RNA–Protein interactions for RNA: ENST00000553247.1

LINC02407-202, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 3 BASIC

Gene LINC02407, Length 1,083 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-202ENST00000553247 PDAP1Q13442 181 aaKnown RBP13.69□□□□□ -0.22
LINC02407-202ENST00000553247 KCTD12Q96CX2 325 aaKnown RBP13.68□□□□□ -0.22
LINC02407-202ENST00000553247 CHRM1P11229 460 aaPredicted RBP13.67□□□□□ -0.22
LINC02407-202ENST00000553247 PRXQ9BXM0 1461 aa13.65□□□□□ -0.22
LINC02407-202ENST00000553247 CARMIL2Q6F5E8 1435 aa13.64□□□□□ -0.23
LINC02407-202ENST00000553247 PTPRGP23470 1445 aa13.64□□□□□ -0.23
LINC02407-202ENST00000553247 MICALL2Q8IY33 904 aa13.63□□□□□ -0.23
LINC02407-202ENST00000553247 TNIKQ9UKE5 1360 aa13.62□□□□□ -0.23
LINC02407-202ENST00000553247 GSE1Q14687 1217 aa13.62□□□□□ -0.23
LINC02407-202ENST00000553247 IQGAP2Q13576 1575 aa13.62□□□□□ -0.23
LINC02407-202ENST00000553247 UGGT2Q9NYU1 1516 aa13.59□□□□□ -0.23
LINC02407-202ENST00000553247 DISP1Q96F81 1524 aa13.59□□□□□ -0.23
LINC02407-202ENST00000553247 HRO43593 1189 aa13.58□□□□□ -0.24
LINC02407-202ENST00000553247 EEA1Q15075 1411 aa13.57□□□□□ -0.24
LINC02407-202ENST00000553247 TK2O00142 265 aa13.57□□□□□ -0.24
LINC02407-202ENST00000553247 ARHGAP33O14559 1287 aa13.57□□□□□ -0.24
LINC02407-202ENST00000553247 ADCY10Q96PN6 1610 aa13.55□□□□□ -0.24
LINC02407-202ENST00000553247 UHRF1BP1LA0JNW5 1464 aa13.55□□□□□ -0.24
LINC02407-202ENST00000553247 MAPKBP1O60336 1514 aa13.54□□□□□ -0.24
LINC02407-202ENST00000553247 NUDT7P0C024 238 aa13.54□□□□□ -0.24
LINC02407-202ENST00000553247 LHX6Q9UPM6 363 aa13.54□□□□□ -0.24
LINC02407-202ENST00000553247 KIF13AQ9H1H9 1805 aa13.53□□□□□ -0.24
LINC02407-202ENST00000553247 UACAQ9BZF9 1416 aa13.53□□□□□ -0.24
LINC02407-202ENST00000553247 PTPN5P54829 565 aa13.52□□□□□ -0.25
LINC02407-202ENST00000553247 STAC3Q96MF2 364 aa13.52□□□□□ -0.25
LINC02407-202ENST00000553247 ABCC10Q5T3U5 1492 aa13.52□□□□□ -0.25
LINC02407-202ENST00000553247 FAM69CQ0P6D2 419 aa13.51□□□□□ -0.25
LINC02407-202ENST00000553247 ABCC2Q92887 1545 aa13.5□□□□□ -0.25
LINC02407-202ENST00000553247 GOLGA3Q08378 1498 aa13.5□□□□□ -0.25
LINC02407-202ENST00000553247 TTBK1Q5TCY1 1321 aaPredicted RBP13.5□□□□□ -0.25
LINC02407-202ENST00000553247 KIAA0556O60303 1618 aa13.48□□□□□ -0.25
LINC02407-202ENST00000553247 CTTNBP2Q8WZ74 1663 aa13.47□□□□□ -0.25
LINC02407-202ENST00000553247 KDM5BQ9UGL1 1544 aa13.46□□□□□ -0.25
LINC02407-202ENST00000553247 TRAF7Q6Q0C0 670 aa13.46□□□□□ -0.25
LINC02407-202ENST00000553247 PLB1Q6P1J6 1458 aa13.45□□□□□ -0.26
LINC02407-202ENST00000553247 FAM9AQ8IZU1 332 aaPredicted RBP13.45□□□□□ -0.26
LINC02407-202ENST00000553247 LCE2BO14633 110 aa13.43□□□□□ -0.26
LINC02407-202ENST00000553247 LAPTM4AQ15012 233 aa13.43□□□□□ -0.26
LINC02407-202ENST00000553247 ASXL2Q76L83 1435 aa13.43□□□□□ -0.26
LINC02407-202ENST00000553247 DIP2BQ9P265 1576 aa13.43□□□□□ -0.26
LINC02407-202ENST00000553247 KDM4FA0A1W2PPD8 638 aa13.42□□□□□ -0.26
LINC02407-202ENST00000553247 EFCAB3Q8N7B9 438 aa13.4□□□□□ -0.26
LINC02407-202ENST00000553247 DMRTA1Q5VZB9 504 aa13.39□□□□□ -0.27
LINC02407-202ENST00000553247 ABCA8O94911 1581 aa13.39□□□□□ -0.27
LINC02407-202ENST00000553247 GLI2P10070 1586 aa13.39□□□□□ -0.27
LINC02407-202ENST00000553247 P3H3Q8IVL6 736 aa13.38□□□□□ -0.27
LINC02407-202ENST00000553247 KIF21BO75037 1637 aa13.38□□□□□ -0.27
LINC02407-202ENST00000553247 SAMD9Q5K651 1589 aa13.36□□□□□ -0.27
LINC02407-202ENST00000553247 EPRSP07814 1512 aaKnown RBP13.35□□□□□ -0.27
LINC02407-202ENST00000553247 PSDA5PKW4 1024 aaPredicted RBP13.34□□□□□ -0.27
LINC02407-202ENST00000553247 ZCCHC11Q5TAX3 1644 aaKnown RBP13.34□□□□□ -0.27
LINC02407-202ENST00000553247 PSEN2P49810 448 aa13.33□□□□□ -0.28
LINC02407-202ENST00000553247 ATP10BO94823 1461 aa13.32□□□□□ -0.28
LINC02407-202ENST00000553247 WDR7Q9Y4E6 1490 aa13.32□□□□□ -0.28
LINC02407-202ENST00000553247 UBTFP17480 764 aaKnown RBP13.32□□□□□ -0.28
LINC02407-202ENST00000553247 PCDHGA4Q9Y5G9 962 aa13.3□□□□□ -0.28
LINC02407-202ENST00000553247 RANGAP1P46060 587 aaPredicted RBP13.29□□□□□ -0.28
LINC02407-202ENST00000553247 EHMT2Q96KQ7 1210 aa13.29□□□□□ -0.28
LINC02407-202ENST00000553247 KCNH8Q96L42 1107 aa13.29□□□□□ -0.28
LINC02407-202ENST00000553247 TSPOAP1O95153 1857 aa13.28□□□□□ -0.28
LINC02407-202ENST00000553247 EFCAB5A4FU69 1503 aa13.28□□□□□ -0.28
LINC02407-202ENST00000553247 FHOD3Q2V2M9 1422 aa13.27□□□□□ -0.29
LINC02407-202ENST00000553247 ZNF775Q96BV0 537 aaPredicted RBP13.26□□□□□ -0.29
LINC02407-202ENST00000553247 MAP3K4Q9Y6R4 1608 aa13.26□□□□□ -0.29
LINC02407-202ENST00000553247 PPRC1Q5VV67 1664 aaKnown RBP13.25□□□□□ -0.29
LINC02407-202ENST00000553247 CD109Q6YHK3 1445 aa13.25□□□□□ -0.29
LINC02407-202ENST00000553247 ZNF787Q6DD87 383 aa13.25□□□□□ -0.29
LINC02407-202ENST00000553247 THSD4Q6ZMP0 1018 aa13.25□□□□□ -0.29
LINC02407-202ENST00000553247 MAGI3Q5TCQ9 1506 aa13.24□□□□□ -0.29
LINC02407-202ENST00000553247 NUP153P49790 1475 aaKnown RBP13.24□□□□□ -0.29
LINC02407-202ENST00000553247 TEX14Q8IWB6 1497 aa13.24□□□□□ -0.29
LINC02407-202ENST00000553247 RAPGEF6Q8TEU7 1601 aa13.24□□□□□ -0.29
LINC02407-202ENST00000553247 COL17A1Q9UMD9 1497 aaPredicted RBP13.23□□□□□ -0.29
LINC02407-202ENST00000553247 ARID3CA6NKF2 412 aa13.23□□□□□ -0.29
LINC02407-202ENST00000553247 GFRA3O60609 400 aa13.23□□□□□ -0.29
LINC02407-202ENST00000553247 KDM6BO15054 1643 aa13.23□□□□□ -0.29
LINC02407-202ENST00000553247 PLEKHD1A6NEE1 506 aa13.22□□□□□ -0.29
LINC02407-202ENST00000553247 SLC34A2O95436 690 aa13.21□□□□□ -0.29
LINC02407-202ENST00000553247 ARHGAP35Q9NRY4 1499 aa13.21□□□□□ -0.3
LINC02407-202ENST00000553247 KLHL34Q8N239 644 aa13.2□□□□□ -0.3
LINC02407-202ENST00000553247 MS4A4AQ96JQ5 239 aa13.2□□□□□ -0.3
LINC02407-202ENST00000553247 FMN1Q68DA7 1419 aa13.2□□□□□ -0.3
LINC02407-202ENST00000553247 PHLDB1Q86UU1 1377 aa13.2□□□□□ -0.3
LINC02407-202ENST00000553247 CFAP43Q8NDM7 1665 aa13.19□□□□□ -0.3
LINC02407-202ENST00000553247 SOX12O15370 315 aa13.19□□□□□ -0.3
LINC02407-202ENST00000553247 HECW2Q9P2P5 1572 aa13.16□□□□□ -0.3
LINC02407-202ENST00000553247 ABCA9Q8IUA7 1624 aa13.15□□□□□ -0.3
LINC02407-202ENST00000553247 ARAP3Q8WWN8 1544 aa13.14□□□□□ -0.31
LINC02407-202ENST00000553247 CDK11AQ9UQ88 783 aaPredicted RBP13.14□□□□□ -0.31
LINC02407-202ENST00000553247 VPS9D1Q9Y2B5 631 aa13.13□□□□□ -0.31
LINC02407-202ENST00000553247 ADGRL1O94910 1474 aa13.12□□□□□ -0.31
LINC02407-202ENST00000553247 NEO1Q92859 1461 aa13.11□□□□□ -0.31
LINC02407-202ENST00000553247 LOC100996750A0A140TA64 210 aa13.11□□□□□ -0.31
LINC02407-202ENST00000553247 KIF3CO14782 793 aa13.11□□□□□ -0.31
LINC02407-202ENST00000553247 ITGBL1O95965 494 aaPredicted RBP13.11□□□□□ -0.31
LINC02407-202ENST00000553247 KRTAP4-6Q9BYQ5 205 aa13.11□□□□□ -0.31
LINC02407-202ENST00000553247 ATP1B4Q9UN42 357 aaPredicted RBP13.1□□□□□ -0.31
LINC02407-202ENST00000553247 WNT2BQ93097 391 aa13.09□□□□□ -0.31
LINC02407-202ENST00000553247 CASKIN1Q8WXD9 1431 aa13.08□□□□□ -0.32
LINC02407-202ENST00000553247 C2orf72A6NCS6 295 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms