RNA–Protein interactions for RNA: ENST00000556908.5

COCH-210, Transcript of cochlin, humanhuman

TSL 3

Gene COCH, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-210ENST00000556908 TCOF1Q13428 1488 aaKnown RBP30.32■■■□□ 2.44
COCH-210ENST00000556908 PTPRTO14522 1441 aa30.32■■■□□ 2.44
COCH-210ENST00000556908 CERKQ8TCT0 537 aa30.32■■■□□ 2.44
COCH-210ENST00000556908 PTPN23Q9H3S7 1636 aa30.3■■■□□ 2.44
COCH-210ENST00000556908 KDM5DQ9BY66 1539 aa30.28■■■□□ 2.44
COCH-210ENST00000556908 FAM135AQ9P2D6 1515 aa30.28■■■□□ 2.44
COCH-210ENST00000556908 PZPP20742 1482 aa30.27■■■□□ 2.44
COCH-210ENST00000556908 RRP7BPQ9NSQ0 103 aa30.27■■■□□ 2.44
COCH-210ENST00000556908 DAPK1P53355 1430 aa30.27■■■□□ 2.44
COCH-210ENST00000556908 NCKAP5LQ9HCH0 1330 aa30.26■■■□□ 2.44
COCH-210ENST00000556908 CAMSAP1Q5T5Y3 1602 aa30.25■■■□□ 2.43
COCH-210ENST00000556908 SHANK2Q9UPX8 1470 aa30.25■■■□□ 2.43
COCH-210ENST00000556908 KIF15Q9NS87 1388 aa30.24■■■□□ 2.43
COCH-210ENST00000556908 TNRQ92752 1358 aa30.23■■■□□ 2.43
COCH-210ENST00000556908 DUOX2Q9NRD8 1548 aa30.22■■■□□ 2.43
COCH-210ENST00000556908 MYO3AQ8NEV4 1616 aa30.22■■■□□ 2.43
COCH-210ENST00000556908 RNF17Q9BXT8 1623 aaKnown RBP30.22■■■□□ 2.43
COCH-210ENST00000556908 CEP170BQ9Y4F5 1589 aaPredicted RBP30.21■■■□□ 2.43
COCH-210ENST00000556908 A2ML1A8K2U0 1454 aa30.2■■■□□ 2.43
COCH-210ENST00000556908 CHIC2Q9UKJ5 165 aa30.2■■■□□ 2.43
COCH-210ENST00000556908 ABCC3O15438 1527 aa30.19■■■□□ 2.42
COCH-210ENST00000556908 PKD2Q13563 968 aa30.19■■■□□ 2.42
COCH-210ENST00000556908 PLA2R1Q13018 1463 aa30.19■■■□□ 2.42
COCH-210ENST00000556908 MROH1Q8NDA8 1641 aa30.18■■■□□ 2.42
COCH-210ENST00000556908 ZNF142P52746 1687 aaPredicted RBP30.17■■■□□ 2.42
COCH-210ENST00000556908 DNMT1P26358 1616 aaKnown RBP30.17■■■□□ 2.42
COCH-210ENST00000556908 EIF2AK4Q9P2K8 1649 aaKnown RBP30.17■■■□□ 2.42
COCH-210ENST00000556908 ERBINQ96RT1 1412 aa30.14■■■□□ 2.42
COCH-210ENST00000556908 CROCC2H7BZ55 1655 aa30.12■■■□□ 2.41
COCH-210ENST00000556908 ANKRD30AQ9BXX3 1397 aa30.12■■■□□ 2.41
COCH-210ENST00000556908 FAM50AQ14320 339 aaKnown RBP30.11■■■□□ 2.41
COCH-210ENST00000556908 LTBP4Q8N2S1 1624 aa30.1■■■□□ 2.41
COCH-210ENST00000556908 THEMISQ8N1K5 641 aaPredicted RBP30.07■■■□□ 2.4
COCH-210ENST00000556908 NLRP1Q9C000 1473 aa30.06■■■□□ 2.4
COCH-210ENST00000556908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.06■■■□□ 2.4
COCH-210ENST00000556908 ADGRL2O95490 1459 aa30.06■■■□□ 2.4
COCH-210ENST00000556908 SPATA31D1Q6ZQQ2 1576 aa30.05■■■□□ 2.4
COCH-210ENST00000556908 ARHGAP31Q2M1Z3 1444 aa30.05■■■□□ 2.4
COCH-210ENST00000556908 ERVK-7P63135 1459 aa30.04■■■□□ 2.4
COCH-210ENST00000556908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.03■■■□□ 2.4
COCH-210ENST00000556908 ZNF335Q9H4Z2 1342 aaPredicted RBP30.03■■■□□ 2.4
COCH-210ENST00000556908 PRDM15P57071 1507 aaPredicted RBP30.03■■■□□ 2.4
COCH-210ENST00000556908 ZC3H13Q5T200 1668 aaKnown RBP30.03■■■□□ 2.4
COCH-210ENST00000556908 PPARGC1BQ86YN6 1023 aaKnown RBP30.02■■■□□ 2.4
COCH-210ENST00000556908 ANKLE2Q86XL3 938 aa30■■■□□ 2.39
COCH-210ENST00000556908 UGGT1Q9NYU2 1555 aa29.98■■■□□ 2.39
COCH-210ENST00000556908 DEPDC5O75140 1603 aa29.97■■■□□ 2.39
COCH-210ENST00000556908 CEP152O94986 1710 aa29.96■■■□□ 2.39
COCH-210ENST00000556908 VWDEQ8N2E2 1590 aa29.95■■■□□ 2.39
COCH-210ENST00000556908 KANK1Q14678 1352 aa29.94■■■□□ 2.38
COCH-210ENST00000556908 NEURL4Q96JN8 1562 aa29.94■■■□□ 2.38
COCH-210ENST00000556908 LMTK2Q8IWU2 1503 aa29.93■■■□□ 2.38
COCH-210ENST00000556908 ANKRD50Q9ULJ7 1429 aa29.93■■■□□ 2.38
COCH-210ENST00000556908 MED14O60244 1454 aa29.9■■■□□ 2.38
COCH-210ENST00000556908 IQSEC2Q5JU85 1478 aa29.88■■■□□ 2.37
COCH-210ENST00000556908 IDI1Q13907 227 aa29.86■■■□□ 2.37
COCH-210ENST00000556908 ROCK1Q13464 1354 aa29.86■■■□□ 2.37
COCH-210ENST00000556908 LTKP29376 864 aa29.85■■■□□ 2.37
COCH-210ENST00000556908 NPHP4O75161 1426 aaPredicted RBP29.85■■■□□ 2.37
COCH-210ENST00000556908 CFAP65Q6ZU64 1925 aaKnown RBP29.84■■■□□ 2.37
COCH-210ENST00000556908 NOS1P29475 1434 aa29.82■■■□□ 2.36
COCH-210ENST00000556908 ARHGAP23Q9P227 1491 aa29.8■■■□□ 2.36
COCH-210ENST00000556908 POLR1AO95602 1720 aaPredicted RBP29.79■■■□□ 2.36
COCH-210ENST00000556908 ITGAEP38570 1179 aa29.78■■■□□ 2.36
COCH-210ENST00000556908 TXNDC2Q86VQ3 553 aa29.78■■■□□ 2.36
COCH-210ENST00000556908 UBR1Q8IWV7 1749 aa29.78■■■□□ 2.36
COCH-210ENST00000556908 SLIT1O75093 1534 aa29.76■■■□□ 2.36
COCH-210ENST00000556908 EFCAB6Q5THR3 1501 aa29.76■■■□□ 2.36
COCH-210ENST00000556908 SLC52A1Q9NWF4 448 aa29.74■■■□□ 2.35
COCH-210ENST00000556908 TMEM2Q9UHN6 1383 aa29.74■■■□□ 2.35
COCH-210ENST00000556908 SYNMO15061 1565 aa29.73■■■□□ 2.35
COCH-210ENST00000556908 UBAP1LF5GYI3 381 aa29.71■■■□□ 2.35
COCH-210ENST00000556908 SCAF11Q99590 1463 aaKnown RBP29.71■■■□□ 2.35
COCH-210ENST00000556908 RRBP1Q9P2E9 1410 aaKnown RBP29.71■■■□□ 2.35
COCH-210ENST00000556908 PIK3C2BO00750 1634 aa29.7■■■□□ 2.34
COCH-210ENST00000556908 RPRD2Q5VT52 1461 aaKnown RBP29.69■■■□□ 2.34
COCH-210ENST00000556908 CPS1P31327 1500 aa29.69■■■□□ 2.34
COCH-210ENST00000556908 STAG3Q9UJ98 1225 aa29.68■■■□□ 2.34
COCH-210ENST00000556908 EID1Q9Y6B2 187 aa29.68■■■□□ 2.34
COCH-210ENST00000556908 IQGAP1P46940 1657 aa29.66■■■□□ 2.34
COCH-210ENST00000556908 UNC13BO14795 1591 aa29.65■■■□□ 2.34
COCH-210ENST00000556908 NUP155O75694 1391 aa29.64■■■□□ 2.33
COCH-210ENST00000556908 TET3O43151 1660 aa29.61■■■□□ 2.33
COCH-210ENST00000556908 KDM5AP29375 1690 aaKnown RBP29.6■■■□□ 2.33
COCH-210ENST00000556908 LRRC7Q96NW7 1537 aa29.56■■■□□ 2.32
COCH-210ENST00000556908 STRCP1A6NGW2 1772 aa29.56■■■□□ 2.32
COCH-210ENST00000556908 ADGRB3O60242 1522 aa29.55■■■□□ 2.32
COCH-210ENST00000556908 TOM1O60784 492 aa29.55■■■□□ 2.32
COCH-210ENST00000556908 IQGAP3Q86VI3 1631 aa29.54■■■□□ 2.32
COCH-210ENST00000556908 NAIPQ13075 1403 aa29.53■■■□□ 2.32
COCH-210ENST00000556908 SLC26A8Q96RN1 970 aa29.52■■■□□ 2.32
COCH-210ENST00000556908 ZFYVE9O95405 1425 aa29.52■■■□□ 2.32
COCH-210ENST00000556908 E9PCH4 1651 aa29.51■■■□□ 2.31
COCH-210ENST00000556908 GCC2Q8IWJ2 1684 aa29.5■■■□□ 2.31
COCH-210ENST00000556908 ALKQ9UM73 1620 aa29.49■■■□□ 2.31
COCH-210ENST00000556908 PIP4K2BP78356 416 aa29.48■■■□□ 2.31
COCH-210ENST00000556908 TMEM131LA2VDJ0 1609 aa29.47■■■□□ 2.31
COCH-210ENST00000556908 KCNA6P17658 529 aa29.47■■■□□ 2.31
COCH-210ENST00000556908 RIMS2Q9UQ26 1411 aa29.45■■■□□ 2.31
COCH-210ENST00000556908 CHGAP10645 457 aaKnown RBP29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms