RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 TCOF1Q13428 1488 aaKnown RBP22.24■■□□□ 1.15
CLDND1-206ENST00000502299 PKD2Q13563 968 aa22.24■■□□□ 1.15
CLDND1-206ENST00000502299 CEP170BQ9Y4F5 1589 aaPredicted RBP22.24■■□□□ 1.15
CLDND1-206ENST00000502299 RTEL1-TNFRSF6BF6WH68 1400 aa22.23■■□□□ 1.15
CLDND1-206ENST00000502299 CCDC141Q6ZP82 1450 aa22.23■■□□□ 1.15
CLDND1-206ENST00000502299 ZNF142P52746 1687 aaPredicted RBP22.23■■□□□ 1.15
CLDND1-206ENST00000502299 ARHGEF5Q12774 1597 aa22.21■■□□□ 1.15
CLDND1-206ENST00000502299 SOCS7O14512 581 aa22.2■■□□□ 1.14
CLDND1-206ENST00000502299 DHX29Q7Z478 1369 aaKnown RBP22.2■■□□□ 1.14
CLDND1-206ENST00000502299 FGD6Q6ZV73 1430 aa22.2■■□□□ 1.14
CLDND1-206ENST00000502299 ADGBQ8N7X0 1667 aa22.2■■□□□ 1.14
CLDND1-206ENST00000502299 SPATA31D1Q6ZQQ2 1576 aa22.18■■□□□ 1.14
CLDND1-206ENST00000502299 PPARGC1BQ86YN6 1023 aaKnown RBP22.17■■□□□ 1.14
CLDND1-206ENST00000502299 PTPN23Q9H3S7 1636 aa22.17■■□□□ 1.14
CLDND1-206ENST00000502299 UBAP1LF5GYI3 381 aa22.16■■□□□ 1.14
CLDND1-206ENST00000502299 FBXO31Q5XUX0 539 aaPredicted RBP22.16■■□□□ 1.14
CLDND1-206ENST00000502299 A2ML1A8K2U0 1454 aa22.15■■□□□ 1.14
CLDND1-206ENST00000502299 KIF3BO15066 747 aa22.14■■□□□ 1.13
CLDND1-206ENST00000502299 DNMT1P26358 1616 aaKnown RBP22.13■■□□□ 1.13
CLDND1-206ENST00000502299 FAM50AQ14320 339 aaKnown RBP22.11■■□□□ 1.13
CLDND1-206ENST00000502299 TNRQ92752 1358 aa22.1■■□□□ 1.13
CLDND1-206ENST00000502299 ABCC5O15440 1437 aa22.09■■□□□ 1.13
CLDND1-206ENST00000502299 PZPP20742 1482 aa22.09■■□□□ 1.13
CLDND1-206ENST00000502299 MAST1Q9Y2H9 1570 aa22.08■■□□□ 1.13
CLDND1-206ENST00000502299 WASHC2CQ9Y4E1 1318 aa22.07■■□□□ 1.12
CLDND1-206ENST00000502299 DAPK1P53355 1430 aa22.06■■□□□ 1.12
CLDND1-206ENST00000502299 KDM5DQ9BY66 1539 aa22.06■■□□□ 1.12
CLDND1-206ENST00000502299 NEURL4Q96JN8 1562 aa22.05■■□□□ 1.12
CLDND1-206ENST00000502299 SHANK2Q9UPX8 1470 aa22.03■■□□□ 1.12
CLDND1-206ENST00000502299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.03■■□□□ 1.12
CLDND1-206ENST00000502299 FAM135AQ9P2D6 1515 aa22.03■■□□□ 1.12
CLDND1-206ENST00000502299 CHIC2Q9UKJ5 165 aa22.01■■□□□ 1.11
CLDND1-206ENST00000502299 ANKLE2Q86XL3 938 aa22■■□□□ 1.11
CLDND1-206ENST00000502299 RRP7BPQ9NSQ0 103 aa22■■□□□ 1.11
CLDND1-206ENST00000502299 ANKRD30AQ9BXX3 1397 aa21.99■■□□□ 1.11
CLDND1-206ENST00000502299 CPS1P31327 1500 aa21.98■■□□□ 1.11
CLDND1-206ENST00000502299 HSPA1LP34931 641 aa21.98■■□□□ 1.11
CLDND1-206ENST00000502299 THEMISQ8N1K5 641 aaPredicted RBP21.98■■□□□ 1.11
CLDND1-206ENST00000502299 CROCC2H7BZ55 1655 aa21.98■■□□□ 1.11
CLDND1-206ENST00000502299 NLRP1Q9C000 1473 aa21.97■■□□□ 1.11
CLDND1-206ENST00000502299 PIP4K2BP78356 416 aa21.97■■□□□ 1.11
CLDND1-206ENST00000502299 KIF15Q9NS87 1388 aa21.97■■□□□ 1.11
CLDND1-206ENST00000502299 POLR1AO95602 1720 aaPredicted RBP21.97■■□□□ 1.11
CLDND1-206ENST00000502299 SCAF1Q9H7N4 1312 aaKnown RBP21.96■■□□□ 1.11
CLDND1-206ENST00000502299 DUOX2Q9NRD8 1548 aa21.96■■□□□ 1.11
CLDND1-206ENST00000502299 UGGT1Q9NYU2 1555 aa21.95■■□□□ 1.11
CLDND1-206ENST00000502299 VWDEQ8N2E2 1590 aa21.95■■□□□ 1.1
CLDND1-206ENST00000502299 TOM1O60784 492 aa21.94■■□□□ 1.1
CLDND1-206ENST00000502299 NPHP4O75161 1426 aaPredicted RBP21.94■■□□□ 1.1
CLDND1-206ENST00000502299 MED14O60244 1454 aa21.94■■□□□ 1.1
CLDND1-206ENST00000502299 ABCC3O15438 1527 aa21.92■■□□□ 1.1
CLDND1-206ENST00000502299 ADGRL2O95490 1459 aa21.9■■□□□ 1.1
CLDND1-206ENST00000502299 RRBP1Q9P2E9 1410 aaKnown RBP21.9■■□□□ 1.1
CLDND1-206ENST00000502299 RNF17Q9BXT8 1623 aaKnown RBP21.9■■□□□ 1.1
CLDND1-206ENST00000502299 ERBINQ96RT1 1412 aa21.89■■□□□ 1.1
CLDND1-206ENST00000502299 DEPDC5O75140 1603 aa21.89■■□□□ 1.09
CLDND1-206ENST00000502299 EIF2AK4Q9P2K8 1649 aaKnown RBP21.89■■□□□ 1.09
CLDND1-206ENST00000502299 ITGAEP38570 1179 aa21.89■■□□□ 1.09
CLDND1-206ENST00000502299 ALKQ9UM73 1620 aa21.88■■□□□ 1.09
CLDND1-206ENST00000502299 ERVK-7P63135 1459 aa21.87■■□□□ 1.09
CLDND1-206ENST00000502299 MROH1Q8NDA8 1641 aa21.86■■□□□ 1.09
CLDND1-206ENST00000502299 ROCK1Q13464 1354 aa21.85■■□□□ 1.09
CLDND1-206ENST00000502299 MED1Q15648 1581 aaPredicted RBP21.84■■□□□ 1.09
CLDND1-206ENST00000502299 IQGAP1P46940 1657 aa21.83■■□□□ 1.09
CLDND1-206ENST00000502299 ZC3H13Q5T200 1668 aaKnown RBP21.83■■□□□ 1.09
CLDND1-206ENST00000502299 ANKRD50Q9ULJ7 1429 aa21.81■■□□□ 1.08
CLDND1-206ENST00000502299 LRRC7Q96NW7 1537 aa21.81■■□□□ 1.08
CLDND1-206ENST00000502299 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.81■■□□□ 1.08
CLDND1-206ENST00000502299 STRCP1A6NGW2 1772 aa21.8■■□□□ 1.08
CLDND1-206ENST00000502299 KANK1Q14678 1352 aa21.79■■□□□ 1.08
CLDND1-206ENST00000502299 LTKP29376 864 aa21.78■■□□□ 1.08
CLDND1-206ENST00000502299 SCAF11Q99590 1463 aaKnown RBP21.76■■□□□ 1.07
CLDND1-206ENST00000502299 CEP152O94986 1710 aa21.75■■□□□ 1.07
CLDND1-206ENST00000502299 UBR1Q8IWV7 1749 aa21.75■■□□□ 1.07
CLDND1-206ENST00000502299 ARHGAP31Q2M1Z3 1444 aa21.74■■□□□ 1.07
CLDND1-206ENST00000502299 SENP3Q9H4L4 574 aaPredicted RBP21.74■■□□□ 1.07
CLDND1-206ENST00000502299 ARHGAP23Q9P227 1491 aa21.74■■□□□ 1.07
CLDND1-206ENST00000502299 PRDM15P57071 1507 aaPredicted RBP21.74■■□□□ 1.07
CLDND1-206ENST00000502299 TXNDC2Q86VQ3 553 aa21.73■■□□□ 1.07
CLDND1-206ENST00000502299 SLIT1O75093 1534 aa21.72■■□□□ 1.07
CLDND1-206ENST00000502299 SYNMO15061 1565 aa21.71■■□□□ 1.07
CLDND1-206ENST00000502299 CFAP65Q6ZU64 1925 aaKnown RBP21.68■■□□□ 1.06
CLDND1-206ENST00000502299 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
CLDND1-206ENST00000502299 TMEM2Q9UHN6 1383 aa21.66■■□□□ 1.06
CLDND1-206ENST00000502299 EID1Q9Y6B2 187 aa21.66■■□□□ 1.06
CLDND1-206ENST00000502299 LMTK2Q8IWU2 1503 aa21.65■■□□□ 1.06
CLDND1-206ENST00000502299 PIK3C2BO00750 1634 aa21.63■■□□□ 1.05
CLDND1-206ENST00000502299 IDI1Q13907 227 aa21.63■■□□□ 1.05
CLDND1-206ENST00000502299 NAIPQ13075 1403 aa21.63■■□□□ 1.05
CLDND1-206ENST00000502299 NUP155O75694 1391 aa21.61■■□□□ 1.05
CLDND1-206ENST00000502299 UNC13BO14795 1591 aa21.61■■□□□ 1.05
CLDND1-206ENST00000502299 RGS17Q9UGC6 210 aaPredicted RBP21.6■■□□□ 1.05
CLDND1-206ENST00000502299 STAG3Q9UJ98 1225 aa21.6■■□□□ 1.05
CLDND1-206ENST00000502299 HFM1A2PYH4 1435 aa21.6■■□□□ 1.05
CLDND1-206ENST00000502299 XIRP1Q702N8 1843 aaKnown RBP21.59■■□□□ 1.05
CLDND1-206ENST00000502299 EFCAB6Q5THR3 1501 aa21.58■■□□□ 1.04
CLDND1-206ENST00000502299 TMEM94Q12767 1356 aa21.58■■□□□ 1.04
CLDND1-206ENST00000502299 KCNA6P17658 529 aa21.56■■□□□ 1.04
CLDND1-206ENST00000502299 SLC26A8Q96RN1 970 aa21.56■■□□□ 1.04
CLDND1-206ENST00000502299 NOS1P29475 1434 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms