RNA–Protein interactions for RNA: ENST00000560940.5

AP3S2-214, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 5 BASIC

Gene AP3S2, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-214ENST00000560940 NISCHQ9Y2I1 1504 aa17.37■□□□□ 0.37
AP3S2-214ENST00000560940 ABCC9O60706 1549 aa15.78■□□□□ 0.12
AP3S2-214ENST00000560940 CCDC180Q9P1Z9 1646 aa15.72■□□□□ 0.11
AP3S2-214ENST00000560940 RB1CC1Q8TDY2 1594 aa15.02■□□□□ -0
AP3S2-214ENST00000560940 DNAJC5BQ9UF47 199 aa14.93□□□□□ -0.02
AP3S2-214ENST00000560940 NACADO15069 1562 aa14.88□□□□□ -0.03
AP3S2-214ENST00000560940 UNC13AQ9UPW8 1703 aa14.7□□□□□ -0.06
AP3S2-214ENST00000560940 AEBP2Q6ZN18 517 aaPredicted RBP14.7□□□□□ -0.06
AP3S2-214ENST00000560940 DCAF8L2P0C7V8 631 aa14.66□□□□□ -0.06
AP3S2-214ENST00000560940 MYO15BQ96JP2 1530 aa14.64□□□□□ -0.07
AP3S2-214ENST00000560940 PABPN1Q86U42 306 aaKnown RBP eCLIP14.63□□□□□ -0.07
AP3S2-214ENST00000560940 CHIC1Q5VXU3 224 aa14.6□□□□□ -0.07
AP3S2-214ENST00000560940 BICRAQ9NZM4 1560 aa14.56□□□□□ -0.08
AP3S2-214ENST00000560940 SHROOM4Q9ULL8 1493 aa14.41□□□□□ -0.1
AP3S2-214ENST00000560940 DCAF1Q9Y4B6 1507 aa14.37□□□□□ -0.11
AP3S2-214ENST00000560940 ZCCHC6Q5VYS8 1495 aaKnown RBP14.35□□□□□ -0.11
AP3S2-214ENST00000560940 CC2D2AQ9P2K1 1620 aa14.3□□□□□ -0.12
AP3S2-214ENST00000560940 CECR2Q9BXF3 1484 aa14.26□□□□□ -0.13
AP3S2-214ENST00000560940 SCRIBQ14160 1630 aa14.23□□□□□ -0.13
AP3S2-214ENST00000560940 EIF4G1Q04637 1599 aaKnown RBP14.22□□□□□ -0.13
AP3S2-214ENST00000560940 DNAJC5Q9H3Z4 198 aa13.9□□□□□ -0.18
AP3S2-214ENST00000560940 CUX2O14529 1486 aa13.74□□□□□ -0.21
AP3S2-214ENST00000560940 NCAPD3P42695 1498 aa13.72□□□□□ -0.21
AP3S2-214ENST00000560940 ERCC6Q03468 1493 aa13.67□□□□□ -0.22
AP3S2-214ENST00000560940 SMARCA2P51531 1590 aa13.62□□□□□ -0.23
AP3S2-214ENST00000560940 ATAD2BQ9ULI0 1458 aa13.62□□□□□ -0.23
AP3S2-214ENST00000560940 HMGXB3Q12766 1538 aa13.62□□□□□ -0.23
AP3S2-214ENST00000560940 SMARCA4P51532 1647 aa13.59□□□□□ -0.23
AP3S2-214ENST00000560940 BAZ1AQ9NRL2 1556 aaPredicted RBP13.51□□□□□ -0.25
AP3S2-214ENST00000560940 NESP48681 1621 aa13.5□□□□□ -0.25
AP3S2-214ENST00000560940 BAZ1BQ9UIG0 1483 aaKnown RBP13.49□□□□□ -0.25
AP3S2-214ENST00000560940 PEG3Q9GZU2 1588 aa13.49□□□□□ -0.25
AP3S2-214ENST00000560940 LAMC3Q9Y6N6 1575 aa13.46□□□□□ -0.25
AP3S2-214ENST00000560940 THOC2Q8NI27 1593 aaKnown RBP13.45□□□□□ -0.26
AP3S2-214ENST00000560940 KIF21AQ7Z4S6 1674 aa13.39□□□□□ -0.27
AP3S2-214ENST00000560940 PDS5BQ9NTI5 1447 aa13.37□□□□□ -0.27
AP3S2-214ENST00000560940 MROH2BQ7Z745 1585 aa13.35□□□□□ -0.27
AP3S2-214ENST00000560940 CADPSQ9ULU8 1353 aa13.27□□□□□ -0.29
AP3S2-214ENST00000560940 MRC2Q9UBG0 1479 aa13.25□□□□□ -0.29
AP3S2-214ENST00000560940 WDR62O43379 1518 aa13.23□□□□□ -0.29
AP3S2-214ENST00000560940 WIZO95785 1651 aa13.2□□□□□ -0.3
AP3S2-214ENST00000560940 CEP164Q9UPV0 1460 aa13.17□□□□□ -0.3
AP3S2-214ENST00000560940 TRIM41Q8WV44 630 aa13.16□□□□□ -0.3
AP3S2-214ENST00000560940 FANCD2Q9BXW9 1451 aa13.12□□□□□ -0.31
AP3S2-214ENST00000560940 CFTRP13569 1480 aa13.1□□□□□ -0.31
AP3S2-214ENST00000560940 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
AP3S2-214ENST00000560940 TOP2AP11388 1531 aaKnown RBP13.03□□□□□ -0.32
AP3S2-214ENST00000560940 PRDM2Q13029 1718 aa13.03□□□□□ -0.32
AP3S2-214ENST00000560940 URB2Q14146 1524 aaKnown RBP13.02□□□□□ -0.33
AP3S2-214ENST00000560940 RSF1Q96T23 1441 aaPredicted RBP13□□□□□ -0.33
AP3S2-214ENST00000560940 RIMBP3CA6NJZ7 1639 aa12.91□□□□□ -0.34
AP3S2-214ENST00000560940 RIMBP3BA6NNM3 1639 aa12.91□□□□□ -0.34
AP3S2-214ENST00000560940 RIMBP3Q9UFD9 1639 aa12.91□□□□□ -0.34
AP3S2-214ENST00000560940 IFT140Q96RY7 1462 aa12.91□□□□□ -0.34
AP3S2-214ENST00000560940 ABCC8Q09428 1581 aa12.87□□□□□ -0.35
AP3S2-214ENST00000560940 ZNF608Q9ULD9 1512 aaPredicted RBP12.87□□□□□ -0.35
AP3S2-214ENST00000560940 TOPBP1Q92547 1522 aa12.86□□□□□ -0.35
AP3S2-214ENST00000560940 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
AP3S2-214ENST00000560940 ARHGEF11O15085 1522 aa12.85□□□□□ -0.35
AP3S2-214ENST00000560940 EIF4G3O43432 1585 aaKnown RBP12.83□□□□□ -0.36
AP3S2-214ENST00000560940 PHF23Q9BUL5 403 aaPredicted RBP12.82□□□□□ -0.36
AP3S2-214ENST00000560940 DNMBPQ6XZF7 1577 aa12.81□□□□□ -0.36
AP3S2-214ENST00000560940 CHD1O14646 1710 aa12.79□□□□□ -0.36
AP3S2-214ENST00000560940 TARBP1Q13395 1621 aaKnown RBP12.78□□□□□ -0.36
AP3S2-214ENST00000560940 CYB5RLQ6IPT4 315 aa12.73□□□□□ -0.37
AP3S2-214ENST00000560940 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.37
AP3S2-214ENST00000560940 POLA1P09884 1462 aaPredicted RBP12.71□□□□□ -0.38
AP3S2-214ENST00000560940 ARAP1Q96P48 1450 aa12.69□□□□□ -0.38
AP3S2-214ENST00000560940 WDR97A6NE52 1622 aa12.69□□□□□ -0.38
AP3S2-214ENST00000560940 FBLN2P98095 1184 aa12.67□□□□□ -0.38
AP3S2-214ENST00000560940 SOGA1O94964 1423 aa12.65□□□□□ -0.38
AP3S2-214ENST00000560940 TRHP20396 242 aaPredicted RBP12.65□□□□□ -0.38
AP3S2-214ENST00000560940 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
AP3S2-214ENST00000560940 CLASP1Q7Z460 1538 aa12.62□□□□□ -0.39
AP3S2-214ENST00000560940 SYNJ1O43426 1573 aa12.61□□□□□ -0.39
AP3S2-214ENST00000560940 MAGI1Q96QZ7 1491 aaPredicted RBP12.61□□□□□ -0.39
AP3S2-214ENST00000560940 TDRD9Q8NDG6 1382 aaKnown RBP12.61□□□□□ -0.39
AP3S2-214ENST00000560940 SNAPC4Q5SXM2 1469 aa12.6□□□□□ -0.39
AP3S2-214ENST00000560940 FGD5Q6ZNL6 1462 aa12.59□□□□□ -0.39
AP3S2-214ENST00000560940 CHMP7Q8WUX9 453 aaPredicted RBP12.58□□□□□ -0.4
AP3S2-214ENST00000560940 GRIN2BQ13224 1484 aa12.58□□□□□ -0.4
AP3S2-214ENST00000560940 SYNJ2O15056 1496 aa12.56□□□□□ -0.4
AP3S2-214ENST00000560940 CUX1P39880 1505 aa12.56□□□□□ -0.4
AP3S2-214ENST00000560940 PBRM1Q86U86 1689 aa12.54□□□□□ -0.4
AP3S2-214ENST00000560940 SENP3Q9H4L4 574 aaPredicted RBP12.52□□□□□ -0.41
AP3S2-214ENST00000560940 GAPVD1Q14C86 1478 aa12.5□□□□□ -0.41
AP3S2-214ENST00000560940 ABCA5Q8WWZ7 1642 aa12.48□□□□□ -0.41
AP3S2-214ENST00000560940 ABCA10Q8WWZ4 1543 aa12.47□□□□□ -0.41
AP3S2-214ENST00000560940 GRIN2AQ12879 1464 aa12.4□□□□□ -0.42
AP3S2-214ENST00000560940 ADAMTS12P58397 1594 aa12.39□□□□□ -0.43
AP3S2-214ENST00000560940 WRNQ14191 1432 aaPredicted RBP eCLIP12.38□□□□□ -0.43
AP3S2-214ENST00000560940 CEP170Q5SW79 1584 aa12.37□□□□□ -0.43
AP3S2-214ENST00000560940 ERCC6L2Q5T890 1561 aa12.37□□□□□ -0.43
AP3S2-214ENST00000560940 SHROOM2Q13796 1616 aa12.37□□□□□ -0.43
AP3S2-214ENST00000560940 NUP160Q12769 1436 aa12.37□□□□□ -0.43
AP3S2-214ENST00000560940 BIVM-ERCC5R4GMW8 1640 aa12.36□□□□□ -0.43
AP3S2-214ENST00000560940 TOP2BQ02880 1626 aa12.34□□□□□ -0.43
AP3S2-214ENST00000560940 FHAD1B1AJZ9 1412 aa12.34□□□□□ -0.43
AP3S2-214ENST00000560940 ERICH3Q5RHP9 1530 aa12.32□□□□□ -0.44
AP3S2-214ENST00000560940 KIF13AQ9H1H9 1805 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms