RNA–Protein interactions for RNA: ENST00000549455.1

ATXN2-218, Transcript of ataxin 2, humanhuman

TSL 4

Gene ATXN2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-218ENST00000549455 POLR1AO95602 1720 aaPredicted RBP23.16■■□□□ 1.3
ATXN2-218ENST00000549455 ARHGEF5Q12774 1597 aa23.16■■□□□ 1.3
ATXN2-218ENST00000549455 SPATA31D1Q6ZQQ2 1576 aa23.15■■□□□ 1.3
ATXN2-218ENST00000549455 FAM135AQ9P2D6 1515 aa23.13■■□□□ 1.29
ATXN2-218ENST00000549455 PZPP20742 1482 aa23.12■■□□□ 1.29
ATXN2-218ENST00000549455 RSPH4AQ5TD94 716 aa23.12■■□□□ 1.29
ATXN2-218ENST00000549455 TNRQ92752 1358 aa23.12■■□□□ 1.29
ATXN2-218ENST00000549455 VPS8Q8N3P4 1428 aa23.1■■□□□ 1.29
ATXN2-218ENST00000549455 FBXO31Q5XUX0 539 aaPredicted RBP23.1■■□□□ 1.29
ATXN2-218ENST00000549455 LRRC9Q6ZRR7 1453 aa23.1■■□□□ 1.29
ATXN2-218ENST00000549455 WASHC2CQ9Y4E1 1318 aa23.08■■□□□ 1.29
ATXN2-218ENST00000549455 NEURL4Q96JN8 1562 aa23.07■■□□□ 1.28
ATXN2-218ENST00000549455 UBAP1LF5GYI3 381 aa23.07■■□□□ 1.28
ATXN2-218ENST00000549455 TSPY4P0CV99 314 aa23.07■■□□□ 1.28
ATXN2-218ENST00000549455 TSPY10P0CW01 314 aa23.07■■□□□ 1.28
ATXN2-218ENST00000549455 RNF17Q9BXT8 1623 aaKnown RBP23.05■■□□□ 1.28
ATXN2-218ENST00000549455 ILDR2Q71H61 639 aa23.05■■□□□ 1.28
ATXN2-218ENST00000549455 MAST1Q9Y2H9 1570 aa23.05■■□□□ 1.28
ATXN2-218ENST00000549455 ZC3H13Q5T200 1668 aaKnown RBP23.03■■□□□ 1.28
ATXN2-218ENST00000549455 SOCS7O14512 581 aa23.03■■□□□ 1.28
ATXN2-218ENST00000549455 LOC105371045A0A1W2PR82 267 aa23.02■■□□□ 1.28
ATXN2-218ENST00000549455 EIF2AK4Q9P2K8 1649 aaKnown RBP23.01■■□□□ 1.27
ATXN2-218ENST00000549455 NLRP1Q9C000 1473 aa23.01■■□□□ 1.27
ATXN2-218ENST00000549455 UGGT1Q9NYU2 1555 aa23.01■■□□□ 1.27
ATXN2-218ENST00000549455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23■■□□□ 1.276e-7■■■□□ 17.1
ATXN2-218ENST00000549455 MIA2Q96PC5 1412 aa22.99■■□□□ 1.27
ATXN2-218ENST00000549455 CEP152O94986 1710 aa22.99■■□□□ 1.27
ATXN2-218ENST00000549455 ABCC3O15438 1527 aa22.99■■□□□ 1.27
ATXN2-218ENST00000549455 CPS1P31327 1500 aa22.98■■□□□ 1.27
ATXN2-218ENST00000549455 MAP3K1Q13233 1512 aa22.98■■□□□ 1.27
ATXN2-218ENST00000549455 KANK4Q5T7N3 995 aaPredicted RBP22.97■■□□□ 1.27
ATXN2-218ENST00000549455 CFAP65Q6ZU64 1925 aaKnown RBP22.97■■□□□ 1.27
ATXN2-218ENST00000549455 MYOM3Q5VTT5 1437 aa22.97■■□□□ 1.27
ATXN2-218ENST00000549455 SHANK2Q9UPX8 1470 aa22.96■■□□□ 1.27
ATXN2-218ENST00000549455 MROH1Q8NDA8 1641 aa22.96■■□□□ 1.27
ATXN2-218ENST00000549455 DEPDC5O75140 1603 aa22.95■■□□□ 1.26
ATXN2-218ENST00000549455 ANKLE2Q86XL3 938 aa22.95■■□□□ 1.26
ATXN2-218ENST00000549455 THEMISQ8N1K5 641 aaPredicted RBP22.95■■□□□ 1.26
ATXN2-218ENST00000549455 IQGAP1P46940 1657 aa22.94■■□□□ 1.26
ATXN2-218ENST00000549455 CROCC2H7BZ55 1655 aa22.93■■□□□ 1.26
ATXN2-218ENST00000549455 VWDEQ8N2E2 1590 aa22.93■■□□□ 1.26
ATXN2-218ENST00000549455 SCAF1Q9H7N4 1312 aaKnown RBP22.93■■□□□ 1.26
ATXN2-218ENST00000549455 NPHP4O75161 1426 aaPredicted RBP22.92■■□□□ 1.26
ATXN2-218ENST00000549455 ERVK-7P63135 1459 aa22.92■■□□□ 1.26
ATXN2-218ENST00000549455 DUOX2Q9NRD8 1548 aa22.91■■□□□ 1.26
ATXN2-218ENST00000549455 MED14O60244 1454 aa22.9■■□□□ 1.26
ATXN2-218ENST00000549455 UBR1Q8IWV7 1749 aa22.88■■□□□ 1.25
ATXN2-218ENST00000549455 PIP4K2BP78356 416 aa22.88■■□□□ 1.25
ATXN2-218ENST00000549455 PTPN23Q9H3S7 1636 aa22.88■■□□□ 1.25
ATXN2-218ENST00000549455 TOM1O60784 492 aa22.86■■□□□ 1.25
ATXN2-218ENST00000549455 STRCP1A6NGW2 1772 aa22.86■■□□□ 1.25
ATXN2-218ENST00000549455 PRDM15P57071 1507 aaPredicted RBP22.84■■□□□ 1.25
ATXN2-218ENST00000549455 KIF15Q9NS87 1388 aa22.84■■□□□ 1.25
ATXN2-218ENST00000549455 HSPA1LP34931 641 aa22.82■■□□□ 1.24
ATXN2-218ENST00000549455 APLP2Q06481 763 aa22.81■■□□□ 1.24
ATXN2-218ENST00000549455 ABCC5O15440 1437 aa22.81■■□□□ 1.24
ATXN2-218ENST00000549455 ERBINQ96RT1 1412 aa22.81■■□□□ 1.24
ATXN2-218ENST00000549455 SYNMO15061 1565 aa22.8■■□□□ 1.24
ATXN2-218ENST00000549455 RRP7BPQ9NSQ0 103 aa22.79■■□□□ 1.24
ATXN2-218ENST00000549455 MED1Q15648 1581 aaPredicted RBP22.79■■□□□ 1.24
ATXN2-218ENST00000549455 DAPK1P53355 1430 aa22.78■■□□□ 1.24
ATXN2-218ENST00000549455 ALKQ9UM73 1620 aa22.78■■□□□ 1.24
ATXN2-218ENST00000549455 SCAF11Q99590 1463 aaKnown RBP22.77■■□□□ 1.24
ATXN2-218ENST00000549455 PIK3C2BO00750 1634 aa22.76■■□□□ 1.23
ATXN2-218ENST00000549455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.76■■□□□ 1.23
ATXN2-218ENST00000549455 LRRC7Q96NW7 1537 aa22.76■■□□□ 1.23
ATXN2-218ENST00000549455 ARHGAP31Q2M1Z3 1444 aa22.75■■□□□ 1.23
ATXN2-218ENST00000549455 FGD6Q6ZV73 1430 aa22.74■■□□□ 1.23
ATXN2-218ENST00000549455 SLIT1O75093 1534 aa22.73■■□□□ 1.23
ATXN2-218ENST00000549455 ARHGAP23Q9P227 1491 aa22.73■■□□□ 1.23
ATXN2-218ENST00000549455 KANK1Q14678 1352 aa22.72■■□□□ 1.23
ATXN2-218ENST00000549455 SENP3Q9H4L4 574 aaPredicted RBP22.7■■□□□ 1.22
ATXN2-218ENST00000549455 CHIC2Q9UKJ5 165 aa22.7■■□□□ 1.22
ATXN2-218ENST00000549455 LTKP29376 864 aa22.69■■□□□ 1.22
ATXN2-218ENST00000549455 TXNDC2Q86VQ3 553 aa22.69■■□□□ 1.22
ATXN2-218ENST00000549455 XIRP1Q702N8 1843 aaKnown RBP22.68■■□□□ 1.22
ATXN2-218ENST00000549455 ANKRD30AQ9BXX3 1397 aa22.68■■□□□ 1.22
ATXN2-218ENST00000549455 KDM5AP29375 1690 aaKnown RBP22.66■■□□□ 1.22
ATXN2-218ENST00000549455 STAG3Q9UJ98 1225 aa22.66■■□□□ 1.22
ATXN2-218ENST00000549455 EID1Q9Y6B2 187 aa22.66■■□□□ 1.22
ATXN2-218ENST00000549455 LMTK2Q8IWU2 1503 aa22.66■■□□□ 1.22
ATXN2-218ENST00000549455 EFCAB6Q5THR3 1501 aa22.65■■□□□ 1.22
ATXN2-218ENST00000549455 TMEM2Q9UHN6 1383 aa22.63■■□□□ 1.21
ATXN2-218ENST00000549455 PHF23Q9BUL5 403 aaPredicted RBP22.6■■□□□ 1.21
ATXN2-218ENST00000549455 ADGRL2O95490 1459 aa22.6■■□□□ 1.21
ATXN2-218ENST00000549455 ADGRB3O60242 1522 aa22.59■■□□□ 1.21
ATXN2-218ENST00000549455 IDI1Q13907 227 aa22.58■■□□□ 1.21
ATXN2-218ENST00000549455 FAM50AQ14320 339 aaKnown RBP22.57■■□□□ 1.2
ATXN2-218ENST00000549455 MYO5BQ9ULV0 1848 aa22.56■■□□□ 1.2
ATXN2-218ENST00000549455 NOS1P29475 1434 aa22.56■■□□□ 1.2
ATXN2-218ENST00000549455 GCC2Q8IWJ2 1684 aa22.53■■□□□ 1.2
ATXN2-218ENST00000549455 TET3O43151 1660 aa22.52■■□□□ 1.2
ATXN2-218ENST00000549455 ANKRD50Q9ULJ7 1429 aa22.52■■□□□ 1.2
ATXN2-218ENST00000549455 SLC26A8Q96RN1 970 aa22.51■■□□□ 1.19
ATXN2-218ENST00000549455 TMEM94Q12767 1356 aa22.5■■□□□ 1.19
ATXN2-218ENST00000549455 RPRD2Q5VT52 1461 aaKnown RBP22.49■■□□□ 1.19
ATXN2-218ENST00000549455 NWD1Q149M9 1564 aa22.49■■□□□ 1.19
ATXN2-218ENST00000549455 KCNA6P17658 529 aa22.48■■□□□ 1.19
ATXN2-218ENST00000549455 BCANQ96GW7 911 aa22.48■■□□□ 1.19
ATXN2-218ENST00000549455 UNC13BO14795 1591 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms