RNA–Protein interactions for RNA: ENST00000546129.1

CAPRIN2-215, Transcript of caprin family member 2, human

TSL 4

Gene CAPRIN2, Length 501 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPRIN2-215	ENST00000546129	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.38	■■■□□ 2.93
CAPRIN2-215	ENST00000546129	DISP3	Q9P2K9	1392 aa		33.37	■■■□□ 2.93
CAPRIN2-215	ENST00000546129	KIF3B	O15066	747 aa		33.36	■■■□□ 2.93
CAPRIN2-215	ENST00000546129	RSPH4A	Q5TD94	716 aa		33.35	■■■□□ 2.93
CAPRIN2-215	ENST00000546129	SPATA31D1	Q6ZQQ2	1576 aa		33.34	■■■□□ 2.93
CAPRIN2-215	ENST00000546129	PZP	P20742	1482 aa		33.33	■■■□□ 2.93
CAPRIN2-215	ENST00000546129	TNR	Q92752	1358 aa		33.3	■■■□□ 2.92
CAPRIN2-215	ENST00000546129	LRRC9	Q6ZRR7	1453 aa		33.3	■■■□□ 2.92
CAPRIN2-215	ENST00000546129	VPS8	Q8N3P4	1428 aa		33.28	■■■□□ 2.92
CAPRIN2-215	ENST00000546129	NEURL4	Q96JN8	1562 aa		33.27	■■■□□ 2.92
CAPRIN2-215	ENST00000546129	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.27	■■■□□ 2.92
CAPRIN2-215	ENST00000546129	RNF17	Q9BXT8	1623 aa	Known RBP	33.26	■■■□□ 2.91
CAPRIN2-215	ENST00000546129	WASHC2C	Q9Y4E1	1318 aa		33.26	■■■□□ 2.91
CAPRIN2-215	ENST00000546129	MAST1	Q9Y2H9	1570 aa		33.26	■■■□□ 2.91
CAPRIN2-215	ENST00000546129	ZC3H13	Q5T200	1668 aa	Known RBP	33.24	■■■□□ 2.91
CAPRIN2-215	ENST00000546129	TSPY4	P0CV99	314 aa		33.23	■■■□□ 2.91
CAPRIN2-215	ENST00000546129	TSPY10	P0CW01	314 aa		33.23	■■■□□ 2.91
CAPRIN2-215	ENST00000546129	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.21	■■■□□ 2.91
CAPRIN2-215	ENST00000546129	UBAP1L	F5GYI3	381 aa		33.2	■■■□□ 2.91
CAPRIN2-215	ENST00000546129	ILDR2	Q71H61	639 aa		33.2	■■■□□ 2.91
CAPRIN2-215	ENST00000546129	NLRP1	Q9C000	1473 aa		33.18	■■■□□ 2.9
CAPRIN2-215	ENST00000546129	MAP3K1	Q13233	1512 aa		33.17	■■■□□ 2.9
CAPRIN2-215	ENST00000546129	CFAP65	Q6ZU64	1925 aa	Known RBP	33.16	■■■□□ 2.9
CAPRIN2-215	ENST00000546129	MIA2	Q96PC5	1412 aa		33.16	■■■□□ 2.9
CAPRIN2-215	ENST00000546129	UGGT1	Q9NYU2	1555 aa		33.16	■■■□□ 2.9
CAPRIN2-215	ENST00000546129	CEP152	O94986	1710 aa		33.16	■■■□□ 2.9
CAPRIN2-215	ENST00000546129	ABCC3	O15438	1527 aa		33.14	■■■□□ 2.9
CAPRIN2-215	ENST00000546129	LOC105371045	A0A1W2PR82	267 aa		33.14	■■■□□ 2.9
CAPRIN2-215	ENST00000546129	DEPDC5	O75140	1603 aa		33.13	■■■□□ 2.89
CAPRIN2-215	ENST00000546129	CPS1	P31327	1500 aa		33.12	■■■□□ 2.89
CAPRIN2-215	ENST00000546129	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.12	■■■□□ 2.89	7e-9	■■■□□ 15.6
CAPRIN2-215	ENST00000546129	MROH1	Q8NDA8	1641 aa		33.11	■■■□□ 2.89
CAPRIN2-215	ENST00000546129	MYOM3	Q5VTT5	1437 aa		33.11	■■■□□ 2.89
CAPRIN2-215	ENST00000546129	KANK4	Q5T7N3	995 aa	Predicted RBP	33.09	■■■□□ 2.89
CAPRIN2-215	ENST00000546129	SHANK2	Q9UPX8	1470 aa		33.09	■■■□□ 2.89
CAPRIN2-215	ENST00000546129	CROCC2	H7BZ55	1655 aa		33.09	■■■□□ 2.89
CAPRIN2-215	ENST00000546129	IQGAP1	P46940	1657 aa		33.09	■■■□□ 2.89
CAPRIN2-215	ENST00000546129	ANKLE2	Q86XL3	938 aa		33.08	■■■□□ 2.89
CAPRIN2-215	ENST00000546129	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.08	■■■□□ 2.89
CAPRIN2-215	ENST00000546129	VWDE	Q8N2E2	1590 aa		33.07	■■■□□ 2.88
CAPRIN2-215	ENST00000546129	MED14	O60244	1454 aa		33.05	■■■□□ 2.88
CAPRIN2-215	ENST00000546129	SOCS7	O14512	581 aa		33.04	■■■□□ 2.88
CAPRIN2-215	ENST00000546129	DUOX2	Q9NRD8	1548 aa		33.03	■■■□□ 2.88
CAPRIN2-215	ENST00000546129	NPHP4	O75161	1426 aa	Predicted RBP	33.02	■■■□□ 2.88
CAPRIN2-215	ENST00000546129	ERVK-7	P63135	1459 aa		33.02	■■■□□ 2.88
CAPRIN2-215	ENST00000546129	UBR1	Q8IWV7	1749 aa		33.02	■■■□□ 2.88
CAPRIN2-215	ENST00000546129	STRCP1	A6NGW2	1772 aa		32.98	■■■□□ 2.87
CAPRIN2-215	ENST00000546129	PTPN23	Q9H3S7	1636 aa		32.97	■■■□□ 2.87
CAPRIN2-215	ENST00000546129	SCAF1	Q9H7N4	1312 aa	Known RBP	32.95	■■■□□ 2.86
CAPRIN2-215	ENST00000546129	PRDM15	P57071	1507 aa	Predicted RBP	32.94	■■■□□ 2.86
CAPRIN2-215	ENST00000546129	TOM1	O60784	492 aa		32.92	■■■□□ 2.86
CAPRIN2-215	ENST00000546129	PIP4K2B	P78356	416 aa		32.92	■■■□□ 2.86
CAPRIN2-215	ENST00000546129	SYNM	O15061	1565 aa		32.89	■■■□□ 2.86
CAPRIN2-215	ENST00000546129	KIF15	Q9NS87	1388 aa		32.89	■■■□□ 2.86
CAPRIN2-215	ENST00000546129	ABCC5	O15440	1437 aa		32.88	■■■□□ 2.85
CAPRIN2-215	ENST00000546129	ERBIN	Q96RT1	1412 aa		32.88	■■■□□ 2.85
CAPRIN2-215	ENST00000546129	ALK	Q9UM73	1620 aa		32.87	■■■□□ 2.85
CAPRIN2-215	ENST00000546129	HSPA1L	P34931	641 aa		32.86	■■■□□ 2.85
CAPRIN2-215	ENST00000546129	DAPK1	P53355	1430 aa		32.83	■■■□□ 2.85
CAPRIN2-215	ENST00000546129	ARHGAP31	Q2M1Z3	1444 aa		32.83	■■■□□ 2.85
CAPRIN2-215	ENST00000546129	MED1	Q15648	1581 aa	Predicted RBP	32.83	■■■□□ 2.85
CAPRIN2-215	ENST00000546129	SCAF11	Q99590	1463 aa	Known RBP	32.81	■■■□□ 2.84
CAPRIN2-215	ENST00000546129	PIK3C2B	O00750	1634 aa		32.81	■■■□□ 2.84
CAPRIN2-215	ENST00000546129	APLP2	Q06481	763 aa		32.81	■■■□□ 2.84
CAPRIN2-215	ENST00000546129	RRP7BP	Q9NSQ0	103 aa		32.81	■■■□□ 2.84
CAPRIN2-215	ENST00000546129	LRRC7	Q96NW7	1537 aa		32.81	■■■□□ 2.84
CAPRIN2-215	ENST00000546129	SLIT1	O75093	1534 aa		32.8	■■■□□ 2.84
CAPRIN2-215	ENST00000546129	FGD6	Q6ZV73	1430 aa		32.78	■■■□□ 2.84
CAPRIN2-215	ENST00000546129	ARHGAP23	Q9P227	1491 aa		32.78	■■■□□ 2.84
CAPRIN2-215	ENST00000546129	XIRP1	Q702N8	1843 aa	Known RBP	32.76	■■■□□ 2.83
CAPRIN2-215	ENST00000546129	KDM5A	P29375	1690 aa	Known RBP	32.75	■■■□□ 2.83
CAPRIN2-215	ENST00000546129	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.74	■■■□□ 2.83	2e-6	■■□□□ 12.1
CAPRIN2-215	ENST00000546129	KANK1	Q14678	1352 aa		32.71	■■■□□ 2.83
CAPRIN2-215	ENST00000546129	LTK	P29376	864 aa		32.7	■■■□□ 2.83
CAPRIN2-215	ENST00000546129	LMTK2	Q8IWU2	1503 aa		32.69	■■■□□ 2.82
CAPRIN2-215	ENST00000546129	TXNDC2	Q86VQ3	553 aa		32.69	■■■□□ 2.82
CAPRIN2-215	ENST00000546129	ANKRD30A	Q9BXX3	1397 aa		32.69	■■■□□ 2.82
CAPRIN2-215	ENST00000546129	CHIC2	Q9UKJ5	165 aa		32.65	■■■□□ 2.82
CAPRIN2-215	ENST00000546129	EFCAB6	Q5THR3	1501 aa		32.64	■■■□□ 2.82
CAPRIN2-215	ENST00000546129	EID1	Q9Y6B2	187 aa		32.64	■■■□□ 2.82
CAPRIN2-215	ENST00000546129	TMEM2	Q9UHN6	1383 aa		32.62	■■■□□ 2.81
CAPRIN2-215	ENST00000546129	STAG3	Q9UJ98	1225 aa		32.6	■■■□□ 2.81
CAPRIN2-215	ENST00000546129	SENP3	Q9H4L4	574 aa	Predicted RBP	32.58	■■■□□ 2.81
CAPRIN2-215	ENST00000546129	ADGRL2	O95490	1459 aa		32.58	■■■□□ 2.81
CAPRIN2-215	ENST00000546129	MYO5B	Q9ULV0	1848 aa		32.56	■■■□□ 2.8
CAPRIN2-215	ENST00000546129	ADGRB3	O60242	1522 aa		32.56	■■■□□ 2.8
CAPRIN2-215	ENST00000546129	IDI1	Q13907	227 aa		32.54	■■■□□ 2.8
CAPRIN2-215	ENST00000546129	NOS1	P29475	1434 aa		32.53	■■■□□ 2.8
CAPRIN2-215	ENST00000546129	TET3	O43151	1660 aa		32.51	■■■□□ 2.79
CAPRIN2-215	ENST00000546129	PHF23	Q9BUL5	403 aa	Predicted RBP	32.5	■■■□□ 2.79
CAPRIN2-215	ENST00000546129	GCC2	Q8IWJ2	1684 aa		32.49	■■■□□ 2.79
CAPRIN2-215	ENST00000546129	FAM50A	Q14320	339 aa	Known RBP	32.47	■■■□□ 2.79
CAPRIN2-215	ENST00000546129	RPRD2	Q5VT52	1461 aa	Known RBP	32.46	■■■□□ 2.79
CAPRIN2-215	ENST00000546129	ANKRD50	Q9ULJ7	1429 aa		32.44	■■■□□ 2.78
CAPRIN2-215	ENST00000546129	NWD1	Q149M9	1564 aa		32.43	■■■□□ 2.78
CAPRIN2-215	ENST00000546129	UNC13B	O14795	1591 aa		32.41	■■■□□ 2.78
CAPRIN2-215	ENST00000546129	SLC26A8	Q96RN1	970 aa		32.41	■■■□□ 2.78
CAPRIN2-215	ENST00000546129	SLC52A1	Q9NWF4	448 aa		32.41	■■■□□ 2.78
CAPRIN2-215	ENST00000546129	TMEM94	Q12767	1356 aa		32.41	■■■□□ 2.78
CAPRIN2-215	ENST00000546129	KCNA6	P17658	529 aa		32.4	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms