RNA–Protein interactions for RNA: ENST00000548883.5

C12orf42-208, Transcript of chromosome 12 open reading frame 42, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C12orf42, Length 1,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf42-208ENST00000548883 NISCHQ9Y2I1 1504 aa50.76■■■■■ 5.72
C12orf42-208ENST00000548883 CCDC180Q9P1Z9 1646 aa45.53■■■■■ 4.88
C12orf42-208ENST00000548883 ABCC9O60706 1549 aa45.06■■■■■ 4.8
C12orf42-208ENST00000548883 RB1CC1Q8TDY2 1594 aa43.14■■■■■ 4.5
C12orf42-208ENST00000548883 NACADO15069 1562 aa42.91■■■■■ 4.46
C12orf42-208ENST00000548883 DCAF8L2P0C7V8 631 aa42.57■■■■■ 4.41
C12orf42-208ENST00000548883 MYO15BQ96JP2 1530 aa42.44■■■■■ 4.38
C12orf42-208ENST00000548883 UNC13AQ9UPW8 1703 aa42.18■■■■■ 4.34
C12orf42-208ENST00000548883 ZCCHC6Q5VYS8 1495 aaKnown RBP42.16■■■■■ 4.34
C12orf42-208ENST00000548883 DCAF1Q9Y4B6 1507 aa42■■■■■ 4.31
C12orf42-208ENST00000548883 PABPN1Q86U42 306 aaKnown RBP eCLIP41.92■■■■■ 4.3
C12orf42-208ENST00000548883 DNAJC5BQ9UF47 199 aa41.85■■■■■ 4.29
C12orf42-208ENST00000548883 BICRAQ9NZM4 1560 aa41.81■■■■■ 4.28
C12orf42-208ENST00000548883 SCRIBQ14160 1630 aa41.42■■■■■ 4.22
C12orf42-208ENST00000548883 SHROOM4Q9ULL8 1493 aa41.39■■■■■ 4.22
C12orf42-208ENST00000548883 EIF4G1Q04637 1599 aaKnown RBP40.79■■■■■ 4.12
C12orf42-208ENST00000548883 CC2D2AQ9P2K1 1620 aa40.79■■■■■ 4.12
C12orf42-208ENST00000548883 CECR2Q9BXF3 1484 aa40.59■■■■■ 4.09
C12orf42-208ENST00000548883 SMARCA4P51532 1647 aa39.57■■■■□ 3.93
C12orf42-208ENST00000548883 NCAPD3P42695 1498 aa39.54■■■■□ 3.92
C12orf42-208ENST00000548883 ATAD2BQ9ULI0 1458 aa39.47■■■■□ 3.91
C12orf42-208ENST00000548883 SMARCA2P51531 1590 aa39.45■■■■□ 3.91
C12orf42-208ENST00000548883 BAZ1AQ9NRL2 1556 aaPredicted RBP39.42■■■■□ 3.9
C12orf42-208ENST00000548883 HMGXB3Q12766 1538 aa39.37■■■■□ 3.89
C12orf42-208ENST00000548883 PEG3Q9GZU2 1588 aa39.2■■■■□ 3.87
C12orf42-208ENST00000548883 BAZ1BQ9UIG0 1483 aaKnown RBP39.14■■■■□ 3.86
C12orf42-208ENST00000548883 MROH2BQ7Z745 1585 aa39.08■■■■□ 3.85
C12orf42-208ENST00000548883 ERCC6Q03468 1493 aa38.94■■■■□ 3.82
C12orf42-208ENST00000548883 CUX2O14529 1486 aa38.79■■■■□ 3.8
C12orf42-208ENST00000548883 NESP48681 1621 aa38.78■■■■□ 3.8
C12orf42-208ENST00000548883 LAMC3Q9Y6N6 1575 aa38.68■■■■□ 3.78
C12orf42-208ENST00000548883 WIZO95785 1651 aa38.67■■■■□ 3.78
C12orf42-208ENST00000548883 THOC2Q8NI27 1593 aaKnown RBP38.44■■■■□ 3.74
C12orf42-208ENST00000548883 KIF21AQ7Z4S6 1674 aa38.41■■■■□ 3.74
C12orf42-208ENST00000548883 PDS5BQ9NTI5 1447 aa38.39■■■■□ 3.74
C12orf42-208ENST00000548883 RSF1Q96T23 1441 aaPredicted RBP38.37■■■■□ 3.73
C12orf42-208ENST00000548883 CADPSQ9ULU8 1353 aa38.34■■■■□ 3.73
C12orf42-208ENST00000548883 DNAJC5Q9H3Z4 198 aa38.27■■■■□ 3.72
C12orf42-208ENST00000548883 TOP2AP11388 1531 aaKnown RBP38.24■■■■□ 3.71
C12orf42-208ENST00000548883 MRC2Q9UBG0 1479 aa38.05■■■■□ 3.68
C12orf42-208ENST00000548883 CFTRP13569 1480 aa38■■■■□ 3.67
C12orf42-208ENST00000548883 WDR62O43379 1518 aa37.98■■■■□ 3.67
C12orf42-208ENST00000548883 CEP164Q9UPV0 1460 aa37.98■■■■□ 3.67
C12orf42-208ENST00000548883 FANCD2Q9BXW9 1451 aa37.93■■■■□ 3.66
C12orf42-208ENST00000548883 PRDM2Q13029 1718 aa37.8■■■■□ 3.64
C12orf42-208ENST00000548883 CCDC88BA6NC98 1476 aa37.71■■■■□ 3.63
C12orf42-208ENST00000548883 URB2Q14146 1524 aaKnown RBP37.59■■■■□ 3.61
C12orf42-208ENST00000548883 TOPBP1Q92547 1522 aa37.26■■■■□ 3.55
C12orf42-208ENST00000548883 ABCC8Q09428 1581 aa37.24■■■■□ 3.55
C12orf42-208ENST00000548883 IFT140Q96RY7 1462 aa37.2■■■■□ 3.55
C12orf42-208ENST00000548883 DNMBPQ6XZF7 1577 aa37.2■■■■□ 3.55
C12orf42-208ENST00000548883 ZNF608Q9ULD9 1512 aaPredicted RBP37.05■■■■□ 3.52
C12orf42-208ENST00000548883 EIF4G3O43432 1585 aaKnown RBP36.97■■■■□ 3.51
C12orf42-208ENST00000548883 OSCARQ8IYS5 282 aa36.96■■■■□ 3.51
C12orf42-208ENST00000548883 TARBP1Q13395 1621 aaKnown RBP36.93■■■■□ 3.5
C12orf42-208ENST00000548883 POLA1P09884 1462 aaPredicted RBP36.9■■■■□ 3.5
C12orf42-208ENST00000548883 SUPT5HO00267 1087 aaKnown RBP36.83■■■■□ 3.49
C12orf42-208ENST00000548883 AQRO60306 1485 aaKnown RBP eCLIP36.73■■■■□ 3.47
C12orf42-208ENST00000548883 TRIM41Q8WV44 630 aa36.73■■■■□ 3.47
C12orf42-208ENST00000548883 FGD5Q6ZNL6 1462 aa36.72■■■■□ 3.47
C12orf42-208ENST00000548883 CUX1P39880 1505 aa36.71■■■■□ 3.47
C12orf42-208ENST00000548883 RAD54L2Q9Y4B4 1467 aa36.7■■■■□ 3.47
C12orf42-208ENST00000548883 SOGA1O94964 1423 aa36.69■■■■□ 3.46
C12orf42-208ENST00000548883 WDR97A6NE52 1622 aa36.66■■■■□ 3.46
C12orf42-208ENST00000548883 CHD1O14646 1710 aa36.64■■■■□ 3.46
C12orf42-208ENST00000548883 RIMBP3CA6NJZ7 1639 aa36.54■■■■□ 3.44
C12orf42-208ENST00000548883 RIMBP3BA6NNM3 1639 aa36.54■■■■□ 3.44
C12orf42-208ENST00000548883 RIMBP3Q9UFD9 1639 aa36.54■■■■□ 3.44
C12orf42-208ENST00000548883 TDRD9Q8NDG6 1382 aaKnown RBP36.54■■■■□ 3.44
C12orf42-208ENST00000548883 ARHGEF11O15085 1522 aa36.44■■■■□ 3.42
C12orf42-208ENST00000548883 SNAPC4Q5SXM2 1469 aa36.43■■■■□ 3.42
C12orf42-208ENST00000548883 FBLN2P98095 1184 aa36.41■■■■□ 3.42
C12orf42-208ENST00000548883 GRIN2BQ13224 1484 aa36.38■■■■□ 3.41
C12orf42-208ENST00000548883 MAGI1Q96QZ7 1491 aaPredicted RBP36.38■■■■□ 3.41
C12orf42-208ENST00000548883 PBRM1Q86U86 1689 aa36.35■■■■□ 3.41
C12orf42-208ENST00000548883 ABCA10Q8WWZ4 1543 aa36.32■■■■□ 3.41
C12orf42-208ENST00000548883 ABCA5Q8WWZ7 1642 aa36.29■■■■□ 3.4
C12orf42-208ENST00000548883 BIVM-ERCC5R4GMW8 1640 aa36.29■■■■□ 3.4
C12orf42-208ENST00000548883 GAPVD1Q14C86 1478 aa36.28■■■■□ 3.4
C12orf42-208ENST00000548883 TOP2BQ02880 1626 aa36.27■■■■□ 3.4
C12orf42-208ENST00000548883 SYNJ2O15056 1496 aa36.24■■■■□ 3.39
C12orf42-208ENST00000548883 SYNJ1O43426 1573 aa36.24■■■■□ 3.39
C12orf42-208ENST00000548883 WRNQ14191 1432 aaPredicted RBP eCLIP36.23■■■■□ 3.39
C12orf42-208ENST00000548883 CHMP7Q8WUX9 453 aaPredicted RBP36.22■■■■□ 3.39
C12orf42-208ENST00000548883 CLASP1Q7Z460 1538 aa36.19■■■■□ 3.38
C12orf42-208ENST00000548883 ARAP1Q96P48 1450 aa36.08■■■■□ 3.37
C12orf42-208ENST00000548883 CYB5RLQ6IPT4 315 aa36.05■■■■□ 3.36
C12orf42-208ENST00000548883 ADAMTS12P58397 1594 aa35.99■■■■□ 3.35
C12orf42-208ENST00000548883 GRIN2AQ12879 1464 aa35.92■■■■□ 3.34
C12orf42-208ENST00000548883 ERICH3Q5RHP9 1530 aa35.91■■■■□ 3.34
C12orf42-208ENST00000548883 FHAD1B1AJZ9 1412 aa35.84■■■■□ 3.33
C12orf42-208ENST00000548883 CEP170Q5SW79 1584 aa35.79■■■■□ 3.32
C12orf42-208ENST00000548883 NUP160Q12769 1436 aa35.77■■■■□ 3.32
C12orf42-208ENST00000548883 SHROOM2Q13796 1616 aa35.64■■■■□ 3.3
C12orf42-208ENST00000548883 ERCC6L2Q5T890 1561 aa35.59■■■■□ 3.29
C12orf42-208ENST00000548883 TRHP20396 242 aaPredicted RBP35.57■■■■□ 3.29
C12orf42-208ENST00000548883 KIF27Q86VH2 1401 aa35.53■■■■□ 3.28
C12orf42-208ENST00000548883 CUL7Q14999 1698 aa35.5■■■■□ 3.27
C12orf42-208ENST00000548883 RUSC2Q8N2Y8 1516 aa35.5■■■■□ 3.27
C12orf42-208ENST00000548883 IGF1RP08069 1367 aa35.4■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms