RNA–Protein interactions for RNA: ENST00000508139.1

FGFR4-210, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 5

Gene FGFR4, Length 720 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-210ENST00000508139 RTEL1-TNFRSF6BF6WH68 1400 aa27.88■■■□□ 2.05
FGFR4-210ENST00000508139 MED1Q15648 1581 aaPredicted RBP27.88■■■□□ 2.05
FGFR4-210ENST00000508139 TNRQ92752 1358 aa27.87■■■□□ 2.05
FGFR4-210ENST00000508139 CPS1P31327 1500 aa27.87■■■□□ 2.05
FGFR4-210ENST00000508139 DHX29Q7Z478 1369 aaKnown RBP27.86■■■□□ 2.05
FGFR4-210ENST00000508139 PZPP20742 1482 aa27.85■■■□□ 2.05
FGFR4-210ENST00000508139 CCDC141Q6ZP82 1450 aa27.84■■■□□ 2.05
FGFR4-210ENST00000508139 FBXO31Q5XUX0 539 aaPredicted RBP27.84■■■□□ 2.05
FGFR4-210ENST00000508139 CEP162Q5TB80 1403 aa27.84■■■□□ 2.05
FGFR4-210ENST00000508139 CAMSAP2Q08AD1 1489 aa27.83■■■□□ 2.05
FGFR4-210ENST00000508139 PIP4K2BP78356 416 aa27.83■■■□□ 2.05
FGFR4-210ENST00000508139 SHANK2Q9UPX8 1470 aa27.83■■■□□ 2.04
FGFR4-210ENST00000508139 FAM135AQ9P2D6 1515 aa27.82■■■□□ 2.04
FGFR4-210ENST00000508139 KIF3BO15066 747 aa27.82■■■□□ 2.04
FGFR4-210ENST00000508139 HSPA1LP34931 641 aa27.81■■■□□ 2.04
FGFR4-210ENST00000508139 VWDEQ8N2E2 1590 aa27.81■■■□□ 2.04
FGFR4-210ENST00000508139 IQGAP1P46940 1657 aa27.78■■■□□ 2.04
FGFR4-210ENST00000508139 CFAP65Q6ZU64 1925 aaKnown RBP27.78■■■□□ 2.04
FGFR4-210ENST00000508139 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.77■■■□□ 2.04
FGFR4-210ENST00000508139 DEPDC5O75140 1603 aa27.77■■■□□ 2.04
FGFR4-210ENST00000508139 UGGT1Q9NYU2 1555 aa27.77■■■□□ 2.04
FGFR4-210ENST00000508139 STRCP1A6NGW2 1772 aa27.76■■■□□ 2.03
FGFR4-210ENST00000508139 NCOA2Q15596 1464 aa27.76■■■□□ 2.03
FGFR4-210ENST00000508139 TOM1O60784 492 aa27.74■■■□□ 2.03
FGFR4-210ENST00000508139 WASHC2CQ9Y4E1 1318 aa27.73■■■□□ 2.03
FGFR4-210ENST00000508139 NLRP1Q9C000 1473 aa27.73■■■□□ 2.03
FGFR4-210ENST00000508139 ALKQ9UM73 1620 aa27.73■■■□□ 2.03
FGFR4-210ENST00000508139 ARHGEF5Q12774 1597 aa27.73■■■□□ 2.03
FGFR4-210ENST00000508139 ZC3H13Q5T200 1668 aaKnown RBP27.72■■■□□ 2.03
FGFR4-210ENST00000508139 RNF17Q9BXT8 1623 aaKnown RBP27.72■■■□□ 2.03
FGFR4-210ENST00000508139 CEP152O94986 1710 aa27.7■■■□□ 2.03
FGFR4-210ENST00000508139 NPHP4O75161 1426 aaPredicted RBP27.7■■■□□ 2.03
FGFR4-210ENST00000508139 MIA2Q96PC5 1412 aa27.7■■■□□ 2.03
FGFR4-210ENST00000508139 ANKLE2Q86XL3 938 aa27.7■■■□□ 2.02
FGFR4-210ENST00000508139 MED14O60244 1454 aa27.68■■■□□ 2.02
FGFR4-210ENST00000508139 THEMISQ8N1K5 641 aaPredicted RBP27.66■■■□□ 2.02
FGFR4-210ENST00000508139 SYNMO15061 1565 aa27.65■■■□□ 2.02
FGFR4-210ENST00000508139 ABCC3O15438 1527 aa27.65■■■□□ 2.02
FGFR4-210ENST00000508139 EIF2AK4Q9P2K8 1649 aaKnown RBP27.63■■■□□ 2.01
FGFR4-210ENST00000508139 UBR1Q8IWV7 1749 aa27.63■■■□□ 2.01
FGFR4-210ENST00000508139 SENP3Q9H4L4 574 aaPredicted RBP27.61■■■□□ 2.01
FGFR4-210ENST00000508139 MAST1Q9Y2H9 1570 aa27.6■■■□□ 2.01
FGFR4-210ENST00000508139 MROH1Q8NDA8 1641 aa27.6■■■□□ 2.01
FGFR4-210ENST00000508139 RSPH4AQ5TD94 716 aa27.6■■■□□ 2.01
FGFR4-210ENST00000508139 ERVK-7P63135 1459 aa27.58■■■□□ 2.01
FGFR4-210ENST00000508139 LRRC7Q96NW7 1537 aa27.58■■■□□ 2.01
FGFR4-210ENST00000508139 PHF23Q9BUL5 403 aaPredicted RBP27.58■■■□□ 2.01
FGFR4-210ENST00000508139 TSPY4P0CV99 314 aa27.57■■■□□ 2
FGFR4-210ENST00000508139 TSPY10P0CW01 314 aa27.57■■■□□ 2
FGFR4-210ENST00000508139 XIRP1Q702N8 1843 aaKnown RBP27.57■■■□□ 2
FGFR4-210ENST00000508139 LRRC9Q6ZRR7 1453 aa27.5■■□□□ 1.99
FGFR4-210ENST00000508139 CROCC2H7BZ55 1655 aa27.47■■□□□ 1.99
FGFR4-210ENST00000508139 SCAF11Q99590 1463 aaKnown RBP27.47■■□□□ 1.99
FGFR4-210ENST00000508139 DUOX2Q9NRD8 1548 aa27.43■■□□□ 1.98
FGFR4-210ENST00000508139 PIK3C2BO00750 1634 aa27.43■■□□□ 1.98
FGFR4-210ENST00000508139 PRDM15P57071 1507 aaPredicted RBP27.41■■□□□ 1.98
FGFR4-210ENST00000508139 SLIT1O75093 1534 aa27.41■■□□□ 1.98
FGFR4-210ENST00000508139 ARHGAP23Q9P227 1491 aa27.4■■□□□ 1.98
FGFR4-210ENST00000508139 VPS8Q8N3P4 1428 aa27.4■■□□□ 1.98
FGFR4-210ENST00000508139 MYOM3Q5VTT5 1437 aa27.37■■□□□ 1.97
FGFR4-210ENST00000508139 LTKP29376 864 aa27.35■■□□□ 1.97
FGFR4-210ENST00000508139 TXNDC2Q86VQ3 553 aa27.33■■□□□ 1.97
FGFR4-210ENST00000508139 KANK4Q5T7N3 995 aaPredicted RBP27.32■■□□□ 1.96
FGFR4-210ENST00000508139 KIF15Q9NS87 1388 aa27.31■■□□□ 1.96
FGFR4-210ENST00000508139 ARHGAP31Q2M1Z3 1444 aa27.31■■□□□ 1.96
FGFR4-210ENST00000508139 LOC105371045A0A1W2PR82 267 aa27.3■■□□□ 1.96
FGFR4-210ENST00000508139 PTPN23Q9H3S7 1636 aa27.3■■□□□ 1.96
FGFR4-210ENST00000508139 KDM5AP29375 1690 aaKnown RBP27.3■■□□□ 1.96
FGFR4-210ENST00000508139 ERBINQ96RT1 1412 aa27.29■■□□□ 1.96
FGFR4-210ENST00000508139 MAP3K1Q13233 1512 aa27.29■■□□□ 1.96
FGFR4-210ENST00000508139 ROBO1Q9Y6N7 1651 aa27.29■■□□□ 1.96
FGFR4-210ENST00000508139 EID1Q9Y6B2 187 aa27.27■■□□□ 1.96
FGFR4-210ENST00000508139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.26■■□□□ 1.95
FGFR4-210ENST00000508139 RGS17Q9UGC6 210 aaPredicted RBP27.26■■□□□ 1.95
FGFR4-210ENST00000508139 EFCAB6Q5THR3 1501 aa27.26■■□□□ 1.95
FGFR4-210ENST00000508139 RRP7BPQ9NSQ0 103 aa27.24■■□□□ 1.95
FGFR4-210ENST00000508139 ABCC5O15440 1437 aa27.24■■□□□ 1.95
FGFR4-210ENST00000508139 TMEM2Q9UHN6 1383 aa27.23■■□□□ 1.95
FGFR4-210ENST00000508139 MYO5BQ9ULV0 1848 aa27.23■■□□□ 1.95
FGFR4-210ENST00000508139 STAG3Q9UJ98 1225 aa27.22■■□□□ 1.95
FGFR4-210ENST00000508139 TMEM94Q12767 1356 aa27.2■■□□□ 1.94
FGFR4-210ENST00000508139 SETD1AO15047 1707 aaKnown RBP27.19■■□□□ 1.94
FGFR4-210ENST00000508139 FAM135BQ49AJ0 1406 aa27.19■■□□□ 1.94
FGFR4-210ENST00000508139 KANK1Q14678 1352 aa27.19■■□□□ 1.94
FGFR4-210ENST00000508139 DAPK1P53355 1430 aa27.18■■□□□ 1.94
FGFR4-210ENST00000508139 TET3O43151 1660 aa27.17■■□□□ 1.94
FGFR4-210ENST00000508139 ADGRB3O60242 1522 aa27.17■■□□□ 1.94
FGFR4-210ENST00000508139 NWD1Q149M9 1564 aa27.17■■□□□ 1.94
FGFR4-210ENST00000508139 PHLPP1O60346 1717 aa27.16■■□□□ 1.94
FGFR4-210ENST00000508139 LMTK2Q8IWU2 1503 aa27.16■■□□□ 1.94
FGFR4-210ENST00000508139 RBM33Q96EV2 1170 aaKnown RBP27.15■■□□□ 1.94
FGFR4-210ENST00000508139 SLC26A8Q96RN1 970 aa27.13■■□□□ 1.93
FGFR4-210ENST00000508139 GCC2Q8IWJ2 1684 aa27.12■■□□□ 1.93
FGFR4-210ENST00000508139 IDI1Q13907 227 aa27.11■■□□□ 1.93
FGFR4-210ENST00000508139 PROSER2Q86WR7 435 aaPredicted RBP27.11■■□□□ 1.93
FGFR4-210ENST00000508139 NKTRP30414 1462 aaKnown RBP27.11■■□□□ 1.93
FGFR4-210ENST00000508139 CHD2O14647 1828 aaKnown RBP27.11■■□□□ 1.93
FGFR4-210ENST00000508139 KCNA6P17658 529 aa27.1■■□□□ 1.93
FGFR4-210ENST00000508139 POTEAQ6S8J7 498 aa27.1■■□□□ 1.93
FGFR4-210ENST00000508139 FGD6Q6ZV73 1430 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms