RNA–Protein interactions for RNA: ENST00000508139.1

FGFR4-210, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 5

Gene FGFR4, Length 720 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-210ENST00000508139 NISCHQ9Y2I1 1504 aa43.94■■■■■ 4.62
FGFR4-210ENST00000508139 ABCC9O60706 1549 aa40.11■■■■■ 4.01
FGFR4-210ENST00000508139 CCDC180Q9P1Z9 1646 aa39.75■■■■□ 3.95
FGFR4-210ENST00000508139 RB1CC1Q8TDY2 1594 aa37.98■■■■□ 3.67
FGFR4-210ENST00000508139 DNAJC5BQ9UF47 199 aa37.89■■■■□ 3.66
FGFR4-210ENST00000508139 NACADO15069 1562 aa37.57■■■■□ 3.6
FGFR4-210ENST00000508139 UNC13AQ9UPW8 1703 aa37.36■■■■□ 3.57
FGFR4-210ENST00000508139 DCAF8L2P0C7V8 631 aa37.24■■■■□ 3.55
FGFR4-210ENST00000508139 PABPN1Q86U42 306 aaKnown RBP eCLIP37.19■■■■□ 3.54
FGFR4-210ENST00000508139 BICRAQ9NZM4 1560 aa36.91■■■■□ 3.5
FGFR4-210ENST00000508139 MYO15BQ96JP2 1530 aa36.82■■■■□ 3.48
FGFR4-210ENST00000508139 ZCCHC6Q5VYS8 1495 aaKnown RBP36.34■■■■□ 3.41
FGFR4-210ENST00000508139 SHROOM4Q9ULL8 1493 aa36.25■■■■□ 3.39
FGFR4-210ENST00000508139 CC2D2AQ9P2K1 1620 aa36.25■■■■□ 3.39
FGFR4-210ENST00000508139 SCRIBQ14160 1630 aa36.23■■■■□ 3.39
FGFR4-210ENST00000508139 DCAF1Q9Y4B6 1507 aa36.22■■■■□ 3.39
FGFR4-210ENST00000508139 CECR2Q9BXF3 1484 aa36.13■■■■□ 3.37
FGFR4-210ENST00000508139 EIF4G1Q04637 1599 aaKnown RBP36.03■■■■□ 3.36
FGFR4-210ENST00000508139 DNAJC5Q9H3Z4 198 aa35.07■■■■□ 3.2
FGFR4-210ENST00000508139 CUX2O14529 1486 aa34.68■■■■□ 3.14
FGFR4-210ENST00000508139 ERCC6Q03468 1493 aa34.65■■■■□ 3.14
FGFR4-210ENST00000508139 NCAPD3P42695 1498 aa34.6■■■■□ 3.13
FGFR4-210ENST00000508139 ATAD2BQ9ULI0 1458 aa34.49■■■■□ 3.11
FGFR4-210ENST00000508139 SMARCA4P51532 1647 aa34.46■■■■□ 3.11
FGFR4-210ENST00000508139 SMARCA2P51531 1590 aa34.41■■■■□ 3.1
FGFR4-210ENST00000508139 HMGXB3Q12766 1538 aa34.41■■■■□ 3.1
FGFR4-210ENST00000508139 NESP48681 1621 aa34.34■■■■□ 3.09
FGFR4-210ENST00000508139 BAZ1BQ9UIG0 1483 aaKnown RBP34.18■■■■□ 3.06
FGFR4-210ENST00000508139 BAZ1AQ9NRL2 1556 aaPredicted RBP34.15■■■■□ 3.06
FGFR4-210ENST00000508139 THOC2Q8NI27 1593 aaKnown RBP34.15■■■■□ 3.06
FGFR4-210ENST00000508139 PEG3Q9GZU2 1588 aa34.05■■■■□ 3.04
FGFR4-210ENST00000508139 KIF21AQ7Z4S6 1674 aa34.03■■■■□ 3.04
FGFR4-210ENST00000508139 LAMC3Q9Y6N6 1575 aa34.01■■■■□ 3.03
FGFR4-210ENST00000508139 MROH2BQ7Z745 1585 aa33.89■■■■□ 3.02
FGFR4-210ENST00000508139 PDS5BQ9NTI5 1447 aa33.73■■■□□ 2.99
FGFR4-210ENST00000508139 WIZO95785 1651 aa33.56■■■□□ 2.96
FGFR4-210ENST00000508139 MRC2Q9UBG0 1479 aa33.54■■■□□ 2.96
FGFR4-210ENST00000508139 CADPSQ9ULU8 1353 aa33.53■■■□□ 2.96
FGFR4-210ENST00000508139 WDR62O43379 1518 aa33.5■■■□□ 2.95
FGFR4-210ENST00000508139 TRIM41Q8WV44 630 aa33.47■■■□□ 2.95
FGFR4-210ENST00000508139 CEP164Q9UPV0 1460 aa33.33■■■□□ 2.93
FGFR4-210ENST00000508139 FANCD2Q9BXW9 1451 aa33.24■■■□□ 2.91
FGFR4-210ENST00000508139 CFTRP13569 1480 aa33.09■■■□□ 2.89
FGFR4-210ENST00000508139 PRDM2Q13029 1718 aa33.03■■■□□ 2.88
FGFR4-210ENST00000508139 TOP2AP11388 1531 aaKnown RBP33.02■■■□□ 2.88
FGFR4-210ENST00000508139 URB2Q14146 1524 aaKnown RBP33.02■■■□□ 2.88
FGFR4-210ENST00000508139 RSF1Q96T23 1441 aaPredicted RBP32.94■■■□□ 2.86
FGFR4-210ENST00000508139 OSCARQ8IYS5 282 aa32.93■■■□□ 2.86
FGFR4-210ENST00000508139 RIMBP3CA6NJZ7 1639 aa32.78■■■□□ 2.84
FGFR4-210ENST00000508139 RIMBP3BA6NNM3 1639 aa32.78■■■□□ 2.84
FGFR4-210ENST00000508139 RIMBP3Q9UFD9 1639 aa32.78■■■□□ 2.84
FGFR4-210ENST00000508139 ZNF608Q9ULD9 1512 aaPredicted RBP32.68■■■□□ 2.82
FGFR4-210ENST00000508139 IFT140Q96RY7 1462 aa32.63■■■□□ 2.81
FGFR4-210ENST00000508139 CCDC88BA6NC98 1476 aa32.6■■■□□ 2.81
FGFR4-210ENST00000508139 EIF4G3O43432 1585 aaKnown RBP32.58■■■□□ 2.81
FGFR4-210ENST00000508139 TOPBP1Q92547 1522 aa32.58■■■□□ 2.81
FGFR4-210ENST00000508139 ARHGEF11O15085 1522 aa32.56■■■□□ 2.8
FGFR4-210ENST00000508139 CHD1O14646 1710 aa32.51■■■□□ 2.8
FGFR4-210ENST00000508139 DNMBPQ6XZF7 1577 aa32.45■■■□□ 2.79
FGFR4-210ENST00000508139 ABCC8Q09428 1581 aa32.4■■■□□ 2.78
FGFR4-210ENST00000508139 TARBP1Q13395 1621 aaKnown RBP32.37■■■□□ 2.77
FGFR4-210ENST00000508139 AQRO60306 1485 aaKnown RBP eCLIP32.29■■■□□ 2.764e-7■■■■■ 39.6
FGFR4-210ENST00000508139 CYB5RLQ6IPT4 315 aa32.25■■■□□ 2.75
FGFR4-210ENST00000508139 POLA1P09884 1462 aaPredicted RBP32.21■■■□□ 2.75
FGFR4-210ENST00000508139 ARAP1Q96P48 1450 aa32.21■■■□□ 2.75
FGFR4-210ENST00000508139 FBLN2P98095 1184 aa32.16■■■□□ 2.74
FGFR4-210ENST00000508139 RAD54L2Q9Y4B4 1467 aa32.1■■■□□ 2.73
FGFR4-210ENST00000508139 TRHP20396 242 aaPredicted RBP32.06■■■□□ 2.72
FGFR4-210ENST00000508139 SNAPC4Q5SXM2 1469 aa32■■■□□ 2.71
FGFR4-210ENST00000508139 TDRD9Q8NDG6 1382 aaKnown RBP32■■■□□ 2.71
FGFR4-210ENST00000508139 SOGA1O94964 1423 aa32■■■□□ 2.71
FGFR4-210ENST00000508139 FGD5Q6ZNL6 1462 aa31.97■■■□□ 2.71
FGFR4-210ENST00000508139 WDR97A6NE52 1622 aa31.97■■■□□ 2.71
FGFR4-210ENST00000508139 CLASP1Q7Z460 1538 aa31.96■■■□□ 2.71
FGFR4-210ENST00000508139 SYNJ1O43426 1573 aa31.91■■■□□ 2.7
FGFR4-210ENST00000508139 CUX1P39880 1505 aa31.88■■■□□ 2.69
FGFR4-210ENST00000508139 PBRM1Q86U86 1689 aa31.87■■■□□ 2.69
FGFR4-210ENST00000508139 MAGI1Q96QZ7 1491 aaPredicted RBP31.85■■■□□ 2.69
FGFR4-210ENST00000508139 GRIN2BQ13224 1484 aa31.79■■■□□ 2.68
FGFR4-210ENST00000508139 CHMP7Q8WUX9 453 aaPredicted RBP31.79■■■□□ 2.68
FGFR4-210ENST00000508139 SYNJ2O15056 1496 aa31.75■■■□□ 2.67
FGFR4-210ENST00000508139 GAPVD1Q14C86 1478 aa31.64■■■□□ 2.66
FGFR4-210ENST00000508139 ABCA5Q8WWZ7 1642 aa31.64■■■□□ 2.65
FGFR4-210ENST00000508139 ABCA10Q8WWZ4 1543 aa31.53■■■□□ 2.64
FGFR4-210ENST00000508139 ERCC6L2Q5T890 1561 aa31.48■■■□□ 2.63
FGFR4-210ENST00000508139 AEBP2Q6ZN18 517 aaPredicted RBP31.44■■■□□ 2.62
FGFR4-210ENST00000508139 ADAMTS12P58397 1594 aa31.43■■■□□ 2.62
FGFR4-210ENST00000508139 GRIN2AQ12879 1464 aa31.41■■■□□ 2.62
FGFR4-210ENST00000508139 CEP170Q5SW79 1584 aa31.39■■■□□ 2.62
FGFR4-210ENST00000508139 BIVM-ERCC5R4GMW8 1640 aa31.32■■■□□ 2.6
FGFR4-210ENST00000508139 SHROOM2Q13796 1616 aa31.31■■■□□ 2.6
FGFR4-210ENST00000508139 NUP160Q12769 1436 aa31.28■■■□□ 2.6
FGFR4-210ENST00000508139 WRNQ14191 1432 aaPredicted RBP eCLIP31.28■■■□□ 2.6
FGFR4-210ENST00000508139 TOP2BQ02880 1626 aa31.26■■■□□ 2.59
FGFR4-210ENST00000508139 KIF13AQ9H1H9 1805 aa31.26■■■□□ 2.59
FGFR4-210ENST00000508139 SUPT5HO00267 1087 aaKnown RBP31.19■■■□□ 2.58
FGFR4-210ENST00000508139 FHAD1B1AJZ9 1412 aa31.18■■■□□ 2.58
FGFR4-210ENST00000508139 ERICH3Q5RHP9 1530 aa31.14■■■□□ 2.58
FGFR4-210ENST00000508139 PRG4Q92954 1404 aaPredicted RBP31.03■■■□□ 2.56
FGFR4-210ENST00000508139 RUSC2Q8N2Y8 1516 aa31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms