RNA–Protein interactions for RNA: ENST00000518279.5

TNPO1-211, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-211ENST00000518279 CAMSAP2Q08AD1 1489 aa26.95■■□□□ 1.91
TNPO1-211ENST00000518279 KIF3BO15066 747 aa26.95■■□□□ 1.9
TNPO1-211ENST00000518279 UBAP1LF5GYI3 381 aa26.93■■□□□ 1.9
TNPO1-211ENST00000518279 SOCS7O14512 581 aa26.92■■□□□ 1.9
TNPO1-211ENST00000518279 TNRQ92752 1358 aa26.9■■□□□ 1.9
TNPO1-211ENST00000518279 KDM5DQ9BY66 1539 aa26.9■■□□□ 1.9
TNPO1-211ENST00000518279 PZPP20742 1482 aa26.88■■□□□ 1.89
TNPO1-211ENST00000518279 LOC105371045A0A1W2PR82 267 aa26.87■■□□□ 1.89
TNPO1-211ENST00000518279 WASHC2CQ9Y4E1 1318 aa26.87■■□□□ 1.89
TNPO1-211ENST00000518279 RSPH4AQ5TD94 716 aa26.86■■□□□ 1.89
TNPO1-211ENST00000518279 NEURL4Q96JN8 1562 aa26.86■■□□□ 1.89
TNPO1-211ENST00000518279 POLR1AO95602 1720 aaPredicted RBP26.85■■□□□ 1.89
TNPO1-211ENST00000518279 FAM135AQ9P2D6 1515 aa26.85■■□□□ 1.89
TNPO1-211ENST00000518279 ARHGEF5Q12774 1597 aa26.84■■□□□ 1.89
TNPO1-211ENST00000518279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.81■■□□□ 1.88
TNPO1-211ENST00000518279 MIA2Q96PC5 1412 aa26.8■■□□□ 1.88
TNPO1-211ENST00000518279 TSPY4P0CV99 314 aa26.79■■□□□ 1.88
TNPO1-211ENST00000518279 TSPY10P0CW01 314 aa26.79■■□□□ 1.88
TNPO1-211ENST00000518279 LRRC9Q6ZRR7 1453 aa26.77■■□□□ 1.88
TNPO1-211ENST00000518279 SHANK2Q9UPX8 1470 aa26.76■■□□□ 1.87
TNPO1-211ENST00000518279 NLRP1Q9C000 1473 aa26.75■■□□□ 1.87
TNPO1-211ENST00000518279 ANKLE2Q86XL3 938 aa26.75■■□□□ 1.87
TNPO1-211ENST00000518279 UGGT1Q9NYU2 1555 aa26.75■■□□□ 1.87
TNPO1-211ENST00000518279 CPS1P31327 1500 aa26.75■■□□□ 1.87
TNPO1-211ENST00000518279 THEMISQ8N1K5 641 aaPredicted RBP26.74■■□□□ 1.87
TNPO1-211ENST00000518279 RNF17Q9BXT8 1623 aaKnown RBP26.73■■□□□ 1.87
TNPO1-211ENST00000518279 VWDEQ8N2E2 1590 aa26.73■■□□□ 1.87
TNPO1-211ENST00000518279 VPS8Q8N3P4 1428 aa26.73■■□□□ 1.87
TNPO1-211ENST00000518279 MAST1Q9Y2H9 1570 aa26.71■■□□□ 1.87
TNPO1-211ENST00000518279 ABCC3O15438 1527 aa26.71■■□□□ 1.87
TNPO1-211ENST00000518279 PIP4K2BP78356 416 aa26.71■■□□□ 1.87
TNPO1-211ENST00000518279 KANK4Q5T7N3 995 aaPredicted RBP26.71■■□□□ 1.87
TNPO1-211ENST00000518279 MED14O60244 1454 aa26.7■■□□□ 1.87
TNPO1-211ENST00000518279 SCAF1Q9H7N4 1312 aaKnown RBP26.69■■□□□ 1.86
TNPO1-211ENST00000518279 NPHP4O75161 1426 aaPredicted RBP26.69■■□□□ 1.86
TNPO1-211ENST00000518279 HSPA1LP34931 641 aa26.69■■□□□ 1.86
TNPO1-211ENST00000518279 DEPDC5O75140 1603 aa26.68■■□□□ 1.86
TNPO1-211ENST00000518279 MROH1Q8NDA8 1641 aa26.67■■□□□ 1.86
TNPO1-211ENST00000518279 TOM1O60784 492 aa26.66■■□□□ 1.86
TNPO1-211ENST00000518279 ZC3H13Q5T200 1668 aaKnown RBP26.66■■□□□ 1.86
TNPO1-211ENST00000518279 EIF2AK4Q9P2K8 1649 aaKnown RBP26.65■■□□□ 1.86
TNPO1-211ENST00000518279 ERVK-7P63135 1459 aa26.64■■□□□ 1.86
TNPO1-211ENST00000518279 IQGAP1P46940 1657 aa26.63■■□□□ 1.85
TNPO1-211ENST00000518279 MYOM3Q5VTT5 1437 aa26.63■■□□□ 1.85
TNPO1-211ENST00000518279 ALKQ9UM73 1620 aa26.62■■□□□ 1.85
TNPO1-211ENST00000518279 MAP3K1Q13233 1512 aa26.61■■□□□ 1.85
TNPO1-211ENST00000518279 CEP152O94986 1710 aa26.61■■□□□ 1.85
TNPO1-211ENST00000518279 CFAP65Q6ZU64 1925 aaKnown RBP26.6■■□□□ 1.85
TNPO1-211ENST00000518279 STRCP1A6NGW2 1772 aa26.6■■□□□ 1.85
TNPO1-211ENST00000518279 MED1Q15648 1581 aaPredicted RBP26.58■■□□□ 1.85
TNPO1-211ENST00000518279 DUOX2Q9NRD8 1548 aa26.57■■□□□ 1.84
TNPO1-211ENST00000518279 UBR1Q8IWV7 1749 aa26.55■■□□□ 1.84
TNPO1-211ENST00000518279 LRRC7Q96NW7 1537 aa26.54■■□□□ 1.84
TNPO1-211ENST00000518279 ABCC5O15440 1437 aa26.5■■□□□ 1.83
TNPO1-211ENST00000518279 KIF15Q9NS87 1388 aa26.5■■□□□ 1.83
TNPO1-211ENST00000518279 PRDM15P57071 1507 aaPredicted RBP26.49■■□□□ 1.83
TNPO1-211ENST00000518279 LTKP29376 864 aa26.49■■□□□ 1.83
TNPO1-211ENST00000518279 RRP7BPQ9NSQ0 103 aa26.49■■□□□ 1.83
TNPO1-211ENST00000518279 CROCC2H7BZ55 1655 aa26.48■■□□□ 1.83
TNPO1-211ENST00000518279 SCAF11Q99590 1463 aaKnown RBP26.48■■□□□ 1.83
TNPO1-211ENST00000518279 ARHGAP31Q2M1Z3 1444 aa26.48■■□□□ 1.83
TNPO1-211ENST00000518279 SYNMO15061 1565 aa26.47■■□□□ 1.83
TNPO1-211ENST00000518279 ARHGAP23Q9P227 1491 aa26.47■■□□□ 1.83
TNPO1-211ENST00000518279 ERBINQ96RT1 1412 aa26.46■■□□□ 1.83
TNPO1-211ENST00000518279 PTPN23Q9H3S7 1636 aa26.46■■□□□ 1.83
TNPO1-211ENST00000518279 SLIT1O75093 1534 aa26.45■■□□□ 1.83
TNPO1-211ENST00000518279 SENP3Q9H4L4 574 aaPredicted RBP26.45■■□□□ 1.82
TNPO1-211ENST00000518279 TXNDC2Q86VQ3 553 aa26.43■■□□□ 1.82
TNPO1-211ENST00000518279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.43■■□□□ 1.822e-11■■□□□ 12.8
TNPO1-211ENST00000518279 PHF23Q9BUL5 403 aaPredicted RBP26.43■■□□□ 1.82
TNPO1-211ENST00000518279 DAPK1P53355 1430 aa26.41■■□□□ 1.82
TNPO1-211ENST00000518279 PIK3C2BO00750 1634 aa26.4■■□□□ 1.82
TNPO1-211ENST00000518279 XIRP1Q702N8 1843 aaKnown RBP26.38■■□□□ 1.81
TNPO1-211ENST00000518279 FGD6Q6ZV73 1430 aa26.37■■□□□ 1.81
TNPO1-211ENST00000518279 CHIC2Q9UKJ5 165 aa26.36■■□□□ 1.81
TNPO1-211ENST00000518279 TMEM2Q9UHN6 1383 aa26.35■■□□□ 1.81
TNPO1-211ENST00000518279 EID1Q9Y6B2 187 aa26.35■■□□□ 1.81
TNPO1-211ENST00000518279 KANK1Q14678 1352 aa26.33■■□□□ 1.81
TNPO1-211ENST00000518279 APLP2Q06481 763 aa26.33■■□□□ 1.81
TNPO1-211ENST00000518279 IDI1Q13907 227 aa26.32■■□□□ 1.8
TNPO1-211ENST00000518279 LMTK2Q8IWU2 1503 aa26.32■■□□□ 1.8
TNPO1-211ENST00000518279 STAG3Q9UJ98 1225 aa26.31■■□□□ 1.8
TNPO1-211ENST00000518279 ANKRD30AQ9BXX3 1397 aa26.3■■□□□ 1.8
TNPO1-211ENST00000518279 EFCAB6Q5THR3 1501 aa26.29■■□□□ 1.8
TNPO1-211ENST00000518279 KDM5AP29375 1690 aaKnown RBP26.28■■□□□ 1.8
TNPO1-211ENST00000518279 TET3O43151 1660 aa26.25■■□□□ 1.79
TNPO1-211ENST00000518279 NOS1P29475 1434 aa26.25■■□□□ 1.79
TNPO1-211ENST00000518279 SLC26A8Q96RN1 970 aa26.24■■□□□ 1.79
TNPO1-211ENST00000518279 TMEM94Q12767 1356 aa26.23■■□□□ 1.79
TNPO1-211ENST00000518279 KCNA6P17658 529 aa26.21■■□□□ 1.79
TNPO1-211ENST00000518279 RBM33Q96EV2 1170 aaKnown RBP26.21■■□□□ 1.79
TNPO1-211ENST00000518279 RGS17Q9UGC6 210 aaPredicted RBP26.21■■□□□ 1.79
TNPO1-211ENST00000518279 ADGRL2O95490 1459 aa26.21■■□□□ 1.79
TNPO1-211ENST00000518279 ADGRB3O60242 1522 aa26.2■■□□□ 1.79
TNPO1-211ENST00000518279 FAM135BQ49AJ0 1406 aa26.2■■□□□ 1.78
TNPO1-211ENST00000518279 PROSER2Q86WR7 435 aaPredicted RBP26.16■■□□□ 1.78
TNPO1-211ENST00000518279 SLC52A1Q9NWF4 448 aa26.15■■□□□ 1.78
TNPO1-211ENST00000518279 FAM50AQ14320 339 aaKnown RBP26.14■■□□□ 1.78
TNPO1-211ENST00000518279 ROBO1Q9Y6N7 1651 aa26.13■■□□□ 1.77
TNPO1-211ENST00000518279 NWD1Q149M9 1564 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms