RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 FBXO31Q5XUX0 539 aaPredicted RBP26.44■■□□□ 1.82
SSH1-208ENST00000548522 KIF3BO15066 747 aa26.43■■□□□ 1.82
SSH1-208ENST00000548522 KDM5DQ9BY66 1539 aa26.42■■□□□ 1.82
SSH1-208ENST00000548522 TNRQ92752 1358 aa26.4■■□□□ 1.82
SSH1-208ENST00000548522 PZPP20742 1482 aa26.4■■□□□ 1.82
SSH1-208ENST00000548522 UBAP1LF5GYI3 381 aa26.38■■□□□ 1.81
SSH1-208ENST00000548522 NEURL4Q96JN8 1562 aa26.37■■□□□ 1.81
SSH1-208ENST00000548522 ARHGEF5Q12774 1597 aa26.35■■□□□ 1.81
SSH1-208ENST00000548522 FAM135AQ9P2D6 1515 aa26.34■■□□□ 1.81
SSH1-208ENST00000548522 WASHC2CQ9Y4E1 1318 aa26.33■■□□□ 1.81
SSH1-208ENST00000548522 POLR1AO95602 1720 aaPredicted RBP26.31■■□□□ 1.8
SSH1-208ENST00000548522 LRRC9Q6ZRR7 1453 aa26.31■■□□□ 1.8
SSH1-208ENST00000548522 SOCS7O14512 581 aa26.31■■□□□ 1.8
SSH1-208ENST00000548522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.3■■□□□ 1.8
SSH1-208ENST00000548522 RSPH4AQ5TD94 716 aa26.29■■□□□ 1.8
SSH1-208ENST00000548522 VPS8Q8N3P4 1428 aa26.29■■□□□ 1.8
SSH1-208ENST00000548522 MIA2Q96PC5 1412 aa26.27■■□□□ 1.8
SSH1-208ENST00000548522 RNF17Q9BXT8 1623 aaKnown RBP26.25■■□□□ 1.79
SSH1-208ENST00000548522 ABCC3O15438 1527 aa26.24■■□□□ 1.79
SSH1-208ENST00000548522 NLRP1Q9C000 1473 aa26.24■■□□□ 1.79
SSH1-208ENST00000548522 LOC105371045A0A1W2PR82 267 aa26.24■■□□□ 1.79
SSH1-208ENST00000548522 TSPY4P0CV99 314 aa26.24■■□□□ 1.79
SSH1-208ENST00000548522 TSPY10P0CW01 314 aa26.24■■□□□ 1.79
SSH1-208ENST00000548522 UGGT1Q9NYU2 1555 aa26.24■■□□□ 1.79
SSH1-208ENST00000548522 SHANK2Q9UPX8 1470 aa26.23■■□□□ 1.79
SSH1-208ENST00000548522 KANK4Q5T7N3 995 aaPredicted RBP26.23■■□□□ 1.79
SSH1-208ENST00000548522 MAST1Q9Y2H9 1570 aa26.23■■□□□ 1.79
SSH1-208ENST00000548522 VWDEQ8N2E2 1590 aa26.22■■□□□ 1.79
SSH1-208ENST00000548522 CPS1P31327 1500 aa26.22■■□□□ 1.79
SSH1-208ENST00000548522 MROH1Q8NDA8 1641 aa26.21■■□□□ 1.79
SSH1-208ENST00000548522 ANKLE2Q86XL3 938 aa26.19■■□□□ 1.78
SSH1-208ENST00000548522 NPHP4O75161 1426 aaPredicted RBP26.19■■□□□ 1.78
SSH1-208ENST00000548522 SCAF1Q9H7N4 1312 aaKnown RBP26.18■■□□□ 1.78
SSH1-208ENST00000548522 PIP4K2BP78356 416 aa26.18■■□□□ 1.78
SSH1-208ENST00000548522 THEMISQ8N1K5 641 aaPredicted RBP26.18■■□□□ 1.78
SSH1-208ENST00000548522 MED14O60244 1454 aa26.17■■□□□ 1.78
SSH1-208ENST00000548522 ERVK-7P63135 1459 aa26.17■■□□□ 1.78
SSH1-208ENST00000548522 ZC3H13Q5T200 1668 aaKnown RBP26.16■■□□□ 1.78
SSH1-208ENST00000548522 MYOM3Q5VTT5 1437 aa26.16■■□□□ 1.78
SSH1-208ENST00000548522 HSPA1LP34931 641 aa26.16■■□□□ 1.78
SSH1-208ENST00000548522 DEPDC5O75140 1603 aa26.16■■□□□ 1.78
SSH1-208ENST00000548522 EIF2AK4Q9P2K8 1649 aaKnown RBP26.16■■□□□ 1.78
SSH1-208ENST00000548522 ALKQ9UM73 1620 aa26.13■■□□□ 1.77
SSH1-208ENST00000548522 MAP3K1Q13233 1512 aa26.12■■□□□ 1.77
SSH1-208ENST00000548522 IQGAP1P46940 1657 aa26.12■■□□□ 1.77
SSH1-208ENST00000548522 CEP152O94986 1710 aa26.11■■□□□ 1.77
SSH1-208ENST00000548522 TOM1O60784 492 aa26.08■■□□□ 1.77
SSH1-208ENST00000548522 DUOX2Q9NRD8 1548 aa26.08■■□□□ 1.77
SSH1-208ENST00000548522 STRCP1A6NGW2 1772 aa26.07■■□□□ 1.76
SSH1-208ENST00000548522 MED1Q15648 1581 aaPredicted RBP26.07■■□□□ 1.76
SSH1-208ENST00000548522 KIF15Q9NS87 1388 aa26.05■■□□□ 1.76
SSH1-208ENST00000548522 PRDM15P57071 1507 aaPredicted RBP26.04■■□□□ 1.76
SSH1-208ENST00000548522 UBR1Q8IWV7 1749 aa26.04■■□□□ 1.76
SSH1-208ENST00000548522 ABCC5O15440 1437 aa26.04■■□□□ 1.76
SSH1-208ENST00000548522 LRRC7Q96NW7 1537 aa26.04■■□□□ 1.76
SSH1-208ENST00000548522 CROCC2H7BZ55 1655 aa26.02■■□□□ 1.76
SSH1-208ENST00000548522 SCAF11Q99590 1463 aaKnown RBP26■■□□□ 1.75
SSH1-208ENST00000548522 RRP7BPQ9NSQ0 103 aa25.99■■□□□ 1.75
SSH1-208ENST00000548522 PTPN23Q9H3S7 1636 aa25.99■■□□□ 1.75
SSH1-208ENST00000548522 ERBINQ96RT1 1412 aa25.98■■□□□ 1.75
SSH1-208ENST00000548522 SYNMO15061 1565 aa25.98■■□□□ 1.75
SSH1-208ENST00000548522 ARHGAP23Q9P227 1491 aa25.98■■□□□ 1.75
SSH1-208ENST00000548522 LTKP29376 864 aa25.97■■□□□ 1.75
SSH1-208ENST00000548522 SENP3Q9H4L4 574 aaPredicted RBP25.97■■□□□ 1.75
SSH1-208ENST00000548522 ARHGAP31Q2M1Z3 1444 aa25.97■■□□□ 1.75
SSH1-208ENST00000548522 CFAP65Q6ZU64 1925 aaKnown RBP25.96■■□□□ 1.75
SSH1-208ENST00000548522 DAPK1P53355 1430 aa25.96■■□□□ 1.75
SSH1-208ENST00000548522 SLIT1O75093 1534 aa25.95■■□□□ 1.74
SSH1-208ENST00000548522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.94■■□□□ 1.74
SSH1-208ENST00000548522 FGD6Q6ZV73 1430 aa25.92■■□□□ 1.74
SSH1-208ENST00000548522 PIK3C2BO00750 1634 aa25.92■■□□□ 1.74
SSH1-208ENST00000548522 TXNDC2Q86VQ3 553 aa25.9■■□□□ 1.74
SSH1-208ENST00000548522 CHIC2Q9UKJ5 165 aa25.87■■□□□ 1.73
SSH1-208ENST00000548522 TMEM2Q9UHN6 1383 aa25.85■■□□□ 1.73
SSH1-208ENST00000548522 LMTK2Q8IWU2 1503 aa25.83■■□□□ 1.73
SSH1-208ENST00000548522 KANK1Q14678 1352 aa25.83■■□□□ 1.73
SSH1-208ENST00000548522 XIRP1Q702N8 1843 aaKnown RBP25.82■■□□□ 1.72
SSH1-208ENST00000548522 APLP2Q06481 763 aa25.82■■□□□ 1.72
SSH1-208ENST00000548522 EFCAB6Q5THR3 1501 aa25.82■■□□□ 1.72
SSH1-208ENST00000548522 ANKRD30AQ9BXX3 1397 aa25.82■■□□□ 1.72
SSH1-208ENST00000548522 PHF23Q9BUL5 403 aaPredicted RBP25.81■■□□□ 1.72
SSH1-208ENST00000548522 EID1Q9Y6B2 187 aa25.81■■□□□ 1.72
SSH1-208ENST00000548522 IDI1Q13907 227 aa25.8■■□□□ 1.72
SSH1-208ENST00000548522 STAG3Q9UJ98 1225 aa25.78■■□□□ 1.72
SSH1-208ENST00000548522 NOS1P29475 1434 aa25.77■■□□□ 1.72
SSH1-208ENST00000548522 ADGRB3O60242 1522 aa25.75■■□□□ 1.71
SSH1-208ENST00000548522 KDM5AP29375 1690 aaKnown RBP25.74■■□□□ 1.71
SSH1-208ENST00000548522 ADGRL2O95490 1459 aa25.74■■□□□ 1.71
SSH1-208ENST00000548522 TMEM94Q12767 1356 aa25.74■■□□□ 1.71
SSH1-208ENST00000548522 RBM33Q96EV2 1170 aaKnown RBP25.73■■□□□ 1.71
SSH1-208ENST00000548522 SLC26A8Q96RN1 970 aa25.73■■□□□ 1.71
SSH1-208ENST00000548522 TET3O43151 1660 aa25.73■■□□□ 1.71
SSH1-208ENST00000548522 KCNA6P17658 529 aa25.67■■□□□ 1.7
SSH1-208ENST00000548522 FAM50AQ14320 339 aaKnown RBP25.67■■□□□ 1.7
SSH1-208ENST00000548522 RGS17Q9UGC6 210 aaPredicted RBP25.67■■□□□ 1.7
SSH1-208ENST00000548522 FAM135BQ49AJ0 1406 aa25.66■■□□□ 1.7
SSH1-208ENST00000548522 ANKRD50Q9ULJ7 1429 aa25.66■■□□□ 1.7
SSH1-208ENST00000548522 NWD1Q149M9 1564 aa25.65■■□□□ 1.7
SSH1-208ENST00000548522 ZFYVE9O95405 1425 aa25.63■■□□□ 1.69
SSH1-208ENST00000548522 ROBO1Q9Y6N7 1651 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms