RNA–Protein interactions for RNA: ENST00000553247.1

LINC02407-202, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 3 BASIC

Gene LINC02407, Length 1,083 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-202ENST00000553247 AEBP2Q6ZN18 517 aaPredicted RBP34.1■■■■□ 3.05
LINC02407-202ENST00000553247 CHIC1Q5VXU3 224 aa31.93■■■□□ 2.7
LINC02407-202ENST00000553247 SENP3Q9H4L4 574 aaPredicted RBP29.41■■■□□ 2.3
LINC02407-202ENST00000553247 PHF23Q9BUL5 403 aaPredicted RBP28.79■■■□□ 2.2
LINC02407-202ENST00000553247 POTEDQ86YR6 584 aa28.51■■■□□ 2.15
LINC02407-202ENST00000553247 FOXD1Q16676 465 aa27.57■■■□□ 2
LINC02407-202ENST00000553247 MSH5O43196 834 aa26.47■■□□□ 1.83
LINC02407-202ENST00000553247 PIAS4Q8N2W9 510 aaPredicted RBP25.39■■□□□ 1.66
LINC02407-202ENST00000553247 PPP6R1Q9UPN7 881 aa24.53■■□□□ 1.52
LINC02407-202ENST00000553247 ADRA2BP18089 450 aa24.37■■□□□ 1.49
LINC02407-202ENST00000553247 PLPPR3Q6T4P5 718 aa23.98■■□□□ 1.43
LINC02407-202ENST00000553247 CACNB1Q02641 598 aaPredicted RBP23.7■■□□□ 1.38
LINC02407-202ENST00000553247 DMRT2Q9Y5R5 561 aa23.04■■□□□ 1.28
LINC02407-202ENST00000553247 MAPK8IP2Q13387 824 aaPredicted RBP22.87■■□□□ 1.25
LINC02407-202ENST00000553247 RNF39Q9H2S5 420 aa22.4■■□□□ 1.18
LINC02407-202ENST00000553247 SCAF1Q9H7N4 1312 aaKnown RBP22.39■■□□□ 1.18
LINC02407-202ENST00000553247 DCAF8L1A6NGE4 600 aa22.23■■□□□ 1.15
LINC02407-202ENST00000553247 POTEHQ6S545 545 aa22.05■■□□□ 1.12
LINC02407-202ENST00000553247 C1QBPQ07021 282 aaKnown RBP22.02■■□□□ 1.12
LINC02407-202ENST00000553247 HOXD11P31277 338 aaPredicted RBP21.58■■□□□ 1.05
LINC02407-202ENST00000553247 DNAJC5BQ9UF47 199 aa21.18■□□□□ 0.98
LINC02407-202ENST00000553247 RNF216Q9NWF9 866 aaPredicted RBP21■□□□□ 0.95
LINC02407-202ENST00000553247 PPP4R3CPQ6ZMV5 832 aa20.79■□□□□ 0.92
LINC02407-202ENST00000553247 CNKSR2Q8WXI2 1034 aa20.79■□□□□ 0.92
LINC02407-202ENST00000553247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.6■□□□□ 0.89
LINC02407-202ENST00000553247 DSG3P32926 999 aa20.44■□□□□ 0.86
LINC02407-202ENST00000553247 CAPN15O75808 1086 aa20.22■□□□□ 0.83
LINC02407-202ENST00000553247 SPINK5Q9NQ38 1064 aaPredicted RBP20.12■□□□□ 0.81
LINC02407-202ENST00000553247 U3KPZ7 1027 aaPredicted RBP19.93■□□□□ 0.78
LINC02407-202ENST00000553247 SP7Q8TDD2 431 aaPredicted RBP19.91■□□□□ 0.78
LINC02407-202ENST00000553247 NISCHQ9Y2I1 1504 aa19.86■□□□□ 0.77
LINC02407-202ENST00000553247 CHRDL2Q6WN34 429 aa19.77■□□□□ 0.76
LINC02407-202ENST00000553247 RBM42Q9BTD8 480 aaKnown RBP19.59■□□□□ 0.73
LINC02407-202ENST00000553247 ABCB7O75027 752 aa19.57■□□□□ 0.72
LINC02407-202ENST00000553247 NCBP3Q53F19 620 aaKnown RBP19.56■□□□□ 0.72
LINC02407-202ENST00000553247 TRHP20396 242 aaPredicted RBP19.5■□□□□ 0.71
LINC02407-202ENST00000553247 ZNF219Q9P2Y4 722 aaPredicted RBP19.41■□□□□ 0.7
LINC02407-202ENST00000553247 APLP2Q06481 763 aa19.29■□□□□ 0.68
LINC02407-202ENST00000553247 NPM3O75607 178 aaKnown RBP19.21■□□□□ 0.67
LINC02407-202ENST00000553247 HAX1O00165 279 aa19.08■□□□□ 0.64
LINC02407-202ENST00000553247 PIP4P2Q8N4L2 257 aa18.94■□□□□ 0.62
LINC02407-202ENST00000553247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.88■□□□□ 0.61
LINC02407-202ENST00000553247 HNRNPUL2Q1KMD3 747 aaKnown RBP18.88■□□□□ 0.61
LINC02407-202ENST00000553247 PLSCR2Q9NRY7 297 aa18.84■□□□□ 0.61
LINC02407-202ENST00000553247 AKT1S1Q96B36 256 aa18.79■□□□□ 0.6
LINC02407-202ENST00000553247 SLC4A2P04920 1241 aa18.75■□□□□ 0.59
LINC02407-202ENST00000553247 SAMD1Q6SPF0 538 aaPredicted RBP18.68■□□□□ 0.58
LINC02407-202ENST00000553247 LHX8Q68G74 356 aa18.67■□□□□ 0.58
LINC02407-202ENST00000553247 EVX2Q03828 476 aa18.65■□□□□ 0.58
LINC02407-202ENST00000553247 POLA2Q14181 598 aa18.6■□□□□ 0.57
LINC02407-202ENST00000553247 REM2Q8IYK8 340 aaPredicted RBP18.59■□□□□ 0.57
LINC02407-202ENST00000553247 FXR2P51116 673 aaKnown RBP eCLIP18.58■□□□□ 0.56
LINC02407-202ENST00000553247 PITPNM1O00562 1244 aa18.4■□□□□ 0.54
LINC02407-202ENST00000553247 GABBR2O75899 941 aa18.18■□□□□ 0.5
LINC02407-202ENST00000553247 ZBTB12Q9Y330 459 aaPredicted RBP18.13■□□□□ 0.49
LINC02407-202ENST00000553247 C19orf67A6NJJ6 358 aa18.04■□□□□ 0.48
LINC02407-202ENST00000553247 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
LINC02407-202ENST00000553247 PRKAR2AP13861 404 aaKnown RBP17.93■□□□□ 0.46
LINC02407-202ENST00000553247 MYCNP04198 464 aaPredicted RBP17.82■□□□□ 0.44
LINC02407-202ENST00000553247 POTEIP0CG38 1075 aa17.75■□□□□ 0.43
LINC02407-202ENST00000553247 POTEMA6NI47 508 aa17.67■□□□□ 0.42
LINC02407-202ENST00000553247 CCDC180Q9P1Z9 1646 aa17.66■□□□□ 0.42
LINC02407-202ENST00000553247 CLEC11AQ9Y240 323 aa17.58■□□□□ 0.4
LINC02407-202ENST00000553247 POTEGQ6S5H5 508 aa17.55■□□□□ 0.4
LINC02407-202ENST00000553247 SPDYE1Q8NFV5 336 aaPredicted RBP17.52■□□□□ 0.4
LINC02407-202ENST00000553247 PCDH10Q9P2E7 1040 aa17.51■□□□□ 0.39
LINC02407-202ENST00000553247 ATF5Q9Y2D1 282 aaPredicted RBP17.5■□□□□ 0.39
LINC02407-202ENST00000553247 ABCC9O60706 1549 aa17.44■□□□□ 0.38
LINC02407-202ENST00000553247 SPDYE2BA6NHP3 402 aa17.42■□□□□ 0.38
LINC02407-202ENST00000553247 SPDYE6P0CI01 402 aa17.42■□□□□ 0.38
LINC02407-202ENST00000553247 SPDYE2Q495Y8 402 aa17.42■□□□□ 0.38
LINC02407-202ENST00000553247 OTUD5Q96G74 571 aa17.41■□□□□ 0.38
LINC02407-202ENST00000553247 KCNA4P22459 653 aa17.4■□□□□ 0.38
LINC02407-202ENST00000553247 CLCN6P51797 869 aa17.4■□□□□ 0.38
LINC02407-202ENST00000553247 DCBLD2Q96PD2 775 aa17.39■□□□□ 0.37
LINC02407-202ENST00000553247 CHADLQ6NUI6 762 aa17.37■□□□□ 0.37
LINC02407-202ENST00000553247 CD44P16070 742 aaKnown RBP17.27■□□□□ 0.36
LINC02407-202ENST00000553247 POTEB2H3BUK9 544 aa17.13■□□□□ 0.33
LINC02407-202ENST00000553247 PRR29P0C7W0 189 aa17.06■□□□□ 0.32
LINC02407-202ENST00000553247 FBLN2P98095 1184 aa17■□□□□ 0.31
LINC02407-202ENST00000553247 SSUH2Q9Y2M2 353 aa16.97■□□□□ 0.31
LINC02407-202ENST00000553247 FARP1Q9Y4F1 1045 aaPredicted RBP16.97■□□□□ 0.31
LINC02407-202ENST00000553247 ZNF692Q9BU19 519 aaPredicted RBP16.96■□□□□ 0.31
LINC02407-202ENST00000553247 ZNF579Q8NAF0 562 aaKnown RBP16.92■□□□□ 0.3
LINC02407-202ENST00000553247 LCE2DQ5TA82 110 aaPredicted RBP16.82■□□□□ 0.28
LINC02407-202ENST00000553247 GALR2O43603 387 aaPredicted RBP16.81■□□□□ 0.28
LINC02407-202ENST00000553247 ZRANB1Q9UGI0 708 aa16.79■□□□□ 0.28
LINC02407-202ENST00000553247 FAM163AQ96GL9 167 aaPredicted RBP16.78■□□□□ 0.28
LINC02407-202ENST00000553247 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
LINC02407-202ENST00000553247 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
LINC02407-202ENST00000553247 NACADO15069 1562 aa16.71■□□□□ 0.27
LINC02407-202ENST00000553247 MAMSTRQ6ZN01 415 aa16.67■□□□□ 0.26
LINC02407-202ENST00000553247 DCAF8L2P0C7V8 631 aa16.65■□□□□ 0.26
LINC02407-202ENST00000553247 PABPN1Q86U42 306 aaKnown RBP eCLIP16.64■□□□□ 0.25
LINC02407-202ENST00000553247 PELP1Q8IZL8 1130 aaKnown RBP16.62■□□□□ 0.25
LINC02407-202ENST00000553247 MYO15BQ96JP2 1530 aa16.61■□□□□ 0.25
LINC02407-202ENST00000553247 POTEJP0CG39 1038 aa16.6■□□□□ 0.25
LINC02407-202ENST00000553247 MKRN4PQ13434 485 aaPredicted RBP16.6■□□□□ 0.25
LINC02407-202ENST00000553247 CDAN1Q8IWY9 1227 aa16.59■□□□□ 0.25
LINC02407-202ENST00000553247 METRNQ9UJH8 293 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms