RNA–Protein interactions for RNA: ENST00000507723.1

TMED9-204, Transcript of transmembrane p24 trafficking protein 9, humanhuman

TSL 2

Gene TMED9, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-204ENST00000507723 TNRQ92752 1358 aa22.92■■□□□ 1.26
TMED9-204ENST00000507723 RSPH4AQ5TD94 716 aa22.92■■□□□ 1.26
TMED9-204ENST00000507723 DNMT1P26358 1616 aaKnown RBP22.9■■□□□ 1.26
TMED9-204ENST00000507723 KIF3BO15066 747 aa22.9■■□□□ 1.26
TMED9-204ENST00000507723 CPS1P31327 1500 aa22.89■■□□□ 1.26
TMED9-204ENST00000507723 TOM1O60784 492 aa22.89■■□□□ 1.25
TMED9-204ENST00000507723 KDM5DQ9BY66 1539 aa22.88■■□□□ 1.25
TMED9-204ENST00000507723 PZPP20742 1482 aa22.88■■□□□ 1.25
TMED9-204ENST00000507723 CCDC141Q6ZP82 1450 aa22.88■■□□□ 1.25
TMED9-204ENST00000507723 SCAF1Q9H7N4 1312 aaKnown RBP22.87■■□□□ 1.25
TMED9-204ENST00000507723 WASHC2CQ9Y4E1 1318 aa22.87■■□□□ 1.25
TMED9-204ENST00000507723 ANKLE2Q86XL3 938 aa22.86■■□□□ 1.25
TMED9-204ENST00000507723 THEMISQ8N1K5 641 aaPredicted RBP22.86■■□□□ 1.25
TMED9-204ENST00000507723 FBXO31Q5XUX0 539 aaPredicted RBP22.84■■□□□ 1.25
TMED9-204ENST00000507723 SHANK2Q9UPX8 1470 aa22.84■■□□□ 1.25
TMED9-204ENST00000507723 POLR1AO95602 1720 aaPredicted RBP22.83■■□□□ 1.25
TMED9-204ENST00000507723 NLRP1Q9C000 1473 aa22.83■■□□□ 1.25
TMED9-204ENST00000507723 TSPY4P0CV99 314 aa22.82■■□□□ 1.24
TMED9-204ENST00000507723 TSPY10P0CW01 314 aa22.82■■□□□ 1.24
TMED9-204ENST00000507723 PIP4K2BP78356 416 aa22.82■■□□□ 1.24
TMED9-204ENST00000507723 CAMSAP2Q08AD1 1489 aa22.81■■□□□ 1.24
TMED9-204ENST00000507723 MIA2Q96PC5 1412 aa22.81■■□□□ 1.24
TMED9-204ENST00000507723 NEURL4Q96JN8 1562 aa22.8■■□□□ 1.24
TMED9-204ENST00000507723 NCOA2Q15596 1464 aa22.79■■□□□ 1.24
TMED9-204ENST00000507723 HSPA1LP34931 641 aa22.79■■□□□ 1.24
TMED9-204ENST00000507723 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.78■■□□□ 1.243e-40■■■□□ 17.3
TMED9-204ENST00000507723 UGGT1Q9NYU2 1555 aa22.77■■□□□ 1.24
TMED9-204ENST00000507723 NPHP4O75161 1426 aaPredicted RBP22.75■■□□□ 1.23
TMED9-204ENST00000507723 MED14O60244 1454 aa22.75■■□□□ 1.23
TMED9-204ENST00000507723 ARHGEF5Q12774 1597 aa22.74■■□□□ 1.23
TMED9-204ENST00000507723 DEPDC5O75140 1603 aa22.74■■□□□ 1.23
TMED9-204ENST00000507723 MED1Q15648 1581 aaPredicted RBP22.72■■□□□ 1.23
TMED9-204ENST00000507723 VWDEQ8N2E2 1590 aa22.71■■□□□ 1.23
TMED9-204ENST00000507723 PHF23Q9BUL5 403 aaPredicted RBP22.69■■□□□ 1.22
TMED9-204ENST00000507723 ZC3H13Q5T200 1668 aaKnown RBP22.67■■□□□ 1.22
TMED9-204ENST00000507723 IQGAP1P46940 1657 aa22.65■■□□□ 1.22
TMED9-204ENST00000507723 RNF17Q9BXT8 1623 aaKnown RBP22.65■■□□□ 1.22
TMED9-204ENST00000507723 ABCC3O15438 1527 aa22.65■■□□□ 1.22
TMED9-204ENST00000507723 MAST1Q9Y2H9 1570 aa22.63■■□□□ 1.21
TMED9-204ENST00000507723 EIF2AK4Q9P2K8 1649 aaKnown RBP22.63■■□□□ 1.21
TMED9-204ENST00000507723 ERVK-7P63135 1459 aa22.62■■□□□ 1.21
TMED9-204ENST00000507723 SYNMO15061 1565 aa22.61■■□□□ 1.21
TMED9-204ENST00000507723 LRRC9Q6ZRR7 1453 aa22.6■■□□□ 1.21
TMED9-204ENST00000507723 LRRC7Q96NW7 1537 aa22.59■■□□□ 1.21
TMED9-204ENST00000507723 VPS8Q8N3P4 1428 aa22.57■■□□□ 1.2
TMED9-204ENST00000507723 SCAF11Q99590 1463 aaKnown RBP22.56■■□□□ 1.2
TMED9-204ENST00000507723 ALKQ9UM73 1620 aa22.56■■□□□ 1.2
TMED9-204ENST00000507723 MYOM3Q5VTT5 1437 aa22.56■■□□□ 1.2
TMED9-204ENST00000507723 DUOX2Q9NRD8 1548 aa22.55■■□□□ 1.2
TMED9-204ENST00000507723 EID1Q9Y6B2 187 aa22.54■■□□□ 1.2
TMED9-204ENST00000507723 TXNDC2Q86VQ3 553 aa22.52■■□□□ 1.2
TMED9-204ENST00000507723 MAP3K1Q13233 1512 aa22.52■■□□□ 1.19
TMED9-204ENST00000507723 ARHGAP31Q2M1Z3 1444 aa22.51■■□□□ 1.19
TMED9-204ENST00000507723 MROH1Q8NDA8 1641 aa22.51■■□□□ 1.19
TMED9-204ENST00000507723 UBR1Q8IWV7 1749 aa22.51■■□□□ 1.19
TMED9-204ENST00000507723 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
TMED9-204ENST00000507723 SLIT1O75093 1534 aa22.5■■□□□ 1.19
TMED9-204ENST00000507723 KIF15Q9NS87 1388 aa22.49■■□□□ 1.19
TMED9-204ENST00000507723 ARHGAP23Q9P227 1491 aa22.48■■□□□ 1.19
TMED9-204ENST00000507723 STRCP1A6NGW2 1772 aa22.48■■□□□ 1.19
TMED9-204ENST00000507723 CEP152O94986 1710 aa22.48■■□□□ 1.19
TMED9-204ENST00000507723 ERBINQ96RT1 1412 aa22.48■■□□□ 1.19
TMED9-204ENST00000507723 STAG3Q9UJ98 1225 aa22.47■■□□□ 1.19
TMED9-204ENST00000507723 KANK1Q14678 1352 aa22.47■■□□□ 1.19
TMED9-204ENST00000507723 PRDM15P57071 1507 aaPredicted RBP22.47■■□□□ 1.19
TMED9-204ENST00000507723 LTKP29376 864 aa22.46■■□□□ 1.19
TMED9-204ENST00000507723 KANK4Q5T7N3 995 aaPredicted RBP22.44■■□□□ 1.18
TMED9-204ENST00000507723 TMEM2Q9UHN6 1383 aa22.42■■□□□ 1.18
TMED9-204ENST00000507723 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.42■■□□□ 1.181e-10■□□□□ 10.8
TMED9-204ENST00000507723 RRP7BPQ9NSQ0 103 aa22.42■■□□□ 1.18
TMED9-204ENST00000507723 APLP2Q06481 763 aa22.4■■□□□ 1.18
TMED9-204ENST00000507723 FAM135BQ49AJ0 1406 aa22.4■■□□□ 1.18
TMED9-204ENST00000507723 CFAP65Q6ZU64 1925 aaKnown RBP22.39■■□□□ 1.18
TMED9-204ENST00000507723 ABCC5O15440 1437 aa22.39■■□□□ 1.17
TMED9-204ENST00000507723 EFCAB6Q5THR3 1501 aa22.36■■□□□ 1.17
TMED9-204ENST00000507723 PIK3C2BO00750 1634 aa22.35■■□□□ 1.17
TMED9-204ENST00000507723 KCNA6P17658 529 aa22.35■■□□□ 1.17
TMED9-204ENST00000507723 CROCC2H7BZ55 1655 aa22.35■■□□□ 1.17
TMED9-204ENST00000507723 KDM5AP29375 1690 aaKnown RBP22.35■■□□□ 1.17
TMED9-204ENST00000507723 TMEM94Q12767 1356 aa22.35■■□□□ 1.17
TMED9-204ENST00000507723 DAPK1P53355 1430 aa22.34■■□□□ 1.17
TMED9-204ENST00000507723 ANKRD30AQ9BXX3 1397 aa22.34■■□□□ 1.17
TMED9-204ENST00000507723 PTPN23Q9H3S7 1636 aa22.34■■□□□ 1.17
TMED9-204ENST00000507723 LMTK2Q8IWU2 1503 aa22.33■■□□□ 1.17
TMED9-204ENST00000507723 IDI1Q13907 227 aa22.32■■□□□ 1.16
TMED9-204ENST00000507723 PROSER2Q86WR7 435 aaPredicted RBP22.32■■□□□ 1.16
TMED9-204ENST00000507723 RGS17Q9UGC6 210 aaPredicted RBP22.3■■□□□ 1.16
TMED9-204ENST00000507723 XIRP1Q702N8 1843 aaKnown RBP22.29■■□□□ 1.16
TMED9-204ENST00000507723 SLC52A1Q9NWF4 448 aa22.29■■□□□ 1.16
TMED9-204ENST00000507723 NKTRP30414 1462 aaKnown RBP22.28■■□□□ 1.16
TMED9-204ENST00000507723 SLC26A8Q96RN1 970 aa22.28■■□□□ 1.16
TMED9-204ENST00000507723 FGD6Q6ZV73 1430 aa22.28■■□□□ 1.16
TMED9-204ENST00000507723 BCANQ96GW7 911 aa22.27■■□□□ 1.16
TMED9-204ENST00000507723 MSH6P52701 1360 aa22.26■■□□□ 1.15
TMED9-204ENST00000507723 ADGRB3O60242 1522 aa22.26■■□□□ 1.15
TMED9-204ENST00000507723 NOS1P29475 1434 aa22.25■■□□□ 1.15
TMED9-204ENST00000507723 HDGFP51858 240 aaKnown RBP22.25■■□□□ 1.15
TMED9-204ENST00000507723 CHIC2Q9UKJ5 165 aa22.25■■□□□ 1.15
TMED9-204ENST00000507723 TET3O43151 1660 aa22.25■■□□□ 1.15
TMED9-204ENST00000507723 ROBO1Q9Y6N7 1651 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms