RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 KIF3BO15066 747 aa28.86■■■□□ 2.21
CLDND1-217ENST00000508071 TNRQ92752 1358 aa28.84■■■□□ 2.21
CLDND1-217ENST00000508071 POLR1AO95602 1720 aaPredicted RBP28.83■■■□□ 2.21
CLDND1-217ENST00000508071 KDM5DQ9BY66 1539 aa28.83■■■□□ 2.21
CLDND1-217ENST00000508071 RSPH4AQ5TD94 716 aa28.82■■■□□ 2.2
CLDND1-217ENST00000508071 CAMSAP2Q08AD1 1489 aa28.82■■■□□ 2.2
CLDND1-217ENST00000508071 FAM135AQ9P2D6 1515 aa28.82■■■□□ 2.2
CLDND1-217ENST00000508071 PZPP20742 1482 aa28.81■■■□□ 2.2
CLDND1-217ENST00000508071 NCOA2Q15596 1464 aa28.81■■■□□ 2.2
CLDND1-217ENST00000508071 FBXO31Q5XUX0 539 aaPredicted RBP28.81■■■□□ 2.2
CLDND1-217ENST00000508071 WASHC2CQ9Y4E1 1318 aa28.8■■■□□ 2.2
CLDND1-217ENST00000508071 NEURL4Q96JN8 1562 aa28.75■■■□□ 2.19
CLDND1-217ENST00000508071 CPS1P31327 1500 aa28.74■■■□□ 2.19
CLDND1-217ENST00000508071 ANKLE2Q86XL3 938 aa28.73■■■□□ 2.19
CLDND1-217ENST00000508071 SCAF1Q9H7N4 1312 aaKnown RBP28.72■■■□□ 2.19
CLDND1-217ENST00000508071 ARHGEF5Q12774 1597 aa28.72■■■□□ 2.19
CLDND1-217ENST00000508071 TSPY4P0CV99 314 aa28.72■■■□□ 2.19
CLDND1-217ENST00000508071 TSPY10P0CW01 314 aa28.72■■■□□ 2.19
CLDND1-217ENST00000508071 SHANK2Q9UPX8 1470 aa28.72■■■□□ 2.19
CLDND1-217ENST00000508071 MIA2Q96PC5 1412 aa28.71■■■□□ 2.19
CLDND1-217ENST00000508071 THEMISQ8N1K5 641 aaPredicted RBP28.71■■■□□ 2.19
CLDND1-217ENST00000508071 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.7■■■□□ 2.18
CLDND1-217ENST00000508071 NLRP1Q9C000 1473 aa28.7■■■□□ 2.18
CLDND1-217ENST00000508071 TOM1O60784 492 aa28.69■■■□□ 2.18
CLDND1-217ENST00000508071 UGGT1Q9NYU2 1555 aa28.68■■■□□ 2.18
CLDND1-217ENST00000508071 PIP4K2BP78356 416 aa28.68■■■□□ 2.18
CLDND1-217ENST00000508071 HSPA1LP34931 641 aa28.64■■■□□ 2.18
CLDND1-217ENST00000508071 NPHP4O75161 1426 aaPredicted RBP28.63■■■□□ 2.17
CLDND1-217ENST00000508071 DEPDC5O75140 1603 aa28.63■■■□□ 2.17
CLDND1-217ENST00000508071 VWDEQ8N2E2 1590 aa28.62■■■□□ 2.17
CLDND1-217ENST00000508071 RNF17Q9BXT8 1623 aaKnown RBP28.61■■■□□ 2.17
CLDND1-217ENST00000508071 MED14O60244 1454 aa28.61■■■□□ 2.17
CLDND1-217ENST00000508071 ZC3H13Q5T200 1668 aaKnown RBP28.6■■■□□ 2.17
CLDND1-217ENST00000508071 ABCC3O15438 1527 aa28.59■■■□□ 2.17
CLDND1-217ENST00000508071 MAST1Q9Y2H9 1570 aa28.58■■■□□ 2.17
CLDND1-217ENST00000508071 LRRC9Q6ZRR7 1453 aa28.58■■■□□ 2.17
CLDND1-217ENST00000508071 IQGAP1P46940 1657 aa28.58■■■□□ 2.16
CLDND1-217ENST00000508071 MED1Q15648 1581 aaPredicted RBP28.56■■■□□ 2.16
CLDND1-217ENST00000508071 EIF2AK4Q9P2K8 1649 aaKnown RBP28.56■■■□□ 2.16
CLDND1-217ENST00000508071 VPS8Q8N3P4 1428 aa28.53■■■□□ 2.16
CLDND1-217ENST00000508071 ERVK-7P63135 1459 aa28.52■■■□□ 2.16
CLDND1-217ENST00000508071 CFAP65Q6ZU64 1925 aaKnown RBP28.51■■■□□ 2.15
CLDND1-217ENST00000508071 CEP152O94986 1710 aa28.49■■■□□ 2.15
CLDND1-217ENST00000508071 MROH1Q8NDA8 1641 aa28.47■■■□□ 2.15
CLDND1-217ENST00000508071 STRCP1A6NGW2 1772 aa28.47■■■□□ 2.15
CLDND1-217ENST00000508071 ALKQ9UM73 1620 aa28.47■■■□□ 2.15
CLDND1-217ENST00000508071 MYOM3Q5VTT5 1437 aa28.45■■■□□ 2.15
CLDND1-217ENST00000508071 DUOX2Q9NRD8 1548 aa28.44■■■□□ 2.14
CLDND1-217ENST00000508071 UBR1Q8IWV7 1749 aa28.44■■■□□ 2.14
CLDND1-217ENST00000508071 KANK4Q5T7N3 995 aaPredicted RBP28.44■■■□□ 2.14
CLDND1-217ENST00000508071 SYNMO15061 1565 aa28.44■■■□□ 2.14
CLDND1-217ENST00000508071 MAP3K1Q13233 1512 aa28.43■■■□□ 2.14
CLDND1-217ENST00000508071 LRRC7Q96NW7 1537 aa28.43■■■□□ 2.14
CLDND1-217ENST00000508071 PHF23Q9BUL5 403 aaPredicted RBP28.41■■■□□ 2.14
CLDND1-217ENST00000508071 SCAF11Q99590 1463 aaKnown RBP28.4■■■□□ 2.14
CLDND1-217ENST00000508071 LOC105371045A0A1W2PR82 267 aa28.37■■■□□ 2.13
CLDND1-217ENST00000508071 SENP3Q9H4L4 574 aaPredicted RBP28.37■■■□□ 2.13
CLDND1-217ENST00000508071 KIF15Q9NS87 1388 aa28.36■■■□□ 2.13
CLDND1-217ENST00000508071 ARHGAP31Q2M1Z3 1444 aa28.35■■■□□ 2.13
CLDND1-217ENST00000508071 PRDM15P57071 1507 aaPredicted RBP28.34■■■□□ 2.13
CLDND1-217ENST00000508071 TXNDC2Q86VQ3 553 aa28.34■■■□□ 2.13
CLDND1-217ENST00000508071 SLIT1O75093 1534 aa28.33■■■□□ 2.13
CLDND1-217ENST00000508071 LTKP29376 864 aa28.33■■■□□ 2.13
CLDND1-217ENST00000508071 ERBINQ96RT1 1412 aa28.33■■■□□ 2.13
CLDND1-217ENST00000508071 ARHGAP23Q9P227 1491 aa28.33■■■□□ 2.13
CLDND1-217ENST00000508071 CROCC2H7BZ55 1655 aa28.32■■■□□ 2.12
CLDND1-217ENST00000508071 RRP7BPQ9NSQ0 103 aa28.31■■■□□ 2.12
CLDND1-217ENST00000508071 EID1Q9Y6B2 187 aa28.31■■■□□ 2.12
CLDND1-217ENST00000508071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.3■■■□□ 2.12
CLDND1-217ENST00000508071 ABCC5O15440 1437 aa28.29■■■□□ 2.12
CLDND1-217ENST00000508071 PTPN23Q9H3S7 1636 aa28.28■■■□□ 2.12
CLDND1-217ENST00000508071 PIK3C2BO00750 1634 aa28.27■■■□□ 2.12
CLDND1-217ENST00000508071 KANK1Q14678 1352 aa28.26■■■□□ 2.12
CLDND1-217ENST00000508071 STAG3Q9UJ98 1225 aa28.26■■■□□ 2.11
CLDND1-217ENST00000508071 APLP2Q06481 763 aa28.24■■■□□ 2.11
CLDND1-217ENST00000508071 XIRP1Q702N8 1843 aaKnown RBP28.24■■■□□ 2.11
CLDND1-217ENST00000508071 DAPK1P53355 1430 aa28.23■■■□□ 2.11
CLDND1-217ENST00000508071 TMEM2Q9UHN6 1383 aa28.23■■■□□ 2.11
CLDND1-217ENST00000508071 KDM5AP29375 1690 aaKnown RBP28.19■■■□□ 2.1
CLDND1-217ENST00000508071 EFCAB6Q5THR3 1501 aa28.18■■■□□ 2.1
CLDND1-217ENST00000508071 ANKRD30AQ9BXX3 1397 aa28.16■■■□□ 2.1
CLDND1-217ENST00000508071 LMTK2Q8IWU2 1503 aa28.16■■■□□ 2.1
CLDND1-217ENST00000508071 FGD6Q6ZV73 1430 aa28.16■■■□□ 2.1
CLDND1-217ENST00000508071 CHIC2Q9UKJ5 165 aa28.15■■■□□ 2.1
CLDND1-217ENST00000508071 IDI1Q13907 227 aa28.14■■■□□ 2.1
CLDND1-217ENST00000508071 TMEM94Q12767 1356 aa28.11■■■□□ 2.09
CLDND1-217ENST00000508071 FAM135BQ49AJ0 1406 aa28.11■■■□□ 2.09
CLDND1-217ENST00000508071 KCNA6P17658 529 aa28.11■■■□□ 2.09
CLDND1-217ENST00000508071 PROSER2Q86WR7 435 aaPredicted RBP28.08■■■□□ 2.09
CLDND1-217ENST00000508071 SLC26A8Q96RN1 970 aa28.08■■■□□ 2.09
CLDND1-217ENST00000508071 TET3O43151 1660 aa28.07■■■□□ 2.08
CLDND1-217ENST00000508071 NOS1P29475 1434 aa28.07■■■□□ 2.08
CLDND1-217ENST00000508071 ADGRB3O60242 1522 aa28.07■■■□□ 2.08
CLDND1-217ENST00000508071 RGS17Q9UGC6 210 aaPredicted RBP28.06■■■□□ 2.08
CLDND1-217ENST00000508071 SLC52A1Q9NWF4 448 aa28.04■■■□□ 2.08
CLDND1-217ENST00000508071 ROBO1Q9Y6N7 1651 aa28.03■■■□□ 2.08
CLDND1-217ENST00000508071 BCANQ96GW7 911 aa28.03■■■□□ 2.08
CLDND1-217ENST00000508071 RBM33Q96EV2 1170 aaKnown RBP28.02■■■□□ 2.08
CLDND1-217ENST00000508071 NKTRP30414 1462 aaKnown RBP28.01■■■□□ 2.07
CLDND1-217ENST00000508071 NWD1Q149M9 1564 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms