■■■□□ 2.28
SLX1A-204ENST00000563995 UNC13BO14795 1591 aa29.31■■■□□ 2.28
SLX1A-204ENST00000563995 KANK1Q14678 1352 aa29.3■■■□□ 2.28
SLX1A-204ENST00000563995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.3■■■□□ 2.28
SLX1A-204ENST00000563995 TXNDC2Q86VQ3 553 aa29.29■■■□□ 2.28
SLX1A-204ENST00000563995 TMEM2Q9UHN6 1383 aa29.27■■■□□ 2.28
SLX1A-204ENST00000563995 EFCAB6Q5THR3 1501 aa29.27■■■□□ 2.28
SLX1A-204ENST00000563995 TET3O43151 1660 aa29.22■■■□□ 2.27
SLX1A-204ENST00000563995 EID1Q9Y6B2 187 aa29.22■■■□□ 2.27
SLX1A-204ENST00000563995 SETD1AO15047 1707 aaKnown RBP29.2■■■□□ 2.26
SLX1A-204ENST00000563995 ADGRB3O60242 1522 aa29.2■■■□□ 2.26
SLX1A-204ENST00000563995 NOS1P29475 1434 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms