RNA–Protein interactions for RNA: ENST00000524040.5

PTK2-254, Transcript of protein tyrosine kinase 2, human

TSL 2

Gene PTK2, Length 475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-254	ENST00000524040	FBXO31	Q5XUX0	539 aa	Predicted RBP	29.41	■■■□□ 2.3
PTK2-254	ENST00000524040	CCDC141	Q6ZP82	1450 aa		29.41	■■■□□ 2.3
PTK2-254	ENST00000524040	SCAF1	Q9H7N4	1312 aa	Known RBP	29.4	■■■□□ 2.3
PTK2-254	ENST00000524040	POLR1A	O95602	1720 aa	Predicted RBP	29.4	■■■□□ 2.3
PTK2-254	ENST00000524040	TNR	Q92752	1358 aa		29.39	■■■□□ 2.3
PTK2-254	ENST00000524040	CAMSAP2	Q08AD1	1489 aa		29.39	■■■□□ 2.3
PTK2-254	ENST00000524040	KDM5D	Q9BY66	1539 aa		29.38	■■■□□ 2.29
PTK2-254	ENST00000524040	WASHC2C	Q9Y4E1	1318 aa		29.38	■■■□□ 2.29
PTK2-254	ENST00000524040	NCOA2	Q15596	1464 aa		29.36	■■■□□ 2.29
PTK2-254	ENST00000524040	PZP	P20742	1482 aa		29.35	■■■□□ 2.29
PTK2-254	ENST00000524040	PIP4K2B	P78356	416 aa		29.32	■■■□□ 2.28
PTK2-254	ENST00000524040	RSPH4A	Q5TD94	716 aa		29.32	■■■□□ 2.28
PTK2-254	ENST00000524040	NEURL4	Q96JN8	1562 aa		29.3	■■■□□ 2.28
PTK2-254	ENST00000524040	FAM135A	Q9P2D6	1515 aa		29.3	■■■□□ 2.28
PTK2-254	ENST00000524040	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	29.29	■■■□□ 2.28	4e-14	■■□□□ 14.2
PTK2-254	ENST00000524040	TSPY4	P0CV99	314 aa		29.29	■■■□□ 2.28
PTK2-254	ENST00000524040	TSPY10	P0CW01	314 aa		29.29	■■■□□ 2.28
PTK2-254	ENST00000524040	ANKLE2	Q86XL3	938 aa		29.29	■■■□□ 2.28
PTK2-254	ENST00000524040	CPS1	P31327	1500 aa		29.27	■■■□□ 2.28
PTK2-254	ENST00000524040	SHANK2	Q9UPX8	1470 aa		29.27	■■■□□ 2.28
PTK2-254	ENST00000524040	TOM1	O60784	492 aa		29.26	■■■□□ 2.27
PTK2-254	ENST00000524040	THEMIS	Q8N1K5	641 aa	Predicted RBP	29.26	■■■□□ 2.27
PTK2-254	ENST00000524040	UGGT1	Q9NYU2	1555 aa		29.25	■■■□□ 2.27
PTK2-254	ENST00000524040	ARHGEF5	Q12774	1597 aa		29.24	■■■□□ 2.27
PTK2-254	ENST00000524040	MIA2	Q96PC5	1412 aa		29.24	■■■□□ 2.27
PTK2-254	ENST00000524040	HSPA1L	P34931	641 aa		29.23	■■■□□ 2.27
PTK2-254	ENST00000524040	NLRP1	Q9C000	1473 aa		29.23	■■■□□ 2.27
PTK2-254	ENST00000524040	NPHP4	O75161	1426 aa	Predicted RBP	29.19	■■■□□ 2.26
PTK2-254	ENST00000524040	VWDE	Q8N2E2	1590 aa		29.17	■■■□□ 2.26
PTK2-254	ENST00000524040	DEPDC5	O75140	1603 aa		29.15	■■■□□ 2.26
PTK2-254	ENST00000524040	RNF17	Q9BXT8	1623 aa	Known RBP	29.14	■■■□□ 2.26
PTK2-254	ENST00000524040	IQGAP1	P46940	1657 aa		29.14	■■■□□ 2.26
PTK2-254	ENST00000524040	MED1	Q15648	1581 aa	Predicted RBP	29.13	■■■□□ 2.25
PTK2-254	ENST00000524040	ZC3H13	Q5T200	1668 aa	Known RBP	29.13	■■■□□ 2.25
PTK2-254	ENST00000524040	MED14	O60244	1454 aa		29.12	■■■□□ 2.25
PTK2-254	ENST00000524040	LRRC9	Q6ZRR7	1453 aa		29.12	■■■□□ 2.25
PTK2-254	ENST00000524040	ABCC3	O15438	1527 aa		29.12	■■■□□ 2.25
PTK2-254	ENST00000524040	SENP3	Q9H4L4	574 aa	Predicted RBP	29.1	■■■□□ 2.25
PTK2-254	ENST00000524040	MAST1	Q9Y2H9	1570 aa		29.09	■■■□□ 2.25
PTK2-254	ENST00000524040	EIF2AK4	Q9P2K8	1649 aa	Known RBP	29.08	■■■□□ 2.25
PTK2-254	ENST00000524040	CFAP65	Q6ZU64	1925 aa	Known RBP	29.08	■■■□□ 2.25
PTK2-254	ENST00000524040	CEP152	O94986	1710 aa		29.07	■■■□□ 2.24
PTK2-254	ENST00000524040	VPS8	Q8N3P4	1428 aa		29.07	■■■□□ 2.24
PTK2-254	ENST00000524040	ERVK-7	P63135	1459 aa		29.06	■■■□□ 2.24
PTK2-254	ENST00000524040	PHF23	Q9BUL5	403 aa	Predicted RBP	29.03	■■■□□ 2.24
PTK2-254	ENST00000524040	STRCP1	A6NGW2	1772 aa		29.03	■■■□□ 2.24
PTK2-254	ENST00000524040	KANK4	Q5T7N3	995 aa	Predicted RBP	29.02	■■■□□ 2.24
PTK2-254	ENST00000524040	MROH1	Q8NDA8	1641 aa		29.02	■■■□□ 2.24
PTK2-254	ENST00000524040	ALK	Q9UM73	1620 aa		29	■■■□□ 2.23
PTK2-254	ENST00000524040	LOC105371045	A0A1W2PR82	267 aa		28.99	■■■□□ 2.23
PTK2-254	ENST00000524040	MYOM3	Q5VTT5	1437 aa		28.99	■■■□□ 2.23
PTK2-254	ENST00000524040	UBR1	Q8IWV7	1749 aa		28.99	■■■□□ 2.23
PTK2-254	ENST00000524040	LRRC7	Q96NW7	1537 aa		28.99	■■■□□ 2.23
PTK2-254	ENST00000524040	DUOX2	Q9NRD8	1548 aa		28.98	■■■□□ 2.23
PTK2-254	ENST00000524040	SYNM	O15061	1565 aa		28.97	■■■□□ 2.23
PTK2-254	ENST00000524040	SCAF11	Q99590	1463 aa	Known RBP	28.94	■■■□□ 2.22
PTK2-254	ENST00000524040	TXNDC2	Q86VQ3	553 aa		28.92	■■■□□ 2.22
PTK2-254	ENST00000524040	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	28.92	■■■□□ 2.22
PTK2-254	ENST00000524040	KIF15	Q9NS87	1388 aa		28.91	■■■□□ 2.22
PTK2-254	ENST00000524040	MAP3K1	Q13233	1512 aa		28.91	■■■□□ 2.22
PTK2-254	ENST00000524040	RRP7BP	Q9NSQ0	103 aa		28.91	■■■□□ 2.22
PTK2-254	ENST00000524040	LTK	P29376	864 aa		28.89	■■■□□ 2.22
PTK2-254	ENST00000524040	EID1	Q9Y6B2	187 aa		28.88	■■■□□ 2.21
PTK2-254	ENST00000524040	CROCC2	H7BZ55	1655 aa		28.87	■■■□□ 2.21
PTK2-254	ENST00000524040	PRDM15	P57071	1507 aa	Predicted RBP	28.87	■■■□□ 2.21
PTK2-254	ENST00000524040	STAG3	Q9UJ98	1225 aa		28.86	■■■□□ 2.21
PTK2-254	ENST00000524040	ERBIN	Q96RT1	1412 aa		28.86	■■■□□ 2.21
PTK2-254	ENST00000524040	SLIT1	O75093	1534 aa		28.84	■■■□□ 2.21
PTK2-254	ENST00000524040	ARHGAP23	Q9P227	1491 aa		28.84	■■■□□ 2.21
PTK2-254	ENST00000524040	PIK3C2B	O00750	1634 aa		28.83	■■■□□ 2.21
PTK2-254	ENST00000524040	PTPN23	Q9H3S7	1636 aa		28.83	■■■□□ 2.21
PTK2-254	ENST00000524040	APLP2	Q06481	763 aa		28.83	■■■□□ 2.21
PTK2-254	ENST00000524040	ABCC5	O15440	1437 aa		28.83	■■■□□ 2.21
PTK2-254	ENST00000524040	ARHGAP31	Q2M1Z3	1444 aa		28.83	■■■□□ 2.21
PTK2-254	ENST00000524040	KANK1	Q14678	1352 aa		28.82	■■■□□ 2.2
PTK2-254	ENST00000524040	XIRP1	Q702N8	1843 aa	Known RBP	28.78	■■■□□ 2.2
PTK2-254	ENST00000524040	DAPK1	P53355	1430 aa		28.77	■■■□□ 2.2
PTK2-254	ENST00000524040	CHIC2	Q9UKJ5	165 aa		28.77	■■■□□ 2.2
PTK2-254	ENST00000524040	TMEM2	Q9UHN6	1383 aa		28.75	■■■□□ 2.19
PTK2-254	ENST00000524040	EFCAB6	Q5THR3	1501 aa		28.73	■■■□□ 2.19
PTK2-254	ENST00000524040	IDI1	Q13907	227 aa		28.7	■■■□□ 2.18
PTK2-254	ENST00000524040	ANKRD30A	Q9BXX3	1397 aa		28.7	■■■□□ 2.18
PTK2-254	ENST00000524040	FGD6	Q6ZV73	1430 aa		28.69	■■■□□ 2.18
PTK2-254	ENST00000524040	SLC26A8	Q96RN1	970 aa		28.68	■■■□□ 2.18
PTK2-254	ENST00000524040	TMEM94	Q12767	1356 aa		28.67	■■■□□ 2.18
PTK2-254	ENST00000524040	BCAN	Q96GW7	911 aa		28.67	■■■□□ 2.18
PTK2-254	ENST00000524040	KDM5A	P29375	1690 aa	Known RBP	28.67	■■■□□ 2.18
PTK2-254	ENST00000524040	RBM33	Q96EV2	1170 aa	Known RBP	28.66	■■■□□ 2.18
PTK2-254	ENST00000524040	LMTK2	Q8IWU2	1503 aa		28.65	■■■□□ 2.18
PTK2-254	ENST00000524040	PROSER2	Q86WR7	435 aa	Predicted RBP	28.65	■■■□□ 2.18
PTK2-254	ENST00000524040	KCNA6	P17658	529 aa		28.64	■■■□□ 2.18
PTK2-254	ENST00000524040	FAM135B	Q49AJ0	1406 aa		28.62	■■■□□ 2.17
PTK2-254	ENST00000524040	RGS17	Q9UGC6	210 aa	Predicted RBP	28.62	■■■□□ 2.17
PTK2-254	ENST00000524040	ADGRB3	O60242	1522 aa		28.61	■■■□□ 2.17
PTK2-254	ENST00000524040	ROBO1	Q9Y6N7	1651 aa		28.6	■■■□□ 2.17
PTK2-254	ENST00000524040	TET3	O43151	1660 aa		28.59	■■■□□ 2.17
PTK2-254	ENST00000524040	NOS1	P29475	1434 aa		28.57	■■■□□ 2.16
PTK2-254	ENST00000524040	FAM50A	Q14320	339 aa	Known RBP	28.55	■■■□□ 2.16
PTK2-254	ENST00000524040	SLC52A1	Q9NWF4	448 aa		28.55	■■■□□ 2.16
PTK2-254	ENST00000524040	NKTR	P30414	1462 aa	Known RBP	28.53	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms