RNA–Protein interactions for RNA: ENST00000560940.5

AP3S2-214, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 5 BASIC

Gene AP3S2, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-214ENST00000560940 MBD5Q9P267 1494 aa11.04□□□□□ -0.64
AP3S2-214ENST00000560940 CPS1P31327 1500 aa11.04□□□□□ -0.64
AP3S2-214ENST00000560940 EHBP1L1Q8N3D4 1523 aa11.04□□□□□ -0.64
AP3S2-214ENST00000560940 DHX29Q7Z478 1369 aaKnown RBP11.03□□□□□ -0.64
AP3S2-214ENST00000560940 KDM5DQ9BY66 1539 aa11.02□□□□□ -0.65
AP3S2-214ENST00000560940 NEURL4Q96JN8 1562 aa11.02□□□□□ -0.65
AP3S2-214ENST00000560940 PZPP20742 1482 aa11.01□□□□□ -0.65
AP3S2-214ENST00000560940 ZNF644Q9H582 1327 aaPredicted RBP11.01□□□□□ -0.65
AP3S2-214ENST00000560940 TNRQ92752 1358 aa11.01□□□□□ -0.65
AP3S2-214ENST00000560940 CEP162Q5TB80 1403 aa11.01□□□□□ -0.65
AP3S2-214ENST00000560940 SHANK2Q9UPX8 1470 aa11□□□□□ -0.65
AP3S2-214ENST00000560940 TOM1O60784 492 aa11□□□□□ -0.65
AP3S2-214ENST00000560940 RSPH4AQ5TD94 716 aa11□□□□□ -0.65
AP3S2-214ENST00000560940 CCDC141Q6ZP82 1450 aa11□□□□□ -0.65
AP3S2-214ENST00000560940 DEPDC5O75140 1603 aa10.99□□□□□ -0.65
AP3S2-214ENST00000560940 NLRP1Q9C000 1473 aa10.99□□□□□ -0.65
AP3S2-214ENST00000560940 MED1Q15648 1581 aaPredicted RBP10.99□□□□□ -0.65
AP3S2-214ENST00000560940 KIF3BO15066 747 aa10.98□□□□□ -0.65
AP3S2-214ENST00000560940 ANKLE2Q86XL3 938 aa10.98□□□□□ -0.65
AP3S2-214ENST00000560940 THEMISQ8N1K5 641 aaPredicted RBP10.98□□□□□ -0.65
AP3S2-214ENST00000560940 HSPA1LP34931 641 aa10.97□□□□□ -0.65
AP3S2-214ENST00000560940 FBXO31Q5XUX0 539 aaPredicted RBP10.97□□□□□ -0.65
AP3S2-214ENST00000560940 SCAF1Q9H7N4 1312 aaKnown RBP10.97□□□□□ -0.65
AP3S2-214ENST00000560940 WASHC2CQ9Y4E1 1318 aa10.97□□□□□ -0.65
AP3S2-214ENST00000560940 MED14O60244 1454 aa10.97□□□□□ -0.65
AP3S2-214ENST00000560940 VWDEQ8N2E2 1590 aa10.97□□□□□ -0.65
AP3S2-214ENST00000560940 UGGT1Q9NYU2 1555 aa10.97□□□□□ -0.65
AP3S2-214ENST00000560940 ZC3H13Q5T200 1668 aaKnown RBP10.96□□□□□ -0.65
AP3S2-214ENST00000560940 ARHGEF5Q12774 1597 aa10.96□□□□□ -0.65
AP3S2-214ENST00000560940 CAMSAP2Q08AD1 1489 aa10.96□□□□□ -0.65
AP3S2-214ENST00000560940 MIA2Q96PC5 1412 aa10.96□□□□□ -0.65
AP3S2-214ENST00000560940 PIP4K2BP78356 416 aa10.96□□□□□ -0.65
AP3S2-214ENST00000560940 IQGAP1P46940 1657 aa10.95□□□□□ -0.66
AP3S2-214ENST00000560940 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.95□□□□□ -0.66
AP3S2-214ENST00000560940 RNF17Q9BXT8 1623 aaKnown RBP10.95□□□□□ -0.66
AP3S2-214ENST00000560940 NCOA2Q15596 1464 aa10.94□□□□□ -0.66
AP3S2-214ENST00000560940 NPHP4O75161 1426 aaPredicted RBP10.94□□□□□ -0.66
AP3S2-214ENST00000560940 TSPY4P0CV99 314 aa10.93□□□□□ -0.66
AP3S2-214ENST00000560940 TSPY10P0CW01 314 aa10.93□□□□□ -0.66
AP3S2-214ENST00000560940 EIF2AK4Q9P2K8 1649 aaKnown RBP10.93□□□□□ -0.66
AP3S2-214ENST00000560940 SYNMO15061 1565 aa10.93□□□□□ -0.66
AP3S2-214ENST00000560940 ALKQ9UM73 1620 aa10.91□□□□□ -0.66
AP3S2-214ENST00000560940 MAST1Q9Y2H9 1570 aa10.91□□□□□ -0.66
AP3S2-214ENST00000560940 STRCP1A6NGW2 1772 aa10.91□□□□□ -0.66
AP3S2-214ENST00000560940 PIAS4Q8N2W9 510 aaPredicted RBP10.91□□□□□ -0.66
AP3S2-214ENST00000560940 ABCC3O15438 1527 aa10.9□□□□□ -0.66
AP3S2-214ENST00000560940 CFAP65Q6ZU64 1925 aaKnown RBP10.9□□□□□ -0.66
AP3S2-214ENST00000560940 UBR1Q8IWV7 1749 aa10.89□□□□□ -0.67
AP3S2-214ENST00000560940 LRRC7Q96NW7 1537 aa10.89□□□□□ -0.67
AP3S2-214ENST00000560940 ERVK-7P63135 1459 aa10.88□□□□□ -0.67
AP3S2-214ENST00000560940 CEP152O94986 1710 aa10.88□□□□□ -0.67
AP3S2-214ENST00000560940 MROH1Q8NDA8 1641 aa10.87□□□□□ -0.67
AP3S2-214ENST00000560940 SCAF11Q99590 1463 aaKnown RBP10.86□□□□□ -0.67
AP3S2-214ENST00000560940 XIRP1Q702N8 1843 aaKnown RBP10.85□□□□□ -0.67
AP3S2-214ENST00000560940 LRRC9Q6ZRR7 1453 aa10.85□□□□□ -0.67
AP3S2-214ENST00000560940 SLIT1O75093 1534 aa10.84□□□□□ -0.67
AP3S2-214ENST00000560940 DUOX2Q9NRD8 1548 aa10.84□□□□□ -0.67
AP3S2-214ENST00000560940 KDM5AP29375 1690 aaKnown RBP10.83□□□□□ -0.68
AP3S2-214ENST00000560940 ARHGAP23Q9P227 1491 aa10.83□□□□□ -0.68
AP3S2-214ENST00000560940 PRDM15P57071 1507 aaPredicted RBP10.83□□□□□ -0.68
AP3S2-214ENST00000560940 MAP3K1Q13233 1512 aa10.83□□□□□ -0.68
AP3S2-214ENST00000560940 ARHGAP31Q2M1Z3 1444 aa10.83□□□□□ -0.68
AP3S2-214ENST00000560940 MYOM3Q5VTT5 1437 aa10.82□□□□□ -0.68
AP3S2-214ENST00000560940 TXNDC2Q86VQ3 553 aa10.81□□□□□ -0.68
AP3S2-214ENST00000560940 EID1Q9Y6B2 187 aa10.81□□□□□ -0.68
AP3S2-214ENST00000560940 CROCC2H7BZ55 1655 aa10.81□□□□□ -0.68
AP3S2-214ENST00000560940 VPS8Q8N3P4 1428 aa10.81□□□□□ -0.68
AP3S2-214ENST00000560940 PIK3C2BO00750 1634 aa10.8□□□□□ -0.68
AP3S2-214ENST00000560940 ERBINQ96RT1 1412 aa10.8□□□□□ -0.68
AP3S2-214ENST00000560940 LTKP29376 864 aa10.79□□□□□ -0.68
AP3S2-214ENST00000560940 KIF15Q9NS87 1388 aa10.78□□□□□ -0.68
AP3S2-214ENST00000560940 FAM135BQ49AJ0 1406 aa10.78□□□□□ -0.68
AP3S2-214ENST00000560940 KANK1Q14678 1352 aa10.77□□□□□ -0.68
AP3S2-214ENST00000560940 TMEM2Q9UHN6 1383 aa10.77□□□□□ -0.68
AP3S2-214ENST00000560940 EFCAB6Q5THR3 1501 aa10.77□□□□□ -0.69
AP3S2-214ENST00000560940 KANK4Q5T7N3 995 aaPredicted RBP10.75□□□□□ -0.69
AP3S2-214ENST00000560940 RGS17Q9UGC6 210 aaPredicted RBP10.75□□□□□ -0.69
AP3S2-214ENST00000560940 STAG3Q9UJ98 1225 aa10.75□□□□□ -0.69
AP3S2-214ENST00000560940 PTPN23Q9H3S7 1636 aa10.75□□□□□ -0.69
AP3S2-214ENST00000560940 ROBO1Q9Y6N7 1651 aa10.75□□□□□ -0.69
AP3S2-214ENST00000560940 ABCC5O15440 1437 aa10.75□□□□□ -0.69
AP3S2-214ENST00000560940 LMTK2Q8IWU2 1503 aa10.74□□□□□ -0.69
AP3S2-214ENST00000560940 TET3O43151 1660 aa10.74□□□□□ -0.69
AP3S2-214ENST00000560940 KCNA6P17658 529 aa10.74□□□□□ -0.69
AP3S2-214ENST00000560940 TMEM94Q12767 1356 aa10.74□□□□□ -0.69
AP3S2-214ENST00000560940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.73□□□□□ -0.69
AP3S2-214ENST00000560940 RRP7BPQ9NSQ0 103 aa10.73□□□□□ -0.69
AP3S2-214ENST00000560940 NKTRP30414 1462 aaKnown RBP10.73□□□□□ -0.69
AP3S2-214ENST00000560940 NWD1Q149M9 1564 aa10.73□□□□□ -0.69
AP3S2-214ENST00000560940 DAPK1P53355 1430 aa10.72□□□□□ -0.69
AP3S2-214ENST00000560940 ADGRB3O60242 1522 aa10.72□□□□□ -0.69
AP3S2-214ENST00000560940 IDI1Q13907 227 aa10.71□□□□□ -0.69
AP3S2-214ENST00000560940 PROSER2Q86WR7 435 aaPredicted RBP10.71□□□□□ -0.69
AP3S2-214ENST00000560940 ANKRD30AQ9BXX3 1397 aa10.71□□□□□ -0.69
AP3S2-214ENST00000560940 CHD2O14647 1828 aaKnown RBP10.7□□□□□ -0.7
AP3S2-214ENST00000560940 PHLPP1O60346 1717 aa10.7□□□□□ -0.7
AP3S2-214ENST00000560940 NOS1P29475 1434 aa10.7□□□□□ -0.7
AP3S2-214ENST00000560940 FGD6Q6ZV73 1430 aa10.69□□□□□ -0.7
AP3S2-214ENST00000560940 MSH6P52701 1360 aa10.69□□□□□ -0.7
AP3S2-214ENST00000560940 SLC26A8Q96RN1 970 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms