RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 EHBP1L1Q8N3D4 1523 aa20.63■□□□□ 0.89
LMNA-218ENST00000502357 ALKQ9UM73 1620 aa20.63■□□□□ 0.89
LMNA-218ENST00000502357 PZPP20742 1482 aa20.62■□□□□ 0.89
LMNA-218ENST00000502357 POLR1AO95602 1720 aaPredicted RBP20.62■□□□□ 0.89
LMNA-218ENST00000502357 TNRQ92752 1358 aa20.6■□□□□ 0.89
LMNA-218ENST00000502357 FAM135AQ9P2D6 1515 aa20.6■□□□□ 0.89
LMNA-218ENST00000502357 VWDEQ8N2E2 1590 aa20.59■□□□□ 0.89
LMNA-218ENST00000502357 SHANK2Q9UPX8 1470 aa20.59■□□□□ 0.89
LMNA-218ENST00000502357 CPS1P31327 1500 aa20.58■□□□□ 0.89
LMNA-218ENST00000502357 KDM5DQ9BY66 1539 aa20.58■□□□□ 0.89
LMNA-218ENST00000502357 HSPA1LP34931 641 aa20.58■□□□□ 0.89
LMNA-218ENST00000502357 KIF3BO15066 747 aa20.57■□□□□ 0.88
LMNA-218ENST00000502357 MED14O60244 1454 aa20.56■□□□□ 0.88
LMNA-218ENST00000502357 CCDC141Q6ZP82 1450 aa20.56■□□□□ 0.88
LMNA-218ENST00000502357 MIA2Q96PC5 1412 aa20.55■□□□□ 0.88
LMNA-218ENST00000502357 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.55■□□□□ 0.88
LMNA-218ENST00000502357 CAMSAP2Q08AD1 1489 aa20.55■□□□□ 0.88
LMNA-218ENST00000502357 MED1Q15648 1581 aaPredicted RBP20.55■□□□□ 0.88
LMNA-218ENST00000502357 NCOA2Q15596 1464 aa20.54■□□□□ 0.88
LMNA-218ENST00000502357 DEPDC5O75140 1603 aa20.53■□□□□ 0.88
LMNA-218ENST00000502357 STRCP1A6NGW2 1772 aa20.51■□□□□ 0.87
LMNA-218ENST00000502357 NLRP1Q9C000 1473 aa20.51■□□□□ 0.87
LMNA-218ENST00000502357 ARHGEF5Q12774 1597 aa20.51■□□□□ 0.87
LMNA-218ENST00000502357 RSPH4AQ5TD94 716 aa20.5■□□□□ 0.87
LMNA-218ENST00000502357 UGGT1Q9NYU2 1555 aa20.5■□□□□ 0.87
LMNA-218ENST00000502357 WASHC2CQ9Y4E1 1318 aa20.5■□□□□ 0.87
LMNA-218ENST00000502357 TOM1O60784 492 aa20.49■□□□□ 0.87
LMNA-218ENST00000502357 ANKLE2Q86XL3 938 aa20.49■□□□□ 0.87
LMNA-218ENST00000502357 NPHP4O75161 1426 aaPredicted RBP20.49■□□□□ 0.87
LMNA-218ENST00000502357 PIP4K2BP78356 416 aa20.48■□□□□ 0.87
LMNA-218ENST00000502357 RNF17Q9BXT8 1623 aaKnown RBP20.48■□□□□ 0.87
LMNA-218ENST00000502357 THEMISQ8N1K5 641 aaPredicted RBP20.47■□□□□ 0.87
LMNA-218ENST00000502357 MROH1Q8NDA8 1641 aa20.45■□□□□ 0.87
LMNA-218ENST00000502357 ABCC3O15438 1527 aa20.45■□□□□ 0.86
LMNA-218ENST00000502357 IQGAP1P46940 1657 aa20.45■□□□□ 0.86
LMNA-218ENST00000502357 LRRC7Q96NW7 1537 aa20.44■□□□□ 0.86
LMNA-218ENST00000502357 MAST1Q9Y2H9 1570 aa20.44■□□□□ 0.86
LMNA-218ENST00000502357 ZC3H13Q5T200 1668 aaKnown RBP20.42■□□□□ 0.86
LMNA-218ENST00000502357 SCAF1Q9H7N4 1312 aaKnown RBP20.41■□□□□ 0.86
LMNA-218ENST00000502357 ERVK-7P63135 1459 aa20.41■□□□□ 0.86
LMNA-218ENST00000502357 EIF2AK4Q9P2K8 1649 aaKnown RBP20.38■□□□□ 0.85
LMNA-218ENST00000502357 UBR1Q8IWV7 1749 aa20.38■□□□□ 0.85
LMNA-218ENST00000502357 TSPY4P0CV99 314 aa20.37■□□□□ 0.85
LMNA-218ENST00000502357 TSPY10P0CW01 314 aa20.37■□□□□ 0.85
LMNA-218ENST00000502357 LRRC9Q6ZRR7 1453 aa20.37■□□□□ 0.85
LMNA-218ENST00000502357 ARHGAP23Q9P227 1491 aa20.36■□□□□ 0.85
LMNA-218ENST00000502357 SYNMO15061 1565 aa20.35■□□□□ 0.85
LMNA-218ENST00000502357 XIRP1Q702N8 1843 aaKnown RBP20.35■□□□□ 0.85
LMNA-218ENST00000502357 CEP152O94986 1710 aa20.34■□□□□ 0.85
LMNA-218ENST00000502357 LTKP29376 864 aa20.33■□□□□ 0.85
LMNA-218ENST00000502357 CFAP65Q6ZU64 1925 aaKnown RBP20.33■□□□□ 0.84
LMNA-218ENST00000502357 SLIT1O75093 1534 aa20.32■□□□□ 0.84
LMNA-218ENST00000502357 KANK4Q5T7N3 995 aaPredicted RBP20.32■□□□□ 0.84
LMNA-218ENST00000502357 RGS17Q9UGC6 210 aaPredicted RBP20.31■□□□□ 0.84
LMNA-218ENST00000502357 ARHGAP31Q2M1Z3 1444 aa20.3■□□□□ 0.84
LMNA-218ENST00000502357 SCAF11Q99590 1463 aaKnown RBP20.3■□□□□ 0.84
LMNA-218ENST00000502357 VPS8Q8N3P4 1428 aa20.28■□□□□ 0.84
LMNA-218ENST00000502357 PRDM15P57071 1507 aaPredicted RBP20.27■□□□□ 0.83
LMNA-218ENST00000502357 MAP3K1Q13233 1512 aa20.27■□□□□ 0.83
LMNA-218ENST00000502357 DUOX2Q9NRD8 1548 aa20.27■□□□□ 0.83
LMNA-218ENST00000502357 MYOM3Q5VTT5 1437 aa20.27■□□□□ 0.83
LMNA-218ENST00000502357 ABCC5O15440 1437 aa20.22■□□□□ 0.83
LMNA-218ENST00000502357 TXNDC2Q86VQ3 553 aa20.22■□□□□ 0.83
LMNA-218ENST00000502357 PIK3C2BO00750 1634 aa20.22■□□□□ 0.83
LMNA-218ENST00000502357 PHF23Q9BUL5 403 aaPredicted RBP20.21■□□□□ 0.83
LMNA-218ENST00000502357 TET3O43151 1660 aa20.2■□□□□ 0.82
LMNA-218ENST00000502357 SENP3Q9H4L4 574 aaPredicted RBP20.2■□□□□ 0.82
LMNA-218ENST00000502357 CROCC2H7BZ55 1655 aa20.19■□□□□ 0.82
LMNA-218ENST00000502357 FAM135BQ49AJ0 1406 aa20.19■□□□□ 0.82
LMNA-218ENST00000502357 ERBINQ96RT1 1412 aa20.19■□□□□ 0.82
LMNA-218ENST00000502357 KIF15Q9NS87 1388 aa20.19■□□□□ 0.82
LMNA-218ENST00000502357 TMEM2Q9UHN6 1383 aa20.19■□□□□ 0.82
LMNA-218ENST00000502357 KDM5AP29375 1690 aaKnown RBP20.17■□□□□ 0.82
LMNA-218ENST00000502357 LMTK2Q8IWU2 1503 aa20.17■□□□□ 0.82
LMNA-218ENST00000502357 LOC105371045A0A1W2PR82 267 aa20.15■□□□□ 0.82
LMNA-218ENST00000502357 IDI1Q13907 227 aa20.14■□□□□ 0.81
LMNA-218ENST00000502357 RRP7BPQ9NSQ0 103 aa20.14■□□□□ 0.81
LMNA-218ENST00000502357 TMEM94Q12767 1356 aa20.13■□□□□ 0.81
LMNA-218ENST00000502357 NOS1P29475 1434 aa20.12■□□□□ 0.81
LMNA-218ENST00000502357 PTPN23Q9H3S7 1636 aa20.12■□□□□ 0.81
LMNA-218ENST00000502357 EFCAB6Q5THR3 1501 aa20.12■□□□□ 0.81
LMNA-218ENST00000502357 DAPK1P53355 1430 aa20.11■□□□□ 0.81
LMNA-218ENST00000502357 KCNA6P17658 529 aa20.11■□□□□ 0.81
LMNA-218ENST00000502357 POTEAQ6S8J7 498 aa20.11■□□□□ 0.81
LMNA-218ENST00000502357 EID1Q9Y6B2 187 aa20.11■□□□□ 0.81
LMNA-218ENST00000502357 NWD1Q149M9 1564 aa20.09■□□□□ 0.81
LMNA-218ENST00000502357 ROBO1Q9Y6N7 1651 aa20.09■□□□□ 0.81
LMNA-218ENST00000502357 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.07■□□□□ 0.83e-10■■■□□ 17.2
LMNA-218ENST00000502357 RBM33Q96EV2 1170 aaKnown RBP20.06■□□□□ 0.8
LMNA-218ENST00000502357 SLC26A8Q96RN1 970 aa20.06■□□□□ 0.8
LMNA-218ENST00000502357 FGD6Q6ZV73 1430 aa20.04■□□□□ 0.8
LMNA-218ENST00000502357 ADGRB3O60242 1522 aa20.04■□□□□ 0.8
LMNA-218ENST00000502357 NKTRP30414 1462 aaKnown RBP20.03■□□□□ 0.8
LMNA-218ENST00000502357 ZFYVE9O95405 1425 aa20.02■□□□□ 0.8
LMNA-218ENST00000502357 KANK1Q14678 1352 aa20.02■□□□□ 0.8
LMNA-218ENST00000502357 PROSER2Q86WR7 435 aaPredicted RBP20.01■□□□□ 0.79
LMNA-218ENST00000502357 ADGRL2O95490 1459 aa20■□□□□ 0.79
LMNA-218ENST00000502357 CHD2O14647 1828 aaKnown RBP20■□□□□ 0.79
LMNA-218ENST00000502357 ANKRD30AQ9BXX3 1397 aa19.99■□□□□ 0.79
LMNA-218ENST00000502357 STAG3Q9UJ98 1225 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms