RNA–Protein interactions for RNA: ENST00000560190.5

TCF12-215, Transcript of transcription factor 12, humanhuman

TSL 1 (best)

Gene TCF12, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-215ENST00000560190 PKD2Q13563 968 aa30.23■■■□□ 2.43
TCF12-215ENST00000560190 PZPP20742 1482 aa30.23■■■□□ 2.43
TCF12-215ENST00000560190 DISP3Q9P2K9 1392 aa30.22■■■□□ 2.43
TCF12-215ENST00000560190 KIF3BO15066 747 aa30.21■■■□□ 2.43
TCF12-215ENST00000560190 POLR1AO95602 1720 aaPredicted RBP30.21■■■□□ 2.43
TCF12-215ENST00000560190 VPS8Q8N3P4 1428 aa30.21■■■□□ 2.43
TCF12-215ENST00000560190 SPATA31D1Q6ZQQ2 1576 aa30.2■■■□□ 2.43
TCF12-215ENST00000560190 LRRC9Q6ZRR7 1453 aa30.19■■■□□ 2.42
TCF12-215ENST00000560190 TNRQ92752 1358 aa30.18■■■□□ 2.42
TCF12-215ENST00000560190 NEURL4Q96JN8 1562 aa30.18■■■□□ 2.42
TCF12-215ENST00000560190 FBXO31Q5XUX0 539 aaPredicted RBP30.16■■■□□ 2.42
TCF12-215ENST00000560190 RSPH4AQ5TD94 716 aa30.14■■■□□ 2.42
TCF12-215ENST00000560190 MAST1Q9Y2H9 1570 aa30.14■■■□□ 2.42
TCF12-215ENST00000560190 RNF17Q9BXT8 1623 aaKnown RBP30.14■■■□□ 2.41
TCF12-215ENST00000560190 ILDR2Q71H61 639 aa30.11■■■□□ 2.41
TCF12-215ENST00000560190 WASHC2CQ9Y4E1 1318 aa30.1■■■□□ 2.41
TCF12-215ENST00000560190 ZC3H13Q5T200 1668 aaKnown RBP30.07■■■□□ 2.41
TCF12-215ENST00000560190 EIF2AK4Q9P2K8 1649 aaKnown RBP30.07■■■□□ 2.4
TCF12-215ENST00000560190 ABCC3O15438 1527 aa30.06■■■□□ 2.4
TCF12-215ENST00000560190 MAP3K1Q13233 1512 aa30.06■■■□□ 2.4
TCF12-215ENST00000560190 NLRP1Q9C000 1473 aa30.06■■■□□ 2.4
TCF12-215ENST00000560190 MROH1Q8NDA8 1641 aa30.05■■■□□ 2.4
TCF12-215ENST00000560190 UBAP1LF5GYI3 381 aa30.05■■■□□ 2.4
TCF12-215ENST00000560190 TSPY4P0CV99 314 aa30.05■■■□□ 2.4
TCF12-215ENST00000560190 TSPY10P0CW01 314 aa30.05■■■□□ 2.4
TCF12-215ENST00000560190 MIA2Q96PC5 1412 aa30.04■■■□□ 2.4
TCF12-215ENST00000560190 UGGT1Q9NYU2 1555 aa30.03■■■□□ 2.4
TCF12-215ENST00000560190 MYOM3Q5VTT5 1437 aa30.03■■■□□ 2.4
TCF12-215ENST00000560190 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.03■■■□□ 2.46e-8■■■■□ 21.9
TCF12-215ENST00000560190 KANK4Q5T7N3 995 aaPredicted RBP30.02■■■□□ 2.4
TCF12-215ENST00000560190 CEP152O94986 1710 aa30■■■□□ 2.39
TCF12-215ENST00000560190 CPS1P31327 1500 aa30■■■□□ 2.39
TCF12-215ENST00000560190 DEPDC5O75140 1603 aa30■■■□□ 2.39
TCF12-215ENST00000560190 VWDEQ8N2E2 1590 aa29.98■■■□□ 2.39
TCF12-215ENST00000560190 SHANK2Q9UPX8 1470 aa29.98■■■□□ 2.39
TCF12-215ENST00000560190 ERVK-7P63135 1459 aa29.96■■■□□ 2.39
TCF12-215ENST00000560190 CROCC2H7BZ55 1655 aa29.95■■■□□ 2.39
TCF12-215ENST00000560190 MED14O60244 1454 aa29.94■■■□□ 2.38
TCF12-215ENST00000560190 IQGAP1P46940 1657 aa29.94■■■□□ 2.38
TCF12-215ENST00000560190 NPHP4O75161 1426 aaPredicted RBP29.93■■■□□ 2.38
TCF12-215ENST00000560190 DUOX2Q9NRD8 1548 aa29.92■■■□□ 2.38
TCF12-215ENST00000560190 ANKLE2Q86XL3 938 aa29.92■■■□□ 2.38
TCF12-215ENST00000560190 THEMISQ8N1K5 641 aaPredicted RBP29.92■■■□□ 2.38
TCF12-215ENST00000560190 SOCS7O14512 581 aa29.89■■■□□ 2.38
TCF12-215ENST00000560190 PRDM15P57071 1507 aaPredicted RBP29.89■■■□□ 2.38
TCF12-215ENST00000560190 CFAP65Q6ZU64 1925 aaKnown RBP29.88■■■□□ 2.37
TCF12-215ENST00000560190 PTPN23Q9H3S7 1636 aa29.87■■■□□ 2.37
TCF12-215ENST00000560190 UBR1Q8IWV7 1749 aa29.87■■■□□ 2.37
TCF12-215ENST00000560190 STRCP1A6NGW2 1772 aa29.86■■■□□ 2.37
TCF12-215ENST00000560190 KIF15Q9NS87 1388 aa29.84■■■□□ 2.37
TCF12-215ENST00000560190 ALKQ9UM73 1620 aa29.84■■■□□ 2.37
TCF12-215ENST00000560190 ABCC5O15440 1437 aa29.83■■■□□ 2.37
TCF12-215ENST00000560190 SCAF1Q9H7N4 1312 aaKnown RBP29.82■■■□□ 2.36
TCF12-215ENST00000560190 ERBINQ96RT1 1412 aa29.81■■■□□ 2.36
TCF12-215ENST00000560190 PIP4K2BP78356 416 aa29.81■■■□□ 2.36
TCF12-215ENST00000560190 SYNMO15061 1565 aa29.79■■■□□ 2.36
TCF12-215ENST00000560190 HSPA1LP34931 641 aa29.78■■■□□ 2.36
TCF12-215ENST00000560190 DAPK1P53355 1430 aa29.77■■■□□ 2.36
TCF12-215ENST00000560190 TOM1O60784 492 aa29.76■■■□□ 2.35
TCF12-215ENST00000560190 ARHGAP31Q2M1Z3 1444 aa29.76■■■□□ 2.35
TCF12-215ENST00000560190 MED1Q15648 1581 aaPredicted RBP29.76■■■□□ 2.35
TCF12-215ENST00000560190 FGD6Q6ZV73 1430 aa29.75■■■□□ 2.35
TCF12-215ENST00000560190 SCAF11Q99590 1463 aaKnown RBP29.74■■■□□ 2.35
TCF12-215ENST00000560190 LRRC7Q96NW7 1537 aa29.74■■■□□ 2.35
TCF12-215ENST00000560190 RRP7BPQ9NSQ0 103 aa29.73■■■□□ 2.35
TCF12-215ENST00000560190 ARHGAP23Q9P227 1491 aa29.73■■■□□ 2.35
TCF12-215ENST00000560190 SLIT1O75093 1534 aa29.72■■■□□ 2.35
TCF12-215ENST00000560190 PIK3C2BO00750 1634 aa29.71■■■□□ 2.35
TCF12-215ENST00000560190 APLP2Q06481 763 aa29.65■■■□□ 2.34
TCF12-215ENST00000560190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.65■■■□□ 2.341e-7■■□□□ 12.6
TCF12-215ENST00000560190 LMTK2Q8IWU2 1503 aa29.65■■■□□ 2.34
TCF12-215ENST00000560190 LTKP29376 864 aa29.64■■■□□ 2.34
TCF12-215ENST00000560190 XIRP1Q702N8 1843 aaKnown RBP29.61■■■□□ 2.33
TCF12-215ENST00000560190 KANK1Q14678 1352 aa29.61■■■□□ 2.33
TCF12-215ENST00000560190 KDM5AP29375 1690 aaKnown RBP29.6■■■□□ 2.33
TCF12-215ENST00000560190 ANKRD30AQ9BXX3 1397 aa29.6■■■□□ 2.33
TCF12-215ENST00000560190 EFCAB6Q5THR3 1501 aa29.6■■■□□ 2.33
TCF12-215ENST00000560190 TXNDC2Q86VQ3 553 aa29.59■■■□□ 2.33
TCF12-215ENST00000560190 CHIC2Q9UKJ5 165 aa29.58■■■□□ 2.33
TCF12-215ENST00000560190 TMEM2Q9UHN6 1383 aa29.57■■■□□ 2.32
TCF12-215ENST00000560190 ADGRL2O95490 1459 aa29.56■■■□□ 2.32
TCF12-215ENST00000560190 ADGRB3O60242 1522 aa29.52■■■□□ 2.32
TCF12-215ENST00000560190 SENP3Q9H4L4 574 aaPredicted RBP29.52■■■□□ 2.32
TCF12-215ENST00000560190 EID1Q9Y6B2 187 aa29.52■■■□□ 2.32
TCF12-215ENST00000560190 NOS1P29475 1434 aa29.52■■■□□ 2.32
TCF12-215ENST00000560190 IDI1Q13907 227 aa29.48■■■□□ 2.31
TCF12-215ENST00000560190 STAG3Q9UJ98 1225 aa29.48■■■□□ 2.31
TCF12-215ENST00000560190 TET3O43151 1660 aa29.46■■■□□ 2.31
TCF12-215ENST00000560190 ANKRD50Q9ULJ7 1429 aa29.42■■■□□ 2.3
TCF12-215ENST00000560190 MYO5BQ9ULV0 1848 aa29.41■■■□□ 2.3
TCF12-215ENST00000560190 NWD1Q149M9 1564 aa29.4■■■□□ 2.3
TCF12-215ENST00000560190 FAM50AQ14320 339 aaKnown RBP29.4■■■□□ 2.3
TCF12-215ENST00000560190 PHF23Q9BUL5 403 aaPredicted RBP29.4■■■□□ 2.3
TCF12-215ENST00000560190 RPRD2Q5VT52 1461 aaKnown RBP29.4■■■□□ 2.3
TCF12-215ENST00000560190 TMEM94Q12767 1356 aa29.39■■■□□ 2.3
TCF12-215ENST00000560190 GCC2Q8IWJ2 1684 aa29.38■■■□□ 2.29
TCF12-215ENST00000560190 PPARGC1BQ86YN6 1023 aaKnown RBP29.38■■■□□ 2.29
TCF12-215ENST00000560190 UNC13BO14795 1591 aa29.37■■■□□ 2.29
TCF12-215ENST00000560190 SLC26A8Q96RN1 970 aa29.36■■■□□ 2.29
TCF12-215ENST00000560190 NKTRP30414 1462 aaKnown RBP29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms