RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 AEBP2Q6ZN18 517 aaPredicted RBP12.66□□□□□ -0.38
PVT1-211ENST00000521600 CHIC1Q5VXU3 224 aa12.61□□□□□ -0.39
PVT1-211ENST00000521600 PHF23Q9BUL5 403 aaPredicted RBP11.13□□□□□ -0.63
PVT1-211ENST00000521600 SENP3Q9H4L4 574 aaPredicted RBP10.67□□□□□ -0.7
PVT1-211ENST00000521600 PLPPR3Q6T4P5 718 aa10.35□□□□□ -0.75
PVT1-211ENST00000521600 FOXD1Q16676 465 aa9.9□□□□□ -0.82
PVT1-211ENST00000521600 ADRA2BP18089 450 aa9.75□□□□□ -0.85
PVT1-211ENST00000521600 PPP6R1Q9UPN7 881 aa9.74□□□□□ -0.85
PVT1-211ENST00000521600 NISCHQ9Y2I1 1504 aa9.46□□□□□ -0.9
PVT1-211ENST00000521600 PIAS4Q8N2W9 510 aaPredicted RBP9.42□□□□□ -0.9
PVT1-211ENST00000521600 KCNA4P22459 653 aa9.26□□□□□ -0.93
PVT1-211ENST00000521600 PPP4R3CPQ6ZMV5 832 aa9.18□□□□□ -0.94
PVT1-211ENST00000521600 ABCC9O60706 1549 aa9.05□□□□□ -0.96
PVT1-211ENST00000521600 MSH5O43196 834 aa9□□□□□ -0.97
PVT1-211ENST00000521600 NCBP3Q53F19 620 aaKnown RBP8.98□□□□□ -0.97
PVT1-211ENST00000521600 EHMT2Q96KQ7 1210 aa8.94□□□□□ -0.98
PVT1-211ENST00000521600 SCAF1Q9H7N4 1312 aaKnown RBP8.88□□□□□ -0.99
PVT1-211ENST00000521600 NPM3O75607 178 aaKnown RBP8.87□□□□□ -0.99
PVT1-211ENST00000521600 SLC4A1APQ9BWU0 796 aaKnown RBP8.86□□□□□ -0.99
PVT1-211ENST00000521600 DNAJC5BQ9UF47 199 aa8.85□□□□□ -0.99
PVT1-211ENST00000521600 CNKSR2Q8WXI2 1034 aa8.84□□□□□ -0.99
PVT1-211ENST00000521600 MAPK8IP2Q13387 824 aaPredicted RBP8.78□□□□□ -1
PVT1-211ENST00000521600 CCDC180Q9P1Z9 1646 aa8.7□□□□□ -1.02
PVT1-211ENST00000521600 CSRNP3Q8WYN3 585 aa8.69□□□□□ -1.02
PVT1-211ENST00000521600 RNF216Q9NWF9 866 aaPredicted RBP8.59□□□□□ -1.03
PVT1-211ENST00000521600 DMRT2Q9Y5R5 561 aa8.56□□□□□ -1.04
PVT1-211ENST00000521600 ZBTB22O15209 634 aa8.52□□□□□ -1.05
PVT1-211ENST00000521600 HOXD11P31277 338 aaPredicted RBP8.49□□□□□ -1.05
PVT1-211ENST00000521600 FOXD4L1Q9NU39 408 aa8.43□□□□□ -1.06
PVT1-211ENST00000521600 RB1CC1Q8TDY2 1594 aa8.42□□□□□ -1.06
PVT1-211ENST00000521600 UNC13AQ9UPW8 1703 aa8.41□□□□□ -1.06
PVT1-211ENST00000521600 DNAJC5Q9H3Z4 198 aa8.35□□□□□ -1.07
PVT1-211ENST00000521600 PABPN1Q86U42 306 aaKnown RBP eCLIP8.33□□□□□ -1.08
PVT1-211ENST00000521600 SLC4A2P04920 1241 aa8.31□□□□□ -1.08
PVT1-211ENST00000521600 BICRAQ9NZM4 1560 aa8.27□□□□□ -1.09
PVT1-211ENST00000521600 NACADO15069 1562 aa8.26□□□□□ -1.09
PVT1-211ENST00000521600 DCAF8L1A6NGE4 600 aa8.23□□□□□ -1.09
PVT1-211ENST00000521600 CC2D2AQ9P2K1 1620 aa8.19□□□□□ -1.1
PVT1-211ENST00000521600 MYCNP04198 464 aaPredicted RBP8.19□□□□□ -1.1
PVT1-211ENST00000521600 CECR2Q9BXF3 1484 aa8.17□□□□□ -1.1
PVT1-211ENST00000521600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.11□□□□□ -1.112e-7■□□□□ 9.9
PVT1-211ENST00000521600 ATXN8OSP0DMR3 200 aa8.08□□□□□ -1.12
PVT1-211ENST00000521600 EIF4G1Q04637 1599 aaKnown RBP8.06□□□□□ -1.12
PVT1-211ENST00000521600 DCAF8L2P0C7V8 631 aa8.05□□□□□ -1.12
PVT1-211ENST00000521600 U3KPZ7 1027 aaPredicted RBP8.01□□□□□ -1.13
PVT1-211ENST00000521600 SHROOM4Q9ULL8 1493 aa8□□□□□ -1.13
PVT1-211ENST00000521600 MYO15BQ96JP2 1530 aa8□□□□□ -1.13
PVT1-211ENST00000521600 ATF5Q9Y2D1 282 aaPredicted RBP7.97□□□□□ -1.13
PVT1-211ENST00000521600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.96□□□□□ -1.14
PVT1-211ENST00000521600 HNRNPUL2Q1KMD3 747 aaKnown RBP7.96□□□□□ -1.14
PVT1-211ENST00000521600 SAMD1Q6SPF0 538 aaPredicted RBP7.95□□□□□ -1.14
PVT1-211ENST00000521600 CUX2O14529 1486 aa7.93□□□□□ -1.14
PVT1-211ENST00000521600 SCRIBQ14160 1630 aa7.91□□□□□ -1.14
PVT1-211ENST00000521600 FKBP8Q14318 412 aa7.85□□□□□ -1.15
PVT1-211ENST00000521600 APLP2Q06481 763 aa7.82□□□□□ -1.16
PVT1-211ENST00000521600 TRIM41Q8WV44 630 aa7.82□□□□□ -1.16
PVT1-211ENST00000521600 ZNF219Q9P2Y4 722 aaPredicted RBP7.79□□□□□ -1.16
PVT1-211ENST00000521600 ERCC6Q03468 1493 aa7.79□□□□□ -1.16
PVT1-211ENST00000521600 DCAF1Q9Y4B6 1507 aa7.77□□□□□ -1.17
PVT1-211ENST00000521600 ZCCHC6Q5VYS8 1495 aaKnown RBP7.76□□□□□ -1.17
PVT1-211ENST00000521600 POTEDQ86YR6 584 aa7.76□□□□□ -1.17
PVT1-211ENST00000521600 RNF39Q9H2S5 420 aa7.74□□□□□ -1.17
PVT1-211ENST00000521600 THOC2Q8NI27 1593 aaKnown RBP7.73□□□□□ -1.17
PVT1-211ENST00000521600 SPINK5Q9NQ38 1064 aaPredicted RBP7.73□□□□□ -1.17
PVT1-211ENST00000521600 TRHP20396 242 aaPredicted RBP7.72□□□□□ -1.17
PVT1-211ENST00000521600 NESP48681 1621 aa7.7□□□□□ -1.18
PVT1-211ENST00000521600 CAPN15O75808 1086 aa7.68□□□□□ -1.18
PVT1-211ENST00000521600 C1QBPQ07021 282 aaKnown RBP7.65□□□□□ -1.18
PVT1-211ENST00000521600 KIF21AQ7Z4S6 1674 aa7.64□□□□□ -1.19
PVT1-211ENST00000521600 POLA2Q14181 598 aa7.64□□□□□ -1.19
PVT1-211ENST00000521600 MKRN4PQ13434 485 aaPredicted RBP7.62□□□□□ -1.19
PVT1-211ENST00000521600 NCAPD3P42695 1498 aa7.62□□□□□ -1.19
PVT1-211ENST00000521600 SMARCA2P51531 1590 aa7.61□□□□□ -1.19
PVT1-211ENST00000521600 RTN4Q9NQC3 1192 aaKnown RBP7.6□□□□□ -1.19
PVT1-211ENST00000521600 FBLN2P98095 1184 aa7.59□□□□□ -1.19
PVT1-211ENST00000521600 AMER1Q5JTC6 1135 aaPredicted RBP7.59□□□□□ -1.19
PVT1-211ENST00000521600 SPDYE4A6NLX3 237 aa7.58□□□□□ -1.2
PVT1-211ENST00000521600 ABCB7O75027 752 aa7.58□□□□□ -1.2
PVT1-211ENST00000521600 BAZ1AQ9NRL2 1556 aaPredicted RBP7.58□□□□□ -1.2
PVT1-211ENST00000521600 ATAD2BQ9ULI0 1458 aa7.56□□□□□ -1.2
PVT1-211ENST00000521600 HMGXB3Q12766 1538 aa7.56□□□□□ -1.2
PVT1-211ENST00000521600 LAMC3Q9Y6N6 1575 aa7.54□□□□□ -1.2
PVT1-211ENST00000521600 RIMBP3CA6NJZ7 1639 aa7.52□□□□□ -1.2
PVT1-211ENST00000521600 RIMBP3BA6NNM3 1639 aa7.52□□□□□ -1.2
PVT1-211ENST00000521600 RIMBP3Q9UFD9 1639 aa7.52□□□□□ -1.2
PVT1-211ENST00000521600 SMARCA4P51532 1647 aa7.5□□□□□ -1.21
PVT1-211ENST00000521600 ZBTB12Q9Y330 459 aaPredicted RBP7.49□□□□□ -1.21
PVT1-211ENST00000521600 WDR62O43379 1518 aa7.47□□□□□ -1.21
PVT1-211ENST00000521600 DSG3P32926 999 aa7.47□□□□□ -1.21
PVT1-211ENST00000521600 FBXO3Q9UK99 471 aa7.46□□□□□ -1.22
PVT1-211ENST00000521600 MRC2Q9UBG0 1479 aa7.45□□□□□ -1.22
PVT1-211ENST00000521600 BAZ1BQ9UIG0 1483 aaKnown RBP7.45□□□□□ -1.22
PVT1-211ENST00000521600 PROM2Q8N271 834 aa7.45□□□□□ -1.22
PVT1-211ENST00000521600 PDS5BQ9NTI5 1447 aa7.44□□□□□ -1.22
PVT1-211ENST00000521600 OSCARQ8IYS5 282 aa7.43□□□□□ -1.22
PVT1-211ENST00000521600 ARHGEF11O15085 1522 aa7.42□□□□□ -1.22
PVT1-211ENST00000521600 PEG3Q9GZU2 1588 aa7.42□□□□□ -1.22
PVT1-211ENST00000521600 VASPP50552 380 aaPredicted RBP7.38□□□□□ -1.23
PVT1-211ENST00000521600 CACNB1Q02641 598 aaPredicted RBP7.38□□□□□ -1.23
PVT1-211ENST00000521600 ZNF692Q9BU19 519 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms