RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 FER1L4A9Z1Z3 1794 aa6.52□□□□□ -1.37
PVT1-211ENST00000521600 TPRNQ4KMQ1 711 aa6.51□□□□□ -1.37
PVT1-211ENST00000521600 PHF8Q9UPP1 1060 aa6.51□□□□□ -1.37
PVT1-211ENST00000521600 PREX1Q8TCU6 1659 aa6.51□□□□□ -1.37
PVT1-211ENST00000521600 C19orf67A6NJJ6 358 aa6.5□□□□□ -1.37
PVT1-211ENST00000521600 SOX12O15370 315 aa6.5□□□□□ -1.37
PVT1-211ENST00000521600 RICTORQ6R327 1708 aa6.5□□□□□ -1.37
PVT1-211ENST00000521600 ARHGEF40Q8TER5 1519 aa6.5□□□□□ -1.37
PVT1-211ENST00000521600 PPP1R37O75864 691 aa6.49□□□□□ -1.37
PVT1-211ENST00000521600 NLRP6P59044 892 aa6.49□□□□□ -1.37
PVT1-211ENST00000521600 MS4A3Q96HJ5 214 aa6.49□□□□□ -1.37
PVT1-211ENST00000521600 TRPC6Q9Y210 931 aa6.49□□□□□ -1.37
PVT1-211ENST00000521600 UGGT2Q9NYU1 1516 aa6.49□□□□□ -1.37
PVT1-211ENST00000521600 ABCA9Q8IUA7 1624 aa6.48□□□□□ -1.37
PVT1-211ENST00000521600 LTBP4Q8N2S1 1624 aa6.48□□□□□ -1.37
PVT1-211ENST00000521600 FBXO22Q8NEZ5 403 aa6.48□□□□□ -1.37
PVT1-211ENST00000521600 TMEM106CQ9BVX2 250 aa6.48□□□□□ -1.37
PVT1-211ENST00000521600 ABCA8O94911 1581 aa6.48□□□□□ -1.37
PVT1-211ENST00000521600 TTC37Q6PGP7 1564 aa6.48□□□□□ -1.37
PVT1-211ENST00000521600 RAPGEF3O95398 923 aa6.47□□□□□ -1.37
PVT1-211ENST00000521600 GOLGA2Q08379 1002 aa6.47□□□□□ -1.37
PVT1-211ENST00000521600 KCNH8Q96L42 1107 aa6.47□□□□□ -1.37
PVT1-211ENST00000521600 WDR70Q9NW82 654 aa6.47□□□□□ -1.37
PVT1-211ENST00000521600 MED1Q15648 1581 aaPredicted RBP6.45□□□□□ -1.38
PVT1-211ENST00000521600 CTTNBP2Q8WZ74 1663 aa6.45□□□□□ -1.38
PVT1-211ENST00000521600 ARID4BQ4LE39 1312 aaPredicted RBP6.45□□□□□ -1.38
PVT1-211ENST00000521600 CARMIL1Q5VZK9 1371 aa6.44□□□□□ -1.38
PVT1-211ENST00000521600 SETD1BQ9UPS6 1966 aaKnown RBP6.44□□□□□ -1.38
PVT1-211ENST00000521600 P3H3Q8IVL6 736 aa6.44□□□□□ -1.38
PVT1-211ENST00000521600 KIF27Q86VH2 1401 aa6.43□□□□□ -1.38
PVT1-211ENST00000521600 YEATS2Q9ULM3 1422 aa6.43□□□□□ -1.38
PVT1-211ENST00000521600 MKRN3Q13064 507 aaKnown RBP6.43□□□□□ -1.38
PVT1-211ENST00000521600 MS4A4AQ96JQ5 239 aa6.43□□□□□ -1.38
PVT1-211ENST00000521600 IQSEC2Q5JU85 1478 aa6.42□□□□□ -1.38
PVT1-211ENST00000521600 NEO1Q92859 1461 aa6.42□□□□□ -1.38
PVT1-211ENST00000521600 TIE1P35590 1138 aa6.42□□□□□ -1.38
PVT1-211ENST00000521600 KCNV2Q8TDN2 545 aa6.42□□□□□ -1.38
PVT1-211ENST00000521600 TTLL13PA6NNM8 815 aa6.41□□□□□ -1.38
PVT1-211ENST00000521600 HAX1O00165 279 aa6.41□□□□□ -1.38
PVT1-211ENST00000521600 GALR2O43603 387 aaPredicted RBP6.41□□□□□ -1.38
PVT1-211ENST00000521600 FANCAO15360 1455 aa6.41□□□□□ -1.38
PVT1-211ENST00000521600 ZMYM4Q5VZL5 1548 aa6.4□□□□□ -1.38
PVT1-211ENST00000521600 ARHGEF12Q9NZN5 1544 aa6.4□□□□□ -1.38
PVT1-211ENST00000521600 BMP2KQ9NSY1 1161 aaPredicted RBP6.4□□□□□ -1.38
PVT1-211ENST00000521600 PHLDB1Q86UU1 1377 aa6.4□□□□□ -1.39
PVT1-211ENST00000521600 PTPRTO14522 1441 aa6.4□□□□□ -1.39
PVT1-211ENST00000521600 ZFYVE16Q7Z3T8 1539 aa6.4□□□□□ -1.39
PVT1-211ENST00000521600 C3P01024 1663 aa6.39□□□□□ -1.39
PVT1-211ENST00000521600 EVX2Q03828 476 aa6.39□□□□□ -1.39
PVT1-211ENST00000521600 ATP10BO94823 1461 aa6.39□□□□□ -1.39
PVT1-211ENST00000521600 CEBPAP49715 358 aaPredicted RBP6.38□□□□□ -1.39
PVT1-211ENST00000521600 TRIM35Q9UPQ4 493 aa6.38□□□□□ -1.39
PVT1-211ENST00000521600 NCKAP5LQ9HCH0 1330 aa6.38□□□□□ -1.39
PVT1-211ENST00000521600 EFCAB5A4FU69 1503 aa6.38□□□□□ -1.39
PVT1-211ENST00000521600 HECW1Q76N89 1606 aa6.38□□□□□ -1.39
PVT1-211ENST00000521600 DENND4BO75064 1496 aaPredicted RBP6.37□□□□□ -1.39
PVT1-211ENST00000521600 FHOD3Q2V2M9 1422 aa6.37□□□□□ -1.39
PVT1-211ENST00000521600 POGZQ7Z3K3 1410 aa6.37□□□□□ -1.39
PVT1-211ENST00000521600 AKNAQ7Z591 1439 aa6.37□□□□□ -1.39
PVT1-211ENST00000521600 ARID3CA6NKF2 412 aa6.37□□□□□ -1.39
PVT1-211ENST00000521600 MLECQ14165 292 aa6.37□□□□□ -1.39
PVT1-211ENST00000521600 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.37□□□□□ -1.391e-6■■□□□ 13.6
PVT1-211ENST00000521600 UHRF1BP1Q6BDS2 1440 aa6.36□□□□□ -1.39
PVT1-211ENST00000521600 PDE4AP27815 886 aa6.36□□□□□ -1.39
PVT1-211ENST00000521600 E2F4Q16254 413 aa6.36□□□□□ -1.39
PVT1-211ENST00000521600 LARP6Q9BRS8 491 aaKnown RBP6.36□□□□□ -1.39
PVT1-211ENST00000521600 CFAP74Q9C0B2 1584 aa6.35□□□□□ -1.39
PVT1-211ENST00000521600 RAPGEF2Q9Y4G8 1499 aa6.35□□□□□ -1.39
PVT1-211ENST00000521600 NCOA1Q15788 1441 aa6.34□□□□□ -1.39
PVT1-211ENST00000521600 SUPT6HQ7KZ85 1726 aaKnown RBP6.34□□□□□ -1.39
PVT1-211ENST00000521600 ARHGEF1Q92888 912 aaKnown RBP6.34□□□□□ -1.39
PVT1-211ENST00000521600 RAPGEF6Q8TEU7 1601 aa6.34□□□□□ -1.39
PVT1-211ENST00000521600 SRCAPQ6ZRS2 3230 aa6.34□□□□□ -1.39
PVT1-211ENST00000521600 CAMSAP1Q5T5Y3 1602 aa6.33□□□□□ -1.4
PVT1-211ENST00000521600 UBAP1LF5GYI3 381 aa6.33□□□□□ -1.4
PVT1-211ENST00000521600 HSPA1LP34931 641 aa6.33□□□□□ -1.4
PVT1-211ENST00000521600 CLCN6P51797 869 aa6.33□□□□□ -1.4
PVT1-211ENST00000521600 ATN1P54259 1190 aaPredicted RBP6.33□□□□□ -1.4
PVT1-211ENST00000521600 MFSD10Q14728 455 aa6.33□□□□□ -1.4
PVT1-211ENST00000521600 DDX27Q96GQ7 796 aaKnown RBP6.33□□□□□ -1.4
PVT1-211ENST00000521600 CRISPLD2Q9H0B8 497 aa6.33□□□□□ -1.4
PVT1-211ENST00000521600 GOLGA3Q08378 1498 aa6.33□□□□□ -1.4
PVT1-211ENST00000521600 SETD1AO15047 1707 aaKnown RBP6.33□□□□□ -1.4
PVT1-211ENST00000521600 ALKQ9UM73 1620 aa6.32□□□□□ -1.4
PVT1-211ENST00000521600 ZNF335Q9H4Z2 1342 aaPredicted RBP6.32□□□□□ -1.4
PVT1-211ENST00000521600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.32□□□□□ -1.4
PVT1-211ENST00000521600 DPY19L2Q6NUT2 758 aa6.32□□□□□ -1.4
PVT1-211ENST00000521600 MAGI2Q86UL8 1455 aa6.32□□□□□ -1.4
PVT1-211ENST00000521600 C9orf84Q5VXU9 1444 aa6.31□□□□□ -1.4
PVT1-211ENST00000521600 ATP10AO60312 1499 aa6.3□□□□□ -1.4
PVT1-211ENST00000521600 ATMINO43313 823 aaPredicted RBP6.3□□□□□ -1.4
PVT1-211ENST00000521600 LMOD2Q6P5Q4 547 aa6.3□□□□□ -1.4
PVT1-211ENST00000521600 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.3□□□□□ -1.4
PVT1-211ENST00000521600 ZNF142P52746 1687 aaPredicted RBP6.3□□□□□ -1.4
PVT1-211ENST00000521600 NUP153P49790 1475 aaKnown RBP6.29□□□□□ -1.4
PVT1-211ENST00000521600 ABCA6Q8N139 1617 aa6.29□□□□□ -1.4
PVT1-211ENST00000521600 SEMA3EO15041 775 aa6.29□□□□□ -1.4
PVT1-211ENST00000521600 SAMD9Q5K651 1589 aa6.29□□□□□ -1.4
PVT1-211ENST00000521600 PDCD7Q8N8D1 485 aaKnown RBP6.29□□□□□ -1.4
PVT1-211ENST00000521600 DIP2CQ9Y2E4 1556 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms