RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 NISCHQ9Y2I1 1504 aa45.47■■■■■ 4.87
CLDND1-217ENST00000508071 ABCC9O60706 1549 aa41.26■■■■■ 4.2
CLDND1-217ENST00000508071 CCDC180Q9P1Z9 1646 aa40.96■■■■■ 4.15
CLDND1-217ENST00000508071 RB1CC1Q8TDY2 1594 aa39.16■■■■□ 3.86
CLDND1-217ENST00000508071 DNAJC5BQ9UF47 199 aa38.93■■■■□ 3.82
CLDND1-217ENST00000508071 NACADO15069 1562 aa38.8■■■■□ 3.8
CLDND1-217ENST00000508071 DCAF8L2P0C7V8 631 aa38.57■■■■□ 3.76
CLDND1-217ENST00000508071 PABPN1Q86U42 306 aaKnown RBP eCLIP38.36■■■■□ 3.73
CLDND1-217ENST00000508071 UNC13AQ9UPW8 1703 aa38.26■■■■□ 3.71
CLDND1-217ENST00000508071 MYO15BQ96JP2 1530 aa38.13■■■■□ 3.69
CLDND1-217ENST00000508071 BICRAQ9NZM4 1560 aa37.97■■■■□ 3.67
CLDND1-217ENST00000508071 ZCCHC6Q5VYS8 1495 aaKnown RBP37.61■■■■□ 3.61
CLDND1-217ENST00000508071 DCAF1Q9Y4B6 1507 aa37.54■■■■□ 3.6
CLDND1-217ENST00000508071 SHROOM4Q9ULL8 1493 aa37.46■■■■□ 3.59
CLDND1-217ENST00000508071 SCRIBQ14160 1630 aa37.31■■■■□ 3.56
CLDND1-217ENST00000508071 CC2D2AQ9P2K1 1620 aa37.25■■■■□ 3.55
CLDND1-217ENST00000508071 CECR2Q9BXF3 1484 aa37.2■■■■□ 3.55
CLDND1-217ENST00000508071 EIF4G1Q04637 1599 aaKnown RBP37.09■■■■□ 3.53
CLDND1-217ENST00000508071 DNAJC5Q9H3Z4 198 aa36.01■■■■□ 3.36
CLDND1-217ENST00000508071 NCAPD3P42695 1498 aa35.8■■■■□ 3.32
CLDND1-217ENST00000508071 CUX2O14529 1486 aa35.69■■■■□ 3.3
CLDND1-217ENST00000508071 ERCC6Q03468 1493 aa35.68■■■■□ 3.3
CLDND1-217ENST00000508071 ATAD2BQ9ULI0 1458 aa35.66■■■■□ 3.3
CLDND1-217ENST00000508071 SMARCA2P51531 1590 aa35.56■■■■□ 3.28
CLDND1-217ENST00000508071 SMARCA4P51532 1647 aa35.54■■■■□ 3.28
CLDND1-217ENST00000508071 HMGXB3Q12766 1538 aa35.52■■■■□ 3.28
CLDND1-217ENST00000508071 BAZ1AQ9NRL2 1556 aaPredicted RBP35.34■■■■□ 3.25
CLDND1-217ENST00000508071 NESP48681 1621 aa35.33■■■■□ 3.25
CLDND1-217ENST00000508071 BAZ1BQ9UIG0 1483 aaKnown RBP35.32■■■■□ 3.24
CLDND1-217ENST00000508071 PEG3Q9GZU2 1588 aa35.19■■■■□ 3.22
CLDND1-217ENST00000508071 LAMC3Q9Y6N6 1575 aa35.07■■■■□ 3.2
CLDND1-217ENST00000508071 THOC2Q8NI27 1593 aaKnown RBP35.05■■■■□ 3.2
CLDND1-217ENST00000508071 MROH2BQ7Z745 1585 aa35.02■■■■□ 3.2
CLDND1-217ENST00000508071 KIF21AQ7Z4S6 1674 aa34.9■■■■□ 3.18
CLDND1-217ENST00000508071 PDS5BQ9NTI5 1447 aa34.89■■■■□ 3.18
CLDND1-217ENST00000508071 CADPSQ9ULU8 1353 aa34.71■■■■□ 3.15
CLDND1-217ENST00000508071 WIZO95785 1651 aa34.6■■■■□ 3.13
CLDND1-217ENST00000508071 MRC2Q9UBG0 1479 aa34.59■■■■□ 3.13
CLDND1-217ENST00000508071 WDR62O43379 1518 aa34.5■■■■□ 3.11
CLDND1-217ENST00000508071 CEP164Q9UPV0 1460 aa34.4■■■■□ 3.1
CLDND1-217ENST00000508071 TRIM41Q8WV44 630 aa34.35■■■■□ 3.09
CLDND1-217ENST00000508071 FANCD2Q9BXW9 1451 aa34.33■■■■□ 3.09
CLDND1-217ENST00000508071 CFTRP13569 1480 aa34.24■■■■□ 3.07
CLDND1-217ENST00000508071 RSF1Q96T23 1441 aaPredicted RBP34.19■■■■□ 3.06
CLDND1-217ENST00000508071 TOP2AP11388 1531 aaKnown RBP34.15■■■■□ 3.06
CLDND1-217ENST00000508071 URB2Q14146 1524 aaKnown RBP34.04■■■■□ 3.04
CLDND1-217ENST00000508071 OSCARQ8IYS5 282 aa34.02■■■■□ 3.04
CLDND1-217ENST00000508071 PRDM2Q13029 1718 aa33.92■■■■□ 3.02
CLDND1-217ENST00000508071 CCDC88BA6NC98 1476 aa33.76■■■■□ 3
CLDND1-217ENST00000508071 IFT140Q96RY7 1462 aa33.72■■■□□ 2.99
CLDND1-217ENST00000508071 ZNF608Q9ULD9 1512 aaPredicted RBP33.68■■■□□ 2.98
CLDND1-217ENST00000508071 TOPBP1Q92547 1522 aa33.63■■■□□ 2.97
CLDND1-217ENST00000508071 RIMBP3CA6NJZ7 1639 aa33.61■■■□□ 2.97
CLDND1-217ENST00000508071 RIMBP3BA6NNM3 1639 aa33.61■■■□□ 2.97
CLDND1-217ENST00000508071 RIMBP3Q9UFD9 1639 aa33.61■■■□□ 2.97
CLDND1-217ENST00000508071 ABCC8Q09428 1581 aa33.57■■■□□ 2.96
CLDND1-217ENST00000508071 EIF4G3O43432 1585 aaKnown RBP33.49■■■□□ 2.95
CLDND1-217ENST00000508071 DNMBPQ6XZF7 1577 aa33.49■■■□□ 2.95
CLDND1-217ENST00000508071 ARHGEF11O15085 1522 aa33.46■■■□□ 2.95
CLDND1-217ENST00000508071 TARBP1Q13395 1621 aaKnown RBP33.35■■■□□ 2.93
CLDND1-217ENST00000508071 AQRO60306 1485 aaKnown RBP eCLIP33.34■■■□□ 2.93
CLDND1-217ENST00000508071 CHD1O14646 1710 aa33.32■■■□□ 2.92
CLDND1-217ENST00000508071 POLA1P09884 1462 aaPredicted RBP33.26■■■□□ 2.92
CLDND1-217ENST00000508071 CYB5RLQ6IPT4 315 aa33.25■■■□□ 2.91
CLDND1-217ENST00000508071 FBLN2P98095 1184 aa33.23■■■□□ 2.91
CLDND1-217ENST00000508071 RAD54L2Q9Y4B4 1467 aa33.15■■■□□ 2.9
CLDND1-217ENST00000508071 SOGA1O94964 1423 aa33.12■■■□□ 2.89
CLDND1-217ENST00000508071 ARAP1Q96P48 1450 aa33.1■■■□□ 2.89
CLDND1-217ENST00000508071 TDRD9Q8NDG6 1382 aaKnown RBP33.09■■■□□ 2.89
CLDND1-217ENST00000508071 FGD5Q6ZNL6 1462 aa33.02■■■□□ 2.88
CLDND1-217ENST00000508071 WDR97A6NE52 1622 aa33.02■■■□□ 2.88
CLDND1-217ENST00000508071 SNAPC4Q5SXM2 1469 aa33■■■□□ 2.87
CLDND1-217ENST00000508071 TRHP20396 242 aaPredicted RBP33■■■□□ 2.87
CLDND1-217ENST00000508071 CUX1P39880 1505 aa32.93■■■□□ 2.86
CLDND1-217ENST00000508071 CHMP7Q8WUX9 453 aaPredicted RBP32.92■■■□□ 2.86
CLDND1-217ENST00000508071 MAGI1Q96QZ7 1491 aaPredicted RBP32.91■■■□□ 2.86
CLDND1-217ENST00000508071 CLASP1Q7Z460 1538 aa32.9■■■□□ 2.86
CLDND1-217ENST00000508071 SYNJ1O43426 1573 aa32.89■■■□□ 2.86
CLDND1-217ENST00000508071 GRIN2BQ13224 1484 aa32.87■■■□□ 2.85
CLDND1-217ENST00000508071 SYNJ2O15056 1496 aa32.8■■■□□ 2.84
CLDND1-217ENST00000508071 PBRM1Q86U86 1689 aa32.74■■■□□ 2.83
CLDND1-217ENST00000508071 GAPVD1Q14C86 1478 aa32.72■■■□□ 2.83
CLDND1-217ENST00000508071 ABCA10Q8WWZ4 1543 aa32.63■■■□□ 2.81
CLDND1-217ENST00000508071 ABCA5Q8WWZ7 1642 aa32.61■■■□□ 2.81
CLDND1-217ENST00000508071 SUPT5HO00267 1087 aaKnown RBP32.49■■■□□ 2.79
CLDND1-217ENST00000508071 WRNQ14191 1432 aaPredicted RBP eCLIP32.45■■■□□ 2.79
CLDND1-217ENST00000508071 GRIN2AQ12879 1464 aa32.44■■■□□ 2.78
CLDND1-217ENST00000508071 ADAMTS12P58397 1594 aa32.39■■■□□ 2.78
CLDND1-217ENST00000508071 ERCC6L2Q5T890 1561 aa32.36■■■□□ 2.77
CLDND1-217ENST00000508071 BIVM-ERCC5R4GMW8 1640 aa32.34■■■□□ 2.77
CLDND1-217ENST00000508071 NUP160Q12769 1436 aa32.34■■■□□ 2.77
CLDND1-217ENST00000508071 TOP2BQ02880 1626 aa32.33■■■□□ 2.77
CLDND1-217ENST00000508071 CEP170Q5SW79 1584 aa32.33■■■□□ 2.77
CLDND1-217ENST00000508071 AEBP2Q6ZN18 517 aaPredicted RBP32.3■■■□□ 2.76
CLDND1-217ENST00000508071 FHAD1B1AJZ9 1412 aa32.29■■■□□ 2.76
CLDND1-217ENST00000508071 SHROOM2Q13796 1616 aa32.23■■■□□ 2.75
CLDND1-217ENST00000508071 ERICH3Q5RHP9 1530 aa32.22■■■□□ 2.75
CLDND1-217ENST00000508071 PRG4Q92954 1404 aaPredicted RBP32.07■■■□□ 2.72
CLDND1-217ENST00000508071 JPH4Q96JJ6 628 aa32.02■■■□□ 2.72
CLDND1-217ENST00000508071 KIF13AQ9H1H9 1805 aa31.99■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms