RNA–Protein interactions for RNA: ENST00000548883.5

C12orf42-208, Transcript of chromosome 12 open reading frame 42, human

APPRIS P2 TSL 1 (best) BASIC

Gene C12orf42, Length 1,336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C12orf42-208	ENST00000548883	PTPRT	O14522	1441 aa		32.06	■■■□□ 2.72
C12orf42-208	ENST00000548883	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.06	■■■□□ 2.72
C12orf42-208	ENST00000548883	CAMSAP1	Q5T5Y3	1602 aa		32.06	■■■□□ 2.72
C12orf42-208	ENST00000548883	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.03	■■■□□ 2.72
C12orf42-208	ENST00000548883	RNF17	Q9BXT8	1623 aa	Known RBP	32.01	■■■□□ 2.72
C12orf42-208	ENST00000548883	CERK	Q8TCT0	537 aa		32	■■■□□ 2.71
C12orf42-208	ENST00000548883	CROCC2	H7BZ55	1655 aa		32	■■■□□ 2.71
C12orf42-208	ENST00000548883	PTPN23	Q9H3S7	1636 aa		32	■■■□□ 2.71
C12orf42-208	ENST00000548883	PZP	P20742	1482 aa		31.97	■■■□□ 2.71
C12orf42-208	ENST00000548883	ZC3H13	Q5T200	1668 aa	Known RBP	31.97	■■■□□ 2.71
C12orf42-208	ENST00000548883	PLA2R1	Q13018	1463 aa		31.97	■■■□□ 2.71
C12orf42-208	ENST00000548883	WASHC2C	Q9Y4E1	1318 aa		31.95	■■■□□ 2.71
C12orf42-208	ENST00000548883	SHANK2	Q9UPX8	1470 aa		31.95	■■■□□ 2.71
C12orf42-208	ENST00000548883	A2ML1	A8K2U0	1454 aa		31.92	■■■□□ 2.7
C12orf42-208	ENST00000548883	DUOX2	Q9NRD8	1548 aa		31.92	■■■□□ 2.7
C12orf42-208	ENST00000548883	FGD6	Q6ZV73	1430 aa		31.91	■■■□□ 2.7
C12orf42-208	ENST00000548883	DNMT1	P26358	1616 aa	Known RBP	31.9	■■■□□ 2.7
C12orf42-208	ENST00000548883	TCOF1	Q13428	1488 aa	Known RBP	31.89	■■■□□ 2.7
C12orf42-208	ENST00000548883	TNR	Q92752	1358 aa		31.89	■■■□□ 2.7
C12orf42-208	ENST00000548883	ABCC3	O15438	1527 aa		31.87	■■■□□ 2.69
C12orf42-208	ENST00000548883	MROH1	Q8NDA8	1641 aa		31.87	■■■□□ 2.69
C12orf42-208	ENST00000548883	ABCC5	O15440	1437 aa		31.86	■■■□□ 2.69
C12orf42-208	ENST00000548883	PKD2	Q13563	968 aa		31.85	■■■□□ 2.69
C12orf42-208	ENST00000548883	DAPK1	P53355	1430 aa		31.85	■■■□□ 2.69
C12orf42-208	ENST00000548883	FBXO31	Q5XUX0	539 aa	Predicted RBP	31.83	■■■□□ 2.69
C12orf42-208	ENST00000548883	LTBP4	Q8N2S1	1624 aa		31.83	■■■□□ 2.69
C12orf42-208	ENST00000548883	NCKAP5L	Q9HCH0	1330 aa		31.83	■■■□□ 2.69
C12orf42-208	ENST00000548883	CEP152	O94986	1710 aa		31.82	■■■□□ 2.68
C12orf42-208	ENST00000548883	KIF15	Q9NS87	1388 aa		31.82	■■■□□ 2.68
C12orf42-208	ENST00000548883	POLR1A	O95602	1720 aa	Predicted RBP	31.81	■■■□□ 2.68
C12orf42-208	ENST00000548883	ERBIN	Q96RT1	1412 aa		31.81	■■■□□ 2.68
C12orf42-208	ENST00000548883	NLRP1	Q9C000	1473 aa		31.8	■■■□□ 2.68
C12orf42-208	ENST00000548883	PRDM15	P57071	1507 aa	Predicted RBP	31.79	■■■□□ 2.68
C12orf42-208	ENST00000548883	SPATA31D1	Q6ZQQ2	1576 aa		31.77	■■■□□ 2.68
C12orf42-208	ENST00000548883	IQSEC2	Q5JU85	1478 aa		31.76	■■■□□ 2.67
C12orf42-208	ENST00000548883	DEPDC5	O75140	1603 aa		31.74	■■■□□ 2.67
C12orf42-208	ENST00000548883	UGGT1	Q9NYU2	1555 aa		31.73	■■■□□ 2.67
C12orf42-208	ENST00000548883	RRP7BP	Q9NSQ0	103 aa		31.72	■■■□□ 2.67
C12orf42-208	ENST00000548883	ERVK-7	P63135	1459 aa		31.72	■■■□□ 2.67
C12orf42-208	ENST00000548883	ANKRD30A	Q9BXX3	1397 aa		31.7	■■■□□ 2.67
C12orf42-208	ENST00000548883	NEURL4	Q96JN8	1562 aa		31.7	■■■□□ 2.66
C12orf42-208	ENST00000548883	THEMIS	Q8N1K5	641 aa	Predicted RBP	31.66	■■■□□ 2.66
C12orf42-208	ENST00000548883	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	31.66	■■■□□ 2.66
C12orf42-208	ENST00000548883	ADGRL2	O95490	1459 aa		31.64	■■■□□ 2.66
C12orf42-208	ENST00000548883	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	31.64	■■■□□ 2.66
C12orf42-208	ENST00000548883	ARHGAP31	Q2M1Z3	1444 aa		31.63	■■■□□ 2.65
C12orf42-208	ENST00000548883	CFAP65	Q6ZU64	1925 aa	Known RBP	31.63	■■■□□ 2.65
C12orf42-208	ENST00000548883	CHIC2	Q9UKJ5	165 aa		31.62	■■■□□ 2.65
C12orf42-208	ENST00000548883	KANK1	Q14678	1352 aa		31.61	■■■□□ 2.65
C12orf42-208	ENST00000548883	FAM50A	Q14320	339 aa	Known RBP	31.59	■■■□□ 2.65
C12orf42-208	ENST00000548883	ANKLE2	Q86XL3	938 aa		31.59	■■■□□ 2.65
C12orf42-208	ENST00000548883	UBR1	Q8IWV7	1749 aa		31.59	■■■□□ 2.65
C12orf42-208	ENST00000548883	VWDE	Q8N2E2	1590 aa		31.56	■■■□□ 2.64
C12orf42-208	ENST00000548883	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	31.56	■■■□□ 2.64
C12orf42-208	ENST00000548883	LMTK2	Q8IWU2	1503 aa		31.56	■■■□□ 2.64
C12orf42-208	ENST00000548883	MED14	O60244	1454 aa		31.56	■■■□□ 2.64
C12orf42-208	ENST00000548883	IQGAP1	P46940	1657 aa		31.55	■■■□□ 2.64
C12orf42-208	ENST00000548883	NPHP4	O75161	1426 aa	Predicted RBP	31.53	■■■□□ 2.64
C12orf42-208	ENST00000548883	CPS1	P31327	1500 aa		31.51	■■■□□ 2.64
C12orf42-208	ENST00000548883	EFCAB6	Q5THR3	1501 aa		31.48	■■■□□ 2.63
C12orf42-208	ENST00000548883	ANKRD50	Q9ULJ7	1429 aa		31.47	■■■□□ 2.63
C12orf42-208	ENST00000548883	PIK3C2B	O00750	1634 aa		31.46	■■■□□ 2.63
C12orf42-208	ENST00000548883	KDM5A	P29375	1690 aa	Known RBP	31.44	■■■□□ 2.62
C12orf42-208	ENST00000548883	SLIT1	O75093	1534 aa		31.43	■■■□□ 2.62
C12orf42-208	ENST00000548883	SCAF11	Q99590	1463 aa	Known RBP	31.42	■■■□□ 2.62
C12orf42-208	ENST00000548883	ARHGAP23	Q9P227	1491 aa		31.42	■■■□□ 2.62
C12orf42-208	ENST00000548883	SYNM	O15061	1565 aa		31.39	■■■□□ 2.62
C12orf42-208	ENST00000548883	UBAP1L	F5GYI3	381 aa		31.39	■■■□□ 2.62
C12orf42-208	ENST00000548883	UNC13B	O14795	1591 aa		31.38	■■■□□ 2.61
C12orf42-208	ENST00000548883	TET3	O43151	1660 aa		31.37	■■■□□ 2.61
C12orf42-208	ENST00000548883	RPRD2	Q5VT52	1461 aa	Known RBP	31.36	■■■□□ 2.61
C12orf42-208	ENST00000548883	NOS1	P29475	1434 aa		31.36	■■■□□ 2.61
C12orf42-208	ENST00000548883	ROCK1	Q13464	1354 aa		31.35	■■■□□ 2.61
C12orf42-208	ENST00000548883	GCC2	Q8IWJ2	1684 aa		31.34	■■■□□ 2.61
C12orf42-208	ENST00000548883	STAG3	Q9UJ98	1225 aa		31.32	■■■□□ 2.6
C12orf42-208	ENST00000548883	ADGRB3	O60242	1522 aa		31.31	■■■□□ 2.6
C12orf42-208	ENST00000548883	STRCP1	A6NGW2	1772 aa		31.31	■■■□□ 2.6
C12orf42-208	ENST00000548883	TXNDC2	Q86VQ3	553 aa		31.3	■■■□□ 2.6
C12orf42-208	ENST00000548883	EID1	Q9Y6B2	187 aa		31.3	■■■□□ 2.6
C12orf42-208	ENST00000548883	TMEM2	Q9UHN6	1383 aa		31.3	■■■□□ 2.6
C12orf42-208	ENST00000548883	LTK	P29376	864 aa		31.27	■■■□□ 2.6
C12orf42-208	ENST00000548883	IDI1	Q13907	227 aa		31.27	■■■□□ 2.6
C12orf42-208	ENST00000548883	IQGAP3	Q86VI3	1631 aa		31.25	■■■□□ 2.59
C12orf42-208	ENST00000548883	PPARGC1B	Q86YN6	1023 aa	Known RBP	31.24	■■■□□ 2.59
C12orf42-208	ENST00000548883	SLC52A1	Q9NWF4	448 aa		31.24	■■■□□ 2.59
C12orf42-208	ENST00000548883	TOM1	O60784	492 aa		31.23	■■■□□ 2.59
C12orf42-208	ENST00000548883	LRRC7	Q96NW7	1537 aa		31.22	■■■□□ 2.59
C12orf42-208	ENST00000548883		E9PCH4	1651 aa		31.21	■■■□□ 2.59
C12orf42-208	ENST00000548883	ITGAE	P38570	1179 aa		31.21	■■■□□ 2.59
C12orf42-208	ENST00000548883	DISP3	Q9P2K9	1392 aa		31.18	■■■□□ 2.58
C12orf42-208	ENST00000548883	SCAF1	Q9H7N4	1312 aa	Known RBP	31.17	■■■□□ 2.58
C12orf42-208	ENST00000548883	MYO5B	Q9ULV0	1848 aa		31.16	■■■□□ 2.58
C12orf42-208	ENST00000548883	PIP4K2B	P78356	416 aa		31.14	■■■□□ 2.58
C12orf42-208	ENST00000548883	RRBP1	Q9P2E9	1410 aa	Known RBP	31.13	■■■□□ 2.57
C12orf42-208	ENST00000548883	TMEM131L	A2VDJ0	1609 aa		31.13	■■■□□ 2.57
C12orf42-208	ENST00000548883	ALK	Q9UM73	1620 aa		31.13	■■■□□ 2.57
C12orf42-208	ENST00000548883	NUP155	O75694	1391 aa		31.1	■■■□□ 2.57
C12orf42-208	ENST00000548883	XIRP1	Q702N8	1843 aa	Known RBP	31.09	■■■□□ 2.57
C12orf42-208	ENST00000548883	ZFYVE9	O95405	1425 aa		31.07	■■■□□ 2.56
C12orf42-208	ENST00000548883	RIMS2	Q9UQ26	1411 aa		31.03	■■■□□ 2.56

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms