RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 CHADLQ6NUI6 762 aa8.94□□□□□ -0.98
SCARNA6.1-201ENST00000516989 LRRC9Q6ZRR7 1453 aa8.94□□□□□ -0.98
SCARNA6.1-201ENST00000516989 RAPGEF3O95398 923 aa8.93□□□□□ -0.98
SCARNA6.1-201ENST00000516989 MAP3K1Q13233 1512 aa8.93□□□□□ -0.98
SCARNA6.1-201ENST00000516989 KIF14Q15058 1648 aa8.93□□□□□ -0.98
SCARNA6.1-201ENST00000516989 CFAP43Q8NDM7 1665 aa8.92□□□□□ -0.98
SCARNA6.1-201ENST00000516989 ABCA9Q8IUA7 1624 aa8.92□□□□□ -0.98
SCARNA6.1-201ENST00000516989 MAP3K4Q9Y6R4 1608 aa8.92□□□□□ -0.98
SCARNA6.1-201ENST00000516989 PHLDB1Q86UU1 1377 aa8.92□□□□□ -0.98
SCARNA6.1-201ENST00000516989 PDAP1Q13442 181 aaKnown RBP8.92□□□□□ -0.98
SCARNA6.1-201ENST00000516989 MYT1LQ9UL68 1186 aa8.92□□□□□ -0.98
SCARNA6.1-201ENST00000516989 AKNAQ7Z591 1439 aa8.91□□□□□ -0.98
SCARNA6.1-201ENST00000516989 WDR70Q9NW82 654 aa8.91□□□□□ -0.98
SCARNA6.1-201ENST00000516989 PCDHB8Q9UN66 801 aa8.91□□□□□ -0.98
SCARNA6.1-201ENST00000516989 PCDHB13Q9Y5F0 798 aa8.91□□□□□ -0.98
SCARNA6.1-201ENST00000516989 TTC37Q6PGP7 1564 aa8.9□□□□□ -0.98
SCARNA6.1-201ENST00000516989 EHBP1L1Q8N3D4 1523 aa8.9□□□□□ -0.98
SCARNA6.1-201ENST00000516989 GPATCH8Q9UKJ3 1502 aaKnown RBP8.9□□□□□ -0.98
SCARNA6.1-201ENST00000516989 FANCAO15360 1455 aa8.9□□□□□ -0.98
SCARNA6.1-201ENST00000516989 NCOA2Q15596 1464 aa8.9□□□□□ -0.98
SCARNA6.1-201ENST00000516989 ZNF644Q9H582 1327 aaPredicted RBP8.9□□□□□ -0.98
SCARNA6.1-201ENST00000516989 HNRNPMP52272 730 aaKnown RBP eCLIP8.9□□□□□ -0.98
SCARNA6.1-201ENST00000516989 CADPS2Q86UW7 1296 aa8.9□□□□□ -0.98
SCARNA6.1-201ENST00000516989 AFAP1Q8N556 730 aa8.9□□□□□ -0.98
SCARNA6.1-201ENST00000516989 FARP1Q9Y4F1 1045 aaPredicted RBP8.9□□□□□ -0.98
SCARNA6.1-201ENST00000516989 ARHGAP5Q13017 1502 aa8.9□□□□□ -0.99
SCARNA6.1-201ENST00000516989 NEO1Q92859 1461 aa8.89□□□□□ -0.99
SCARNA6.1-201ENST00000516989 COL17A1Q9UMD9 1497 aaPredicted RBP8.89□□□□□ -0.99
SCARNA6.1-201ENST00000516989 SCAPERQ9BY12 1400 aa8.89□□□□□ -0.99
SCARNA6.1-201ENST00000516989 PPRC1Q5VV67 1664 aaKnown RBP8.88□□□□□ -0.99
SCARNA6.1-201ENST00000516989 SUPT6HQ7KZ85 1726 aaKnown RBP8.87□□□□□ -0.99
SCARNA6.1-201ENST00000516989 DENND4BO75064 1496 aaPredicted RBP8.87□□□□□ -0.99
SCARNA6.1-201ENST00000516989 ADGRL1O94910 1474 aa8.87□□□□□ -0.99
SCARNA6.1-201ENST00000516989 KDM6BO15054 1643 aa8.87□□□□□ -0.99
SCARNA6.1-201ENST00000516989 PSEN1P49768 467 aa8.86□□□□□ -0.99
SCARNA6.1-201ENST00000516989 FAM50AQ14320 339 aaKnown RBP8.86□□□□□ -0.99
SCARNA6.1-201ENST00000516989 MYO5CQ9NQX4 1742 aa8.85□□□□□ -0.99
SCARNA6.1-201ENST00000516989 ARAP3Q8WWN8 1544 aa8.85□□□□□ -0.99
SCARNA6.1-201ENST00000516989 TSPY4P0CV99 314 aa8.85□□□□□ -0.99
SCARNA6.1-201ENST00000516989 TSPY10P0CW01 314 aa8.85□□□□□ -0.99
SCARNA6.1-201ENST00000516989 RSPH4AQ5TD94 716 aa8.85□□□□□ -0.99
SCARNA6.1-201ENST00000516989 KCNV2Q8TDN2 545 aa8.85□□□□□ -0.99
SCARNA6.1-201ENST00000516989 MYOM3Q5VTT5 1437 aa8.85□□□□□ -0.99
SCARNA6.1-201ENST00000516989 ZNF579Q8NAF0 562 aaKnown RBP8.84□□□□□ -0.99
SCARNA6.1-201ENST00000516989 MFRPQ9BY79 579 aa8.84□□□□□ -0.99
SCARNA6.1-201ENST00000516989 CDC42BPBQ9Y5S2 1711 aa8.84□□□□□ -0.99
SCARNA6.1-201ENST00000516989 CCDC61Q9Y6R9 512 aa8.84□□□□□ -0.99
SCARNA6.1-201ENST00000516989 CDC42BPAQ5VT25 1732 aa8.83□□□□□ -1
SCARNA6.1-201ENST00000516989 TRAPPC8Q9Y2L5 1435 aa8.83□□□□□ -1
SCARNA6.1-201ENST00000516989 SPAG9O60271 1321 aaKnown RBP8.82□□□□□ -1
SCARNA6.1-201ENST00000516989 MIA2Q96PC5 1412 aa8.82□□□□□ -1
SCARNA6.1-201ENST00000516989 KIAA1107Q9UPP5 1409 aa8.82□□□□□ -1
SCARNA6.1-201ENST00000516989 ARHGEF12Q9NZN5 1544 aa8.82□□□□□ -1
SCARNA6.1-201ENST00000516989 PREX2Q70Z35 1606 aa8.82□□□□□ -1
SCARNA6.1-201ENST00000516989 PLEKHH2Q8IVE3 1493 aa8.82□□□□□ -1
SCARNA6.1-201ENST00000516989 CFAP74Q9C0B2 1584 aa8.82□□□□□ -1
SCARNA6.1-201ENST00000516989 ARID4BQ4LE39 1312 aaPredicted RBP8.81□□□□□ -1
SCARNA6.1-201ENST00000516989 PRKAR2AP13861 404 aaKnown RBP8.81□□□□□ -1
SCARNA6.1-201ENST00000516989 ITGAEP38570 1179 aa8.81□□□□□ -1
SCARNA6.1-201ENST00000516989 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
SCARNA6.1-201ENST00000516989 POGZQ7Z3K3 1410 aa8.8□□□□□ -1
SCARNA6.1-201ENST00000516989 CHIC2Q9UKJ5 165 aa8.8□□□□□ -1
SCARNA6.1-201ENST00000516989 GTF3C3Q9Y5Q9 886 aa8.8□□□□□ -1
SCARNA6.1-201ENST00000516989 SAMD9LQ8IVG5 1584 aa8.8□□□□□ -1
SCARNA6.1-201ENST00000516989 FGD6Q6ZV73 1430 aa8.8□□□□□ -1
SCARNA6.1-201ENST00000516989 ITSN2Q9NZM3 1697 aa8.79□□□□□ -1
SCARNA6.1-201ENST00000516989 CAMSAP2Q08AD1 1489 aa8.79□□□□□ -1
SCARNA6.1-201ENST00000516989 ZNF518AQ6AHZ1 1483 aa8.79□□□□□ -1
SCARNA6.1-201ENST00000516989 MLECQ14165 292 aa8.79□□□□□ -1
SCARNA6.1-201ENST00000516989 LMOD2Q6P5Q4 547 aa8.79□□□□□ -1
SCARNA6.1-201ENST00000516989 ABCC1P33527 1531 aa8.79□□□□□ -1
SCARNA6.1-201ENST00000516989 SYCP2Q9BX26 1530 aa8.79□□□□□ -1
SCARNA6.1-201ENST00000516989 MBD5Q9P267 1494 aa8.78□□□□□ -1
SCARNA6.1-201ENST00000516989 PPP1R37O75864 691 aa8.78□□□□□ -1
SCARNA6.1-201ENST00000516989 TULP1O00294 542 aaPredicted RBP8.77□□□□□ -1.01
SCARNA6.1-201ENST00000516989 IFNL1Q8IU54 200 aa8.77□□□□□ -1.01
SCARNA6.1-201ENST00000516989 YEATS2Q9ULM3 1422 aa8.77□□□□□ -1.01
SCARNA6.1-201ENST00000516989 MAGI2Q86UL8 1455 aa8.77□□□□□ -1.01
SCARNA6.1-201ENST00000516989 PTPN23Q9H3S7 1636 aa8.76□□□□□ -1.01
SCARNA6.1-201ENST00000516989 SOCS7O14512 581 aa8.76□□□□□ -1.01
SCARNA6.1-201ENST00000516989 NLRP6P59044 892 aa8.76□□□□□ -1.01
SCARNA6.1-201ENST00000516989 EFCAB3Q8N7B9 438 aa8.76□□□□□ -1.01
SCARNA6.1-201ENST00000516989 RRP7BPQ9NSQ0 103 aa8.76□□□□□ -1.01
SCARNA6.1-201ENST00000516989 ATP10AO60312 1499 aa8.76□□□□□ -1.01
SCARNA6.1-201ENST00000516989 CCDC141Q6ZP82 1450 aa8.76□□□□□ -1.01
SCARNA6.1-201ENST00000516989 MLH3Q9UHC1 1453 aa8.76□□□□□ -1.01
SCARNA6.1-201ENST00000516989 FRMPD1Q5SYB0 1578 aa8.75□□□□□ -1.01
SCARNA6.1-201ENST00000516989 ABCC5O15440 1437 aa8.75□□□□□ -1.01
SCARNA6.1-201ENST00000516989 PAK3O75914 559 aaPredicted RBP8.75□□□□□ -1.01
SCARNA6.1-201ENST00000516989 TMEM132AQ24JP5 1023 aa8.75□□□□□ -1.01
SCARNA6.1-201ENST00000516989 ARHGEF1Q92888 912 aaKnown RBP8.75□□□□□ -1.01
SCARNA6.1-201ENST00000516989 CABP2Q9NPB3 220 aa8.75□□□□□ -1.01
SCARNA6.1-201ENST00000516989 TIMELESSQ9UNS1 1208 aa8.75□□□□□ -1.01
SCARNA6.1-201ENST00000516989 TCOF1Q13428 1488 aaKnown RBP8.75□□□□□ -1.01
SCARNA6.1-201ENST00000516989 LMTK3Q96Q04 1460 aa8.75□□□□□ -1.01
SCARNA6.1-201ENST00000516989 ZFYVE16Q7Z3T8 1539 aa8.75□□□□□ -1.01
SCARNA6.1-201ENST00000516989 RICTORQ6R327 1708 aa8.74□□□□□ -1.01
SCARNA6.1-201ENST00000516989 SOX12O15370 315 aa8.74□□□□□ -1.01
SCARNA6.1-201ENST00000516989 MAP3K13O43283 966 aa8.74□□□□□ -1.01
SCARNA6.1-201ENST00000516989 FXR2P51116 673 aaKnown RBP eCLIP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms