RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 CEP162Q5TB80 1403 aa13.9□□□□□ -0.19
COPB1-210ENST00000533533 SPATA31D1Q6ZQQ2 1576 aa13.88□□□□□ -0.19
COPB1-210ENST00000533533 DHX29Q7Z478 1369 aaKnown RBP13.88□□□□□ -0.19
COPB1-210ENST00000533533 SOCS7O14512 581 aa13.87□□□□□ -0.19
COPB1-210ENST00000533533 A2ML1A8K2U0 1454 aa13.87□□□□□ -0.19
COPB1-210ENST00000533533 DNMT1P26358 1616 aaKnown RBP13.86□□□□□ -0.19
COPB1-210ENST00000533533 UBAP1LF5GYI3 381 aa13.85□□□□□ -0.19
COPB1-210ENST00000533533 CCDC141Q6ZP82 1450 aa13.85□□□□□ -0.19
COPB1-210ENST00000533533 KIF3BO15066 747 aa13.84□□□□□ -0.19
COPB1-210ENST00000533533 RSPH4AQ5TD94 716 aa13.84□□□□□ -0.19
COPB1-210ENST00000533533 NCOA2Q15596 1464 aa13.84□□□□□ -0.19
COPB1-210ENST00000533533 CAMSAP2Q08AD1 1489 aa13.83□□□□□ -0.2
COPB1-210ENST00000533533 FAM135AQ9P2D6 1515 aa13.83□□□□□ -0.2
COPB1-210ENST00000533533 TNRQ92752 1358 aa13.83□□□□□ -0.2
COPB1-210ENST00000533533 POLR1AO95602 1720 aaPredicted RBP13.82□□□□□ -0.2
COPB1-210ENST00000533533 KDM5DQ9BY66 1539 aa13.82□□□□□ -0.2
COPB1-210ENST00000533533 FBXO31Q5XUX0 539 aaPredicted RBP13.82□□□□□ -0.2
COPB1-210ENST00000533533 PZPP20742 1482 aa13.81□□□□□ -0.2
COPB1-210ENST00000533533 WASHC2CQ9Y4E1 1318 aa13.81□□□□□ -0.2
COPB1-210ENST00000533533 ARHGEF5Q12774 1597 aa13.79□□□□□ -0.2
COPB1-210ENST00000533533 NEURL4Q96JN8 1562 aa13.79□□□□□ -0.2
COPB1-210ENST00000533533 TSPY4P0CV99 314 aa13.78□□□□□ -0.2
COPB1-210ENST00000533533 TSPY10P0CW01 314 aa13.78□□□□□ -0.2
COPB1-210ENST00000533533 ANKLE2Q86XL3 938 aa13.77□□□□□ -0.21
COPB1-210ENST00000533533 MIA2Q96PC5 1412 aa13.77□□□□□ -0.21
COPB1-210ENST00000533533 CPS1P31327 1500 aa13.76□□□□□ -0.21
COPB1-210ENST00000533533 NLRP1Q9C000 1473 aa13.76□□□□□ -0.21
COPB1-210ENST00000533533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.76□□□□□ -0.213e-9■■□□□ 11.4
COPB1-210ENST00000533533 THEMISQ8N1K5 641 aaPredicted RBP13.76□□□□□ -0.21
COPB1-210ENST00000533533 SHANK2Q9UPX8 1470 aa13.75□□□□□ -0.21
COPB1-210ENST00000533533 UGGT1Q9NYU2 1555 aa13.75□□□□□ -0.21
COPB1-210ENST00000533533 CFAP65Q6ZU64 1925 aaKnown RBP13.74□□□□□ -0.21
COPB1-210ENST00000533533 RNF17Q9BXT8 1623 aaKnown RBP13.74□□□□□ -0.21
COPB1-210ENST00000533533 LRRC9Q6ZRR7 1453 aa13.74□□□□□ -0.21
COPB1-210ENST00000533533 DEPDC5O75140 1603 aa13.73□□□□□ -0.21
COPB1-210ENST00000533533 TOM1O60784 492 aa13.73□□□□□ -0.21
COPB1-210ENST00000533533 MED14O60244 1454 aa13.73□□□□□ -0.21
COPB1-210ENST00000533533 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
COPB1-210ENST00000533533 VWDEQ8N2E2 1590 aa13.72□□□□□ -0.21
COPB1-210ENST00000533533 MAST1Q9Y2H9 1570 aa13.72□□□□□ -0.21
COPB1-210ENST00000533533 ZC3H13Q5T200 1668 aaKnown RBP13.72□□□□□ -0.21
COPB1-210ENST00000533533 NPHP4O75161 1426 aaPredicted RBP13.72□□□□□ -0.21
COPB1-210ENST00000533533 ABCC3O15438 1527 aa13.71□□□□□ -0.21
COPB1-210ENST00000533533 HSPA1LP34931 641 aa13.71□□□□□ -0.21
COPB1-210ENST00000533533 PIP4K2BP78356 416 aa13.71□□□□□ -0.21
COPB1-210ENST00000533533 VPS8Q8N3P4 1428 aa13.71□□□□□ -0.22
COPB1-210ENST00000533533 IQGAP1P46940 1657 aa13.7□□□□□ -0.22
COPB1-210ENST00000533533 EIF2AK4Q9P2K8 1649 aaKnown RBP13.7□□□□□ -0.22
COPB1-210ENST00000533533 KANK4Q5T7N3 995 aaPredicted RBP13.68□□□□□ -0.22
COPB1-210ENST00000533533 MROH1Q8NDA8 1641 aa13.68□□□□□ -0.22
COPB1-210ENST00000533533 ERVK-7P63135 1459 aa13.67□□□□□ -0.22
COPB1-210ENST00000533533 MAP3K1Q13233 1512 aa13.67□□□□□ -0.22
COPB1-210ENST00000533533 STRCP1A6NGW2 1772 aa13.67□□□□□ -0.22
COPB1-210ENST00000533533 CEP152O94986 1710 aa13.67□□□□□ -0.22
COPB1-210ENST00000533533 MYOM3Q5VTT5 1437 aa13.66□□□□□ -0.22
COPB1-210ENST00000533533 ALKQ9UM73 1620 aa13.66□□□□□ -0.22
COPB1-210ENST00000533533 MED1Q15648 1581 aaPredicted RBP13.66□□□□□ -0.22
COPB1-210ENST00000533533 DUOX2Q9NRD8 1548 aa13.65□□□□□ -0.22
COPB1-210ENST00000533533 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
COPB1-210ENST00000533533 LRRC7Q96NW7 1537 aa13.63□□□□□ -0.23
COPB1-210ENST00000533533 SYNMO15061 1565 aa13.62□□□□□ -0.23
COPB1-210ENST00000533533 SCAF11Q99590 1463 aaKnown RBP13.61□□□□□ -0.23
COPB1-210ENST00000533533 KIF15Q9NS87 1388 aa13.61□□□□□ -0.23
COPB1-210ENST00000533533 ARHGAP31Q2M1Z3 1444 aa13.61□□□□□ -0.23
COPB1-210ENST00000533533 PRDM15P57071 1507 aaPredicted RBP13.6□□□□□ -0.23
COPB1-210ENST00000533533 CROCC2H7BZ55 1655 aa13.6□□□□□ -0.23
COPB1-210ENST00000533533 LTKP29376 864 aa13.6□□□□□ -0.23
COPB1-210ENST00000533533 ERBINQ96RT1 1412 aa13.6□□□□□ -0.23
COPB1-210ENST00000533533 ARHGAP23Q9P227 1491 aa13.6□□□□□ -0.23
COPB1-210ENST00000533533 SLIT1O75093 1534 aa13.59□□□□□ -0.23
COPB1-210ENST00000533533 ABCC5O15440 1437 aa13.59□□□□□ -0.23
COPB1-210ENST00000533533 APLP2Q06481 763 aa13.59□□□□□ -0.23
COPB1-210ENST00000533533 TXNDC2Q86VQ3 553 aa13.59□□□□□ -0.23
COPB1-210ENST00000533533 RRP7BPQ9NSQ0 103 aa13.59□□□□□ -0.23
COPB1-210ENST00000533533 PTPN23Q9H3S7 1636 aa13.58□□□□□ -0.24
COPB1-210ENST00000533533 XIRP1Q702N8 1843 aaKnown RBP13.57□□□□□ -0.24
COPB1-210ENST00000533533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.56□□□□□ -0.248e-14■□□□□ 10.5
COPB1-210ENST00000533533 EID1Q9Y6B2 187 aa13.56□□□□□ -0.24
COPB1-210ENST00000533533 PIK3C2BO00750 1634 aa13.56□□□□□ -0.24
COPB1-210ENST00000533533 DAPK1P53355 1430 aa13.56□□□□□ -0.24
COPB1-210ENST00000533533 KANK1Q14678 1352 aa13.55□□□□□ -0.24
COPB1-210ENST00000533533 TMEM2Q9UHN6 1383 aa13.54□□□□□ -0.24
COPB1-210ENST00000533533 KDM5AP29375 1690 aaKnown RBP13.53□□□□□ -0.24
COPB1-210ENST00000533533 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
COPB1-210ENST00000533533 FGD6Q6ZV73 1430 aa13.53□□□□□ -0.24
COPB1-210ENST00000533533 ANKRD30AQ9BXX3 1397 aa13.52□□□□□ -0.25
COPB1-210ENST00000533533 LMTK2Q8IWU2 1503 aa13.52□□□□□ -0.25
COPB1-210ENST00000533533 EFCAB6Q5THR3 1501 aa13.51□□□□□ -0.25
COPB1-210ENST00000533533 IDI1Q13907 227 aa13.51□□□□□ -0.25
COPB1-210ENST00000533533 CHIC2Q9UKJ5 165 aa13.51□□□□□ -0.25
COPB1-210ENST00000533533 TET3O43151 1660 aa13.48□□□□□ -0.25
COPB1-210ENST00000533533 KCNA6P17658 529 aa13.48□□□□□ -0.25
COPB1-210ENST00000533533 NOS1P29475 1434 aa13.47□□□□□ -0.25
COPB1-210ENST00000533533 FAM135BQ49AJ0 1406 aa13.47□□□□□ -0.25
COPB1-210ENST00000533533 TMEM94Q12767 1356 aa13.47□□□□□ -0.25
COPB1-210ENST00000533533 SLC26A8Q96RN1 970 aa13.46□□□□□ -0.25
COPB1-210ENST00000533533 SLC52A1Q9NWF4 448 aa13.46□□□□□ -0.25
COPB1-210ENST00000533533 ADGRB3O60242 1522 aa13.45□□□□□ -0.26
COPB1-210ENST00000533533 ADGRL2O95490 1459 aa13.45□□□□□ -0.26
COPB1-210ENST00000533533 PROSER2Q86WR7 435 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms