RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 CCDC141Q6ZP82 1450 aa22.78■■□□□ 1.24
CHMP1A-210ENST00000551981 POLR1AO95602 1720 aaPredicted RBP22.77■■□□□ 1.23
CHMP1A-210ENST00000551981 KDM5DQ9BY66 1539 aa22.76■■□□□ 1.23
CHMP1A-210ENST00000551981 RSPH4AQ5TD94 716 aa22.75■■□□□ 1.23
CHMP1A-210ENST00000551981 TNRQ92752 1358 aa22.75■■□□□ 1.23
CHMP1A-210ENST00000551981 CAMSAP2Q08AD1 1489 aa22.74■■□□□ 1.23
CHMP1A-210ENST00000551981 KIF3BO15066 747 aa22.74■■□□□ 1.23
CHMP1A-210ENST00000551981 PZPP20742 1482 aa22.73■■□□□ 1.23
CHMP1A-210ENST00000551981 NCOA2Q15596 1464 aa22.73■■□□□ 1.23
CHMP1A-210ENST00000551981 WASHC2CQ9Y4E1 1318 aa22.71■■□□□ 1.23
CHMP1A-210ENST00000551981 CPS1P31327 1500 aa22.69■■□□□ 1.22
CHMP1A-210ENST00000551981 FBXO31Q5XUX0 539 aaPredicted RBP22.69■■□□□ 1.22
CHMP1A-210ENST00000551981 ARHGEF5Q12774 1597 aa22.68■■□□□ 1.22
CHMP1A-210ENST00000551981 NEURL4Q96JN8 1562 aa22.68■■□□□ 1.22
CHMP1A-210ENST00000551981 NLRP1Q9C000 1473 aa22.66■■□□□ 1.22
CHMP1A-210ENST00000551981 TSPY4P0CV99 314 aa22.65■■□□□ 1.22
CHMP1A-210ENST00000551981 TSPY10P0CW01 314 aa22.65■■□□□ 1.22
CHMP1A-210ENST00000551981 SHANK2Q9UPX8 1470 aa22.65■■□□□ 1.22
CHMP1A-210ENST00000551981 ANKLE2Q86XL3 938 aa22.64■■□□□ 1.21
CHMP1A-210ENST00000551981 THEMISQ8N1K5 641 aaPredicted RBP22.64■■□□□ 1.21
CHMP1A-210ENST00000551981 MIA2Q96PC5 1412 aa22.64■■□□□ 1.21
CHMP1A-210ENST00000551981 UGGT1Q9NYU2 1555 aa22.63■■□□□ 1.21
CHMP1A-210ENST00000551981 SCAF1Q9H7N4 1312 aaKnown RBP22.62■■□□□ 1.21
CHMP1A-210ENST00000551981 TOM1O60784 492 aa22.62■■□□□ 1.21
CHMP1A-210ENST00000551981 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.62■■□□□ 1.213e-6■■■■□ 26.4
CHMP1A-210ENST00000551981 DEPDC5O75140 1603 aa22.6■■□□□ 1.21
CHMP1A-210ENST00000551981 ZC3H13Q5T200 1668 aaKnown RBP22.6■■□□□ 1.21
CHMP1A-210ENST00000551981 RNF17Q9BXT8 1623 aaKnown RBP22.6■■□□□ 1.21
CHMP1A-210ENST00000551981 PIP4K2BP78356 416 aa22.59■■□□□ 1.21
CHMP1A-210ENST00000551981 MED14O60244 1454 aa22.58■■□□□ 1.2
CHMP1A-210ENST00000551981 VWDEQ8N2E2 1590 aa22.58■■□□□ 1.2
CHMP1A-210ENST00000551981 NPHP4O75161 1426 aaPredicted RBP22.57■■□□□ 1.2
CHMP1A-210ENST00000551981 MAST1Q9Y2H9 1570 aa22.57■■□□□ 1.2
CHMP1A-210ENST00000551981 EIF2AK4Q9P2K8 1649 aaKnown RBP22.57■■□□□ 1.2
CHMP1A-210ENST00000551981 LRRC9Q6ZRR7 1453 aa22.56■■□□□ 1.2
CHMP1A-210ENST00000551981 HSPA1LP34931 641 aa22.56■■□□□ 1.2
CHMP1A-210ENST00000551981 ABCC3O15438 1527 aa22.56■■□□□ 1.2
CHMP1A-210ENST00000551981 IQGAP1P46940 1657 aa22.55■■□□□ 1.2
CHMP1A-210ENST00000551981 MED1Q15648 1581 aaPredicted RBP22.52■■□□□ 1.2
CHMP1A-210ENST00000551981 VPS8Q8N3P4 1428 aa22.52■■□□□ 1.2
CHMP1A-210ENST00000551981 ERVK-7P63135 1459 aa22.5■■□□□ 1.19
CHMP1A-210ENST00000551981 SYNMO15061 1565 aa22.47■■□□□ 1.19
CHMP1A-210ENST00000551981 MROH1Q8NDA8 1641 aa22.47■■□□□ 1.19
CHMP1A-210ENST00000551981 CEP152O94986 1710 aa22.47■■□□□ 1.19
CHMP1A-210ENST00000551981 MYOM3Q5VTT5 1437 aa22.46■■□□□ 1.19
CHMP1A-210ENST00000551981 MAP3K1Q13233 1512 aa22.46■■□□□ 1.19
CHMP1A-210ENST00000551981 DUOX2Q9NRD8 1548 aa22.46■■□□□ 1.19
CHMP1A-210ENST00000551981 UBR1Q8IWV7 1749 aa22.45■■□□□ 1.18
CHMP1A-210ENST00000551981 CFAP65Q6ZU64 1925 aaKnown RBP22.45■■□□□ 1.18
CHMP1A-210ENST00000551981 STRCP1A6NGW2 1772 aa22.44■■□□□ 1.18
CHMP1A-210ENST00000551981 ALKQ9UM73 1620 aa22.43■■□□□ 1.18
CHMP1A-210ENST00000551981 LRRC7Q96NW7 1537 aa22.43■■□□□ 1.18
CHMP1A-210ENST00000551981 KANK4Q5T7N3 995 aaPredicted RBP22.4■■□□□ 1.18
CHMP1A-210ENST00000551981 PHF23Q9BUL5 403 aaPredicted RBP22.4■■□□□ 1.18
CHMP1A-210ENST00000551981 SCAF11Q99590 1463 aaKnown RBP22.4■■□□□ 1.18
CHMP1A-210ENST00000551981 PRDM15P57071 1507 aaPredicted RBP22.39■■□□□ 1.17
CHMP1A-210ENST00000551981 CROCC2H7BZ55 1655 aa22.38■■□□□ 1.17
CHMP1A-210ENST00000551981 KIF15Q9NS87 1388 aa22.38■■□□□ 1.17
CHMP1A-210ENST00000551981 ARHGAP31Q2M1Z3 1444 aa22.37■■□□□ 1.17
CHMP1A-210ENST00000551981 ERBINQ96RT1 1412 aa22.37■■□□□ 1.17
CHMP1A-210ENST00000551981 SLIT1O75093 1534 aa22.36■■□□□ 1.17
CHMP1A-210ENST00000551981 ARHGAP23Q9P227 1491 aa22.34■■□□□ 1.17
CHMP1A-210ENST00000551981 TXNDC2Q86VQ3 553 aa22.34■■□□□ 1.17
CHMP1A-210ENST00000551981 LOC105371045A0A1W2PR82 267 aa22.33■■□□□ 1.17
CHMP1A-210ENST00000551981 EID1Q9Y6B2 187 aa22.33■■□□□ 1.17
CHMP1A-210ENST00000551981 SENP3Q9H4L4 574 aaPredicted RBP22.32■■□□□ 1.16
CHMP1A-210ENST00000551981 PTPN23Q9H3S7 1636 aa22.31■■□□□ 1.16
CHMP1A-210ENST00000551981 KANK1Q14678 1352 aa22.31■■□□□ 1.16
CHMP1A-210ENST00000551981 LTKP29376 864 aa22.31■■□□□ 1.16
CHMP1A-210ENST00000551981 RRP7BPQ9NSQ0 103 aa22.31■■□□□ 1.16
CHMP1A-210ENST00000551981 ABCC5O15440 1437 aa22.31■■□□□ 1.16
CHMP1A-210ENST00000551981 PIK3C2BO00750 1634 aa22.3■■□□□ 1.16
CHMP1A-210ENST00000551981 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.29■■□□□ 1.162e-6■■□□□ 11.4
CHMP1A-210ENST00000551981 APLP2Q06481 763 aa22.28■■□□□ 1.16
CHMP1A-210ENST00000551981 STAG3Q9UJ98 1225 aa22.28■■□□□ 1.16
CHMP1A-210ENST00000551981 KDM5AP29375 1690 aaKnown RBP22.27■■□□□ 1.16
CHMP1A-210ENST00000551981 XIRP1Q702N8 1843 aaKnown RBP22.27■■□□□ 1.16
CHMP1A-210ENST00000551981 DAPK1P53355 1430 aa22.27■■□□□ 1.16
CHMP1A-210ENST00000551981 TMEM2Q9UHN6 1383 aa22.26■■□□□ 1.15
CHMP1A-210ENST00000551981 EFCAB6Q5THR3 1501 aa22.24■■□□□ 1.15
CHMP1A-210ENST00000551981 LMTK2Q8IWU2 1503 aa22.23■■□□□ 1.15
CHMP1A-210ENST00000551981 ANKRD30AQ9BXX3 1397 aa22.23■■□□□ 1.15
CHMP1A-210ENST00000551981 FGD6Q6ZV73 1430 aa22.22■■□□□ 1.15
CHMP1A-210ENST00000551981 IDI1Q13907 227 aa22.18■■□□□ 1.14
CHMP1A-210ENST00000551981 FAM135BQ49AJ0 1406 aa22.17■■□□□ 1.14
CHMP1A-210ENST00000551981 TMEM94Q12767 1356 aa22.17■■□□□ 1.14
CHMP1A-210ENST00000551981 CHIC2Q9UKJ5 165 aa22.17■■□□□ 1.14
CHMP1A-210ENST00000551981 KCNA6P17658 529 aa22.16■■□□□ 1.14
CHMP1A-210ENST00000551981 ADGRB3O60242 1522 aa22.16■■□□□ 1.14
CHMP1A-210ENST00000551981 TET3O43151 1660 aa22.14■■□□□ 1.14
CHMP1A-210ENST00000551981 NOS1P29475 1434 aa22.14■■□□□ 1.13
CHMP1A-210ENST00000551981 SLC26A8Q96RN1 970 aa22.13■■□□□ 1.13
CHMP1A-210ENST00000551981 PROSER2Q86WR7 435 aaPredicted RBP22.12■■□□□ 1.13
CHMP1A-210ENST00000551981 SLC52A1Q9NWF4 448 aa22.12■■□□□ 1.13
CHMP1A-210ENST00000551981 ROBO1Q9Y6N7 1651 aa22.11■■□□□ 1.13
CHMP1A-210ENST00000551981 NKTRP30414 1462 aaKnown RBP22.11■■□□□ 1.13
CHMP1A-210ENST00000551981 ADGRL2O95490 1459 aa22.1■■□□□ 1.13
CHMP1A-210ENST00000551981 NWD1Q149M9 1564 aa22.1■■□□□ 1.13
CHMP1A-210ENST00000551981 BCANQ96GW7 911 aa22.1■■□□□ 1.13
CHMP1A-210ENST00000551981 RPRD2Q5VT52 1461 aaKnown RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms