RNA–Protein interactions for RNA: ENST00000524040.5

PTK2-254, Transcript of protein tyrosine kinase 2, humanhuman

TSL 2

Gene PTK2, Length 475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-254ENST00000524040 NISCHQ9Y2I1 1504 aa46.3■■■■■ 5
PTK2-254ENST00000524040 ABCC9O60706 1549 aa42.1■■■■■ 4.33
PTK2-254ENST00000524040 CCDC180Q9P1Z9 1646 aa41.69■■■■■ 4.27
PTK2-254ENST00000524040 RB1CC1Q8TDY2 1594 aa39.88■■■■□ 3.97
PTK2-254ENST00000524040 DNAJC5BQ9UF47 199 aa39.7■■■■□ 3.95
PTK2-254ENST00000524040 NACADO15069 1562 aa39.48■■■■□ 3.91
PTK2-254ENST00000524040 DCAF8L2P0C7V8 631 aa39.42■■■■□ 3.9
PTK2-254ENST00000524040 PABPN1Q86U42 306 aaKnown RBP eCLIP39.15■■■■□ 3.86
PTK2-254ENST00000524040 UNC13AQ9UPW8 1703 aa38.99■■■■□ 3.83
PTK2-254ENST00000524040 MYO15BQ96JP2 1530 aa38.73■■■■□ 3.79
PTK2-254ENST00000524040 BICRAQ9NZM4 1560 aa38.68■■■■□ 3.78
PTK2-254ENST00000524040 ZCCHC6Q5VYS8 1495 aaKnown RBP38.29■■■■□ 3.72
PTK2-254ENST00000524040 DCAF1Q9Y4B6 1507 aa38.15■■■■□ 3.7
PTK2-254ENST00000524040 SCRIBQ14160 1630 aa38.07■■■■□ 3.68
PTK2-254ENST00000524040 SHROOM4Q9ULL8 1493 aa38.07■■■■□ 3.68
PTK2-254ENST00000524040 CC2D2AQ9P2K1 1620 aa37.98■■■■□ 3.67
PTK2-254ENST00000524040 CECR2Q9BXF3 1484 aa37.91■■■■□ 3.66
PTK2-254ENST00000524040 EIF4G1Q04637 1599 aaKnown RBP37.79■■■■□ 3.64
PTK2-254ENST00000524040 DNAJC5Q9H3Z4 198 aa36.68■■■■□ 3.46
PTK2-254ENST00000524040 NCAPD3P42695 1498 aa36.42■■■■□ 3.42
PTK2-254ENST00000524040 ERCC6Q03468 1493 aa36.4■■■■□ 3.42
PTK2-254ENST00000524040 CUX2O14529 1486 aa36.33■■■■□ 3.41
PTK2-254ENST00000524040 ATAD2BQ9ULI0 1458 aa36.31■■■■□ 3.4
PTK2-254ENST00000524040 SMARCA4P51532 1647 aa36.22■■■■□ 3.39
PTK2-254ENST00000524040 SMARCA2P51531 1590 aa36.2■■■■□ 3.39
PTK2-254ENST00000524040 HMGXB3Q12766 1538 aa36.14■■■■□ 3.38
PTK2-254ENST00000524040 NESP48681 1621 aa36.05■■■■□ 3.36
PTK2-254ENST00000524040 BAZ1BQ9UIG0 1483 aaKnown RBP35.99■■■■□ 3.35
PTK2-254ENST00000524040 BAZ1AQ9NRL2 1556 aaPredicted RBP35.98■■■■□ 3.35
PTK2-254ENST00000524040 PEG3Q9GZU2 1588 aa35.79■■■■□ 3.32
PTK2-254ENST00000524040 THOC2Q8NI27 1593 aaKnown RBP35.71■■■■□ 3.31
PTK2-254ENST00000524040 LAMC3Q9Y6N6 1575 aa35.71■■■■□ 3.31
PTK2-254ENST00000524040 MROH2BQ7Z745 1585 aa35.7■■■■□ 3.31
PTK2-254ENST00000524040 KIF21AQ7Z4S6 1674 aa35.6■■■■□ 3.29
PTK2-254ENST00000524040 PDS5BQ9NTI5 1447 aa35.52■■■■□ 3.28
PTK2-254ENST00000524040 CADPSQ9ULU8 1353 aa35.34■■■■□ 3.25
PTK2-254ENST00000524040 WIZO95785 1651 aa35.3■■■■□ 3.24
PTK2-254ENST00000524040 MRC2Q9UBG0 1479 aa35.24■■■■□ 3.23
PTK2-254ENST00000524040 WDR62O43379 1518 aa35.13■■■■□ 3.21
PTK2-254ENST00000524040 TRIM41Q8WV44 630 aa35.11■■■■□ 3.21
PTK2-254ENST00000524040 CEP164Q9UPV0 1460 aa35.06■■■■□ 3.2
PTK2-254ENST00000524040 FANCD2Q9BXW9 1451 aa34.98■■■■□ 3.19
PTK2-254ENST00000524040 CFTRP13569 1480 aa34.85■■■■□ 3.17
PTK2-254ENST00000524040 RSF1Q96T23 1441 aaPredicted RBP34.81■■■■□ 3.16
PTK2-254ENST00000524040 TOP2AP11388 1531 aaKnown RBP34.78■■■■□ 3.16
PTK2-254ENST00000524040 URB2Q14146 1524 aaKnown RBP34.69■■■■□ 3.14
PTK2-254ENST00000524040 OSCARQ8IYS5 282 aa34.67■■■■□ 3.14
PTK2-254ENST00000524040 PRDM2Q13029 1718 aa34.54■■■■□ 3.12
PTK2-254ENST00000524040 CCDC88BA6NC98 1476 aa34.4■■■■□ 3.1
PTK2-254ENST00000524040 IFT140Q96RY7 1462 aa34.33■■■■□ 3.09
PTK2-254ENST00000524040 ZNF608Q9ULD9 1512 aaPredicted RBP34.33■■■■□ 3.09
PTK2-254ENST00000524040 TOPBP1Q92547 1522 aa34.27■■■■□ 3.08
PTK2-254ENST00000524040 RIMBP3CA6NJZ7 1639 aa34.26■■■■□ 3.08
PTK2-254ENST00000524040 RIMBP3BA6NNM3 1639 aa34.26■■■■□ 3.08
PTK2-254ENST00000524040 RIMBP3Q9UFD9 1639 aa34.26■■■■□ 3.08
PTK2-254ENST00000524040 EIF4G3O43432 1585 aaKnown RBP34.15■■■■□ 3.06
PTK2-254ENST00000524040 ABCC8Q09428 1581 aa34.15■■■■□ 3.06
PTK2-254ENST00000524040 DNMBPQ6XZF7 1577 aa34.11■■■■□ 3.05
PTK2-254ENST00000524040 ARHGEF11O15085 1522 aa34.1■■■■□ 3.05
PTK2-254ENST00000524040 AQRO60306 1485 aaKnown RBP eCLIP34■■■■□ 3.033e-6■■■■□ 24.7
PTK2-254ENST00000524040 CHD1O14646 1710 aa33.99■■■■□ 3.03
PTK2-254ENST00000524040 TARBP1Q13395 1621 aaKnown RBP33.97■■■■□ 3.03
PTK2-254ENST00000524040 FBLN2P98095 1184 aa33.95■■■■□ 3.03
PTK2-254ENST00000524040 CYB5RLQ6IPT4 315 aa33.93■■■■□ 3.02
PTK2-254ENST00000524040 POLA1P09884 1462 aaPredicted RBP33.89■■■■□ 3.02
PTK2-254ENST00000524040 RAD54L2Q9Y4B4 1467 aa33.82■■■■□ 3
PTK2-254ENST00000524040 SOGA1O94964 1423 aa33.76■■■□□ 2.99
PTK2-254ENST00000524040 TDRD9Q8NDG6 1382 aaKnown RBP33.75■■■□□ 2.99
PTK2-254ENST00000524040 ARAP1Q96P48 1450 aa33.74■■■□□ 2.99
PTK2-254ENST00000524040 TRHP20396 242 aaPredicted RBP33.73■■■□□ 2.99
PTK2-254ENST00000524040 FGD5Q6ZNL6 1462 aa33.66■■■□□ 2.98
PTK2-254ENST00000524040 SNAPC4Q5SXM2 1469 aa33.65■■■□□ 2.98
PTK2-254ENST00000524040 CHMP7Q8WUX9 453 aaPredicted RBP33.58■■■□□ 2.97
PTK2-254ENST00000524040 WDR97A6NE52 1622 aa33.57■■■□□ 2.96
PTK2-254ENST00000524040 CUX1P39880 1505 aa33.56■■■□□ 2.96
PTK2-254ENST00000524040 SYNJ1O43426 1573 aa33.51■■■□□ 2.96
PTK2-254ENST00000524040 MAGI1Q96QZ7 1491 aaPredicted RBP33.5■■■□□ 2.95
PTK2-254ENST00000524040 CLASP1Q7Z460 1538 aa33.5■■■□□ 2.95
PTK2-254ENST00000524040 GRIN2BQ13224 1484 aa33.49■■■□□ 2.95
PTK2-254ENST00000524040 SYNJ2O15056 1496 aa33.41■■■□□ 2.94
PTK2-254ENST00000524040 PBRM1Q86U86 1689 aa33.39■■■□□ 2.94
PTK2-254ENST00000524040 GAPVD1Q14C86 1478 aa33.34■■■□□ 2.93
PTK2-254ENST00000524040 SUPT5HO00267 1087 aaKnown RBP33.21■■■□□ 2.91
PTK2-254ENST00000524040 ABCA10Q8WWZ4 1543 aa33.21■■■□□ 2.91
PTK2-254ENST00000524040 ABCA5Q8WWZ7 1642 aa33.2■■■□□ 2.91
PTK2-254ENST00000524040 GRIN2AQ12879 1464 aa33.05■■■□□ 2.88
PTK2-254ENST00000524040 WRNQ14191 1432 aaPredicted RBP eCLIP33.05■■■□□ 2.88
PTK2-254ENST00000524040 ADAMTS12P58397 1594 aa33■■■□□ 2.87
PTK2-254ENST00000524040 ERCC6L2Q5T890 1561 aa33■■■□□ 2.87
PTK2-254ENST00000524040 AEBP2Q6ZN18 517 aaPredicted RBP33■■■□□ 2.87
PTK2-254ENST00000524040 CEP170Q5SW79 1584 aa32.96■■■□□ 2.87
PTK2-254ENST00000524040 BIVM-ERCC5R4GMW8 1640 aa32.94■■■□□ 2.86
PTK2-254ENST00000524040 TOP2BQ02880 1626 aa32.93■■■□□ 2.86
PTK2-254ENST00000524040 NUP160Q12769 1436 aa32.91■■■□□ 2.86
PTK2-254ENST00000524040 FHAD1B1AJZ9 1412 aa32.88■■■□□ 2.85
PTK2-254ENST00000524040 SHROOM2Q13796 1616 aa32.81■■■□□ 2.84
PTK2-254ENST00000524040 ERICH3Q5RHP9 1530 aa32.8■■■□□ 2.84
PTK2-254ENST00000524040 PRG4Q92954 1404 aaPredicted RBP32.69■■■□□ 2.82
PTK2-254ENST00000524040 JPH4Q96JJ6 628 aa32.63■■■□□ 2.81
PTK2-254ENST00000524040 KIF13AQ9H1H9 1805 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms