RNA–Protein interactions for RNA: ENST00000518279.5

TNPO1-211, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-211ENST00000518279 NISCHQ9Y2I1 1504 aa42.53■■■■■ 4.4
TNPO1-211ENST00000518279 ABCC9O60706 1549 aa38.5■■■■□ 3.75
TNPO1-211ENST00000518279 CCDC180Q9P1Z9 1646 aa38.21■■■■□ 3.71
TNPO1-211ENST00000518279 RB1CC1Q8TDY2 1594 aa36.49■■■■□ 3.43
TNPO1-211ENST00000518279 DNAJC5BQ9UF47 199 aa36.38■■■■□ 3.41
TNPO1-211ENST00000518279 NACADO15069 1562 aa36.18■■■■□ 3.38
TNPO1-211ENST00000518279 DCAF8L2P0C7V8 631 aa36■■■■□ 3.35
TNPO1-211ENST00000518279 PABPN1Q86U42 306 aaKnown RBP eCLIP35.84■■■■□ 3.33
TNPO1-211ENST00000518279 UNC13AQ9UPW8 1703 aa35.72■■■■□ 3.31
TNPO1-211ENST00000518279 MYO15BQ96JP2 1530 aa35.61■■■■□ 3.29
TNPO1-211ENST00000518279 BICRAQ9NZM4 1560 aa35.51■■■■□ 3.27
TNPO1-211ENST00000518279 ZCCHC6Q5VYS8 1495 aaKnown RBP35.2■■■■□ 3.23
TNPO1-211ENST00000518279 DCAF1Q9Y4B6 1507 aa35.08■■■■□ 3.21
TNPO1-211ENST00000518279 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
TNPO1-211ENST00000518279 SCRIBQ14160 1630 aa34.86■■■■□ 3.17
TNPO1-211ENST00000518279 CC2D2AQ9P2K1 1620 aa34.75■■■■□ 3.15
TNPO1-211ENST00000518279 CECR2Q9BXF3 1484 aa34.68■■■■□ 3.14
TNPO1-211ENST00000518279 EIF4G1Q04637 1599 aaKnown RBP34.62■■■■□ 3.13
TNPO1-211ENST00000518279 DNAJC5Q9H3Z4 198 aa33.5■■■□□ 2.95
TNPO1-211ENST00000518279 NCAPD3P42695 1498 aa33.44■■■□□ 2.94
TNPO1-211ENST00000518279 ATAD2BQ9ULI0 1458 aa33.31■■■□□ 2.92
TNPO1-211ENST00000518279 SMARCA4P51532 1647 aa33.22■■■□□ 2.91
TNPO1-211ENST00000518279 CUX2O14529 1486 aa33.22■■■□□ 2.91
TNPO1-211ENST00000518279 ERCC6Q03468 1493 aa33.21■■■□□ 2.91
TNPO1-211ENST00000518279 SMARCA2P51531 1590 aa33.17■■■□□ 2.9
TNPO1-211ENST00000518279 HMGXB3Q12766 1538 aa33.15■■■□□ 2.9
TNPO1-211ENST00000518279 NESP48681 1621 aa33.04■■■□□ 2.88
TNPO1-211ENST00000518279 BAZ1AQ9NRL2 1556 aaPredicted RBP33■■■□□ 2.87
TNPO1-211ENST00000518279 BAZ1BQ9UIG0 1483 aaKnown RBP32.96■■■□□ 2.87
TNPO1-211ENST00000518279 PEG3Q9GZU2 1588 aa32.89■■■□□ 2.86
TNPO1-211ENST00000518279 MROH2BQ7Z745 1585 aa32.8■■■□□ 2.84
TNPO1-211ENST00000518279 THOC2Q8NI27 1593 aaKnown RBP32.7■■■□□ 2.83
TNPO1-211ENST00000518279 LAMC3Q9Y6N6 1575 aa32.69■■■□□ 2.82
TNPO1-211ENST00000518279 KIF21AQ7Z4S6 1674 aa32.58■■■□□ 2.81
TNPO1-211ENST00000518279 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.79
TNPO1-211ENST00000518279 CADPSQ9ULU8 1353 aa32.41■■■□□ 2.78
TNPO1-211ENST00000518279 WIZO95785 1651 aa32.39■■■□□ 2.78
TNPO1-211ENST00000518279 MRC2Q9UBG0 1479 aa32.26■■■□□ 2.75
TNPO1-211ENST00000518279 WDR62O43379 1518 aa32.2■■■□□ 2.74
TNPO1-211ENST00000518279 CEP164Q9UPV0 1460 aa32.08■■■□□ 2.73
TNPO1-211ENST00000518279 FANCD2Q9BXW9 1451 aa32.04■■■□□ 2.72
TNPO1-211ENST00000518279 RSF1Q96T23 1441 aaPredicted RBP32.03■■■□□ 2.72
TNPO1-211ENST00000518279 CFTRP13569 1480 aa32■■■□□ 2.71
TNPO1-211ENST00000518279 TRIM41Q8WV44 630 aa31.95■■■□□ 2.71
TNPO1-211ENST00000518279 TOP2AP11388 1531 aaKnown RBP31.93■■■□□ 2.7
TNPO1-211ENST00000518279 URB2Q14146 1524 aaKnown RBP31.83■■■□□ 2.69
TNPO1-211ENST00000518279 OSCARQ8IYS5 282 aa31.68■■■□□ 2.66
TNPO1-211ENST00000518279 PRDM2Q13029 1718 aa31.63■■■□□ 2.65
TNPO1-211ENST00000518279 CCDC88BA6NC98 1476 aa31.6■■■□□ 2.65
TNPO1-211ENST00000518279 ZNF608Q9ULD9 1512 aaPredicted RBP31.49■■■□□ 2.63
TNPO1-211ENST00000518279 IFT140Q96RY7 1462 aa31.46■■■□□ 2.63
TNPO1-211ENST00000518279 TOPBP1Q92547 1522 aa31.42■■■□□ 2.62
TNPO1-211ENST00000518279 RIMBP3CA6NJZ7 1639 aa31.32■■■□□ 2.6
TNPO1-211ENST00000518279 RIMBP3BA6NNM3 1639 aa31.32■■■□□ 2.6
TNPO1-211ENST00000518279 RIMBP3Q9UFD9 1639 aa31.32■■■□□ 2.6
TNPO1-211ENST00000518279 ABCC8Q09428 1581 aa31.27■■■□□ 2.6
TNPO1-211ENST00000518279 DNMBPQ6XZF7 1577 aa31.27■■■□□ 2.6
TNPO1-211ENST00000518279 EIF4G3O43432 1585 aaKnown RBP31.26■■■□□ 2.6
TNPO1-211ENST00000518279 ARHGEF11O15085 1522 aa31.19■■■□□ 2.58
TNPO1-211ENST00000518279 TARBP1Q13395 1621 aaKnown RBP31.17■■■□□ 2.58
TNPO1-211ENST00000518279 AQRO60306 1485 aaKnown RBP eCLIP31.16■■■□□ 2.586e-8■■■■■ 35.6
TNPO1-211ENST00000518279 POLA1P09884 1462 aaPredicted RBP31.09■■■□□ 2.57
TNPO1-211ENST00000518279 CHD1O14646 1710 aa31.07■■■□□ 2.56
TNPO1-211ENST00000518279 RAD54L2Q9Y4B4 1467 aa31.01■■■□□ 2.55
TNPO1-211ENST00000518279 CYB5RLQ6IPT4 315 aa30.99■■■□□ 2.55
TNPO1-211ENST00000518279 FBLN2P98095 1184 aa30.97■■■□□ 2.55
TNPO1-211ENST00000518279 TDRD9Q8NDG6 1382 aaKnown RBP30.93■■■□□ 2.54
TNPO1-211ENST00000518279 SOGA1O94964 1423 aa30.93■■■□□ 2.54
TNPO1-211ENST00000518279 ARAP1Q96P48 1450 aa30.89■■■□□ 2.53
TNPO1-211ENST00000518279 FGD5Q6ZNL6 1462 aa30.87■■■□□ 2.53
TNPO1-211ENST00000518279 CUX1P39880 1505 aa30.82■■■□□ 2.52
TNPO1-211ENST00000518279 SNAPC4Q5SXM2 1469 aa30.82■■■□□ 2.52
TNPO1-211ENST00000518279 WDR97A6NE52 1622 aa30.76■■■□□ 2.52
TNPO1-211ENST00000518279 CLASP1Q7Z460 1538 aa30.72■■■□□ 2.51
TNPO1-211ENST00000518279 CHMP7Q8WUX9 453 aaPredicted RBP30.69■■■□□ 2.5
TNPO1-211ENST00000518279 MAGI1Q96QZ7 1491 aaPredicted RBP30.69■■■□□ 2.5
TNPO1-211ENST00000518279 TRHP20396 242 aaPredicted RBP30.68■■■□□ 2.5
TNPO1-211ENST00000518279 GRIN2BQ13224 1484 aa30.68■■■□□ 2.5
TNPO1-211ENST00000518279 SYNJ1O43426 1573 aa30.63■■■□□ 2.49
TNPO1-211ENST00000518279 SYNJ2O15056 1496 aa30.61■■■□□ 2.49
TNPO1-211ENST00000518279 PBRM1Q86U86 1689 aa30.55■■■□□ 2.48
TNPO1-211ENST00000518279 GAPVD1Q14C86 1478 aa30.55■■■□□ 2.48
TNPO1-211ENST00000518279 ABCA10Q8WWZ4 1543 aa30.48■■■□□ 2.47
TNPO1-211ENST00000518279 ABCA5Q8WWZ7 1642 aa30.47■■■□□ 2.47
TNPO1-211ENST00000518279 AEBP2Q6ZN18 517 aaPredicted RBP30.47■■■□□ 2.47
TNPO1-211ENST00000518279 SUPT5HO00267 1087 aaKnown RBP30.45■■■□□ 2.47
TNPO1-211ENST00000518279 WRNQ14191 1432 aaPredicted RBP eCLIP30.3■■■□□ 2.44
TNPO1-211ENST00000518279 GRIN2AQ12879 1464 aa30.3■■■□□ 2.44
TNPO1-211ENST00000518279 ERCC6L2Q5T890 1561 aa30.28■■■□□ 2.44
TNPO1-211ENST00000518279 ADAMTS12P58397 1594 aa30.25■■■□□ 2.43
TNPO1-211ENST00000518279 TOP2BQ02880 1626 aa30.24■■■□□ 2.43
TNPO1-211ENST00000518279 BIVM-ERCC5R4GMW8 1640 aa30.24■■■□□ 2.43
TNPO1-211ENST00000518279 CEP170Q5SW79 1584 aa30.22■■■□□ 2.43
TNPO1-211ENST00000518279 NUP160Q12769 1436 aa30.21■■■□□ 2.43
TNPO1-211ENST00000518279 FHAD1B1AJZ9 1412 aa30.14■■■□□ 2.42
TNPO1-211ENST00000518279 SHROOM2Q13796 1616 aa30.1■■■□□ 2.41
TNPO1-211ENST00000518279 ERICH3Q5RHP9 1530 aa30.08■■■□□ 2.41
TNPO1-211ENST00000518279 PRG4Q92954 1404 aaPredicted RBP29.94■■■□□ 2.38
TNPO1-211ENST00000518279 JPH4Q96JJ6 628 aa29.9■■■□□ 2.38
TNPO1-211ENST00000518279 CHIC1Q5VXU3 224 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms