RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 ADGBQ8N7X0 1667 aa14.2□□□□□ -0.14
CDK4-211ENST00000552254 PTPN23Q9H3S7 1636 aa14.2□□□□□ -0.14
CDK4-211ENST00000552254 PLXNC1O60486 1568 aa14.2□□□□□ -0.14
CDK4-211ENST00000552254 ARHGEF5Q12774 1597 aa14.2□□□□□ -0.14
CDK4-211ENST00000552254 CLTCQ00610 1675 aaKnown RBP14.2□□□□□ -0.14
CDK4-211ENST00000552254 PKD2Q13563 968 aa14.19□□□□□ -0.14
CDK4-211ENST00000552254 PPP6R1Q9UPN7 881 aa14.19□□□□□ -0.14
CDK4-211ENST00000552254 CEP170BQ9Y4F5 1589 aaPredicted RBP14.18□□□□□ -0.14
CDK4-211ENST00000552254 FGD6Q6ZV73 1430 aa14.18□□□□□ -0.14
CDK4-211ENST00000552254 TOM1O60784 492 aa14.18□□□□□ -0.14
CDK4-211ENST00000552254 GGT6Q6P531 493 aa14.18□□□□□ -0.14
CDK4-211ENST00000552254 PPARGC1BQ86YN6 1023 aaKnown RBP14.18□□□□□ -0.14
CDK4-211ENST00000552254 PLA2R1Q13018 1463 aa14.18□□□□□ -0.14
CDK4-211ENST00000552254 CCDC141Q6ZP82 1450 aa14.17□□□□□ -0.14
CDK4-211ENST00000552254 RSPH4AQ5TD94 716 aa14.16□□□□□ -0.14
CDK4-211ENST00000552254 TCOF1Q13428 1488 aaKnown RBP14.16□□□□□ -0.14
CDK4-211ENST00000552254 SENP3Q9H4L4 574 aaPredicted RBP14.15□□□□□ -0.14
CDK4-211ENST00000552254 ZMYM3Q14202 1370 aa14.14□□□□□ -0.15
CDK4-211ENST00000552254 POLR1AO95602 1720 aaPredicted RBP14.14□□□□□ -0.15
CDK4-211ENST00000552254 CPS1P31327 1500 aa14.14□□□□□ -0.15
CDK4-211ENST00000552254 RTEL1-TNFRSF6BF6WH68 1400 aa14.14□□□□□ -0.15
CDK4-211ENST00000552254 CROCC2H7BZ55 1655 aa14.14□□□□□ -0.15
CDK4-211ENST00000552254 DNMT1P26358 1616 aaKnown RBP14.12□□□□□ -0.15
CDK4-211ENST00000552254 MAST1Q9Y2H9 1570 aa14.12□□□□□ -0.15
CDK4-211ENST00000552254 DHX29Q7Z478 1369 aaKnown RBP14.11□□□□□ -0.15
CDK4-211ENST00000552254 SETD1AO15047 1707 aaKnown RBP14.11□□□□□ -0.15
CDK4-211ENST00000552254 KIF3BO15066 747 aa14.11□□□□□ -0.15
CDK4-211ENST00000552254 TSPY4P0CV99 314 aa14.1□□□□□ -0.15
CDK4-211ENST00000552254 TSPY10P0CW01 314 aa14.1□□□□□ -0.15
CDK4-211ENST00000552254 ABCC5O15440 1437 aa14.09□□□□□ -0.15
CDK4-211ENST00000552254 PTPRKQ15262 1439 aa14.09□□□□□ -0.15
CDK4-211ENST00000552254 FAM50AQ14320 339 aaKnown RBP14.08□□□□□ -0.16
CDK4-211ENST00000552254 DAPK1P53355 1430 aa14.07□□□□□ -0.16
CDK4-211ENST00000552254 SHANK2Q9UPX8 1470 aa14.06□□□□□ -0.16
CDK4-211ENST00000552254 RGS17Q9UGC6 210 aaPredicted RBP14.06□□□□□ -0.16
CDK4-211ENST00000552254 A2ML1A8K2U0 1454 aa14.06□□□□□ -0.16
CDK4-211ENST00000552254 FBXO31Q5XUX0 539 aaPredicted RBP14.04□□□□□ -0.16
CDK4-211ENST00000552254 KDM5DQ9BY66 1539 aa14.03□□□□□ -0.16
CDK4-211ENST00000552254 NEURL4Q96JN8 1562 aa14.02□□□□□ -0.16
CDK4-211ENST00000552254 RRBP1Q9P2E9 1410 aaKnown RBP14.02□□□□□ -0.16
CDK4-211ENST00000552254 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.02□□□□□ -0.17
CDK4-211ENST00000552254 WASHC2CQ9Y4E1 1318 aa14.02□□□□□ -0.17
CDK4-211ENST00000552254 CHIC2Q9UKJ5 165 aa14.01□□□□□ -0.17
CDK4-211ENST00000552254 RNF17Q9BXT8 1623 aaKnown RBP14.01□□□□□ -0.17
CDK4-211ENST00000552254 EIF2AK4Q9P2K8 1649 aaKnown RBP14□□□□□ -0.17
CDK4-211ENST00000552254 DUOX2Q9NRD8 1548 aa14□□□□□ -0.17
CDK4-211ENST00000552254 ADGRL2O95490 1459 aa13.99□□□□□ -0.17
CDK4-211ENST00000552254 CEP152O94986 1710 aa13.99□□□□□ -0.17
CDK4-211ENST00000552254 PZPP20742 1482 aa13.99□□□□□ -0.17
CDK4-211ENST00000552254 ANKRD30AQ9BXX3 1397 aa13.98□□□□□ -0.17
CDK4-211ENST00000552254 KIF15Q9NS87 1388 aa13.98□□□□□ -0.17
CDK4-211ENST00000552254 CFAP65Q6ZU64 1925 aaKnown RBP13.98□□□□□ -0.17
CDK4-211ENST00000552254 MROH1Q8NDA8 1641 aa13.98□□□□□ -0.17
CDK4-211ENST00000552254 VWDEQ8N2E2 1590 aa13.98□□□□□ -0.17
CDK4-211ENST00000552254 RRP7BPQ9NSQ0 103 aa13.98□□□□□ -0.17
CDK4-211ENST00000552254 TNRQ92752 1358 aa13.97□□□□□ -0.17
CDK4-211ENST00000552254 ANKLE2Q86XL3 938 aa13.97□□□□□ -0.17
CDK4-211ENST00000552254 SYNMO15061 1565 aa13.96□□□□□ -0.17
CDK4-211ENST00000552254 ABCC3O15438 1527 aa13.96□□□□□ -0.17
CDK4-211ENST00000552254 IQGAP1P46940 1657 aa13.96□□□□□ -0.17
CDK4-211ENST00000552254 FAM135AQ9P2D6 1515 aa13.95□□□□□ -0.18
CDK4-211ENST00000552254 ZC3H13Q5T200 1668 aaKnown RBP13.95□□□□□ -0.18
CDK4-211ENST00000552254 ALKQ9UM73 1620 aa13.95□□□□□ -0.18
CDK4-211ENST00000552254 ITGAEP38570 1179 aa13.95□□□□□ -0.18
CDK4-211ENST00000552254 NPHP4O75161 1426 aaPredicted RBP13.95□□□□□ -0.18
CDK4-211ENST00000552254 ERBINQ96RT1 1412 aa13.94□□□□□ -0.18
CDK4-211ENST00000552254 ROCK1Q13464 1354 aa13.93□□□□□ -0.18
CDK4-211ENST00000552254 DEPDC5O75140 1603 aa13.93□□□□□ -0.18
CDK4-211ENST00000552254 POTEAQ6S8J7 498 aa13.92□□□□□ -0.18
CDK4-211ENST00000552254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDK4-211ENST00000552254 UGGT1Q9NYU2 1555 aa13.92□□□□□ -0.18
CDK4-211ENST00000552254 THEMISQ8N1K5 641 aaPredicted RBP13.91□□□□□ -0.18
CDK4-211ENST00000552254 LRRC7Q96NW7 1537 aa13.9□□□□□ -0.18
CDK4-211ENST00000552254 STRCP1A6NGW2 1772 aa13.9□□□□□ -0.18
CDK4-211ENST00000552254 PRDM15P57071 1507 aaPredicted RBP13.9□□□□□ -0.19
CDK4-211ENST00000552254 ERVK-7P63135 1459 aa13.89□□□□□ -0.19
CDK4-211ENST00000552254 UPF1Q92900 1129 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDK4-211ENST00000552254 ANKRD50Q9ULJ7 1429 aa13.89□□□□□ -0.19
CDK4-211ENST00000552254 NLRP1Q9C000 1473 aa13.88□□□□□ -0.19
CDK4-211ENST00000552254 MED14O60244 1454 aa13.87□□□□□ -0.19
CDK4-211ENST00000552254 IFFO2Q5TF58 517 aa13.87□□□□□ -0.19
CDK4-211ENST00000552254 GCC2Q8IWJ2 1684 aa13.87□□□□□ -0.19
CDK4-211ENST00000552254 UBR1Q8IWV7 1749 aa13.85□□□□□ -0.19
CDK4-211ENST00000552254 UNC13BO14795 1591 aa13.84□□□□□ -0.19
CDK4-211ENST00000552254 KANK1Q14678 1352 aa13.83□□□□□ -0.2
CDK4-211ENST00000552254 NAIPQ13075 1403 aa13.82□□□□□ -0.2
CDK4-211ENST00000552254 PIK3C2BO00750 1634 aa13.82□□□□□ -0.2
CDK4-211ENST00000552254 ARHGAP31Q2M1Z3 1444 aa13.81□□□□□ -0.2
CDK4-211ENST00000552254 HFM1A2PYH4 1435 aa13.81□□□□□ -0.2
CDK4-211ENST00000552254 LMTK2Q8IWU2 1503 aa13.8□□□□□ -0.2
CDK4-211ENST00000552254 IQGAP3Q86VI3 1631 aa13.79□□□□□ -0.2
CDK4-211ENST00000552254 XIRP1Q702N8 1843 aaKnown RBP13.79□□□□□ -0.2
CDK4-211ENST00000552254 TET3O43151 1660 aa13.79□□□□□ -0.2
CDK4-211ENST00000552254 ROBO1Q9Y6N7 1651 aa13.79□□□□□ -0.2
CDK4-211ENST00000552254 EFCAB6Q5THR3 1501 aa13.78□□□□□ -0.2
CDK4-211ENST00000552254 LTKP29376 864 aa13.77□□□□□ -0.21
CDK4-211ENST00000552254 SCAF11Q99590 1463 aaKnown RBP13.76□□□□□ -0.21
CDK4-211ENST00000552254 IDI1Q13907 227 aa13.76□□□□□ -0.21
CDK4-211ENST00000552254 FAM135BQ49AJ0 1406 aa13.75□□□□□ -0.21
CDK4-211ENST00000552254 NUP155O75694 1391 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms