RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
CLDND1-206ENST00000502299 ABCC9O60706 1549 aa31.65■■■□□ 2.66
CLDND1-206ENST00000502299 CCDC180Q9P1Z9 1646 aa31.32■■■□□ 2.6
CLDND1-206ENST00000502299 DNAJC5BQ9UF47 199 aa29.99■■■□□ 2.39
CLDND1-206ENST00000502299 RB1CC1Q8TDY2 1594 aa29.95■■■□□ 2.39
CLDND1-206ENST00000502299 NACADO15069 1562 aa29.71■■■□□ 2.35
CLDND1-206ENST00000502299 DCAF8L2P0C7V8 631 aa29.59■■■□□ 2.33
CLDND1-206ENST00000502299 PABPN1Q86U42 306 aaKnown RBP eCLIP29.48■■■□□ 2.31
CLDND1-206ENST00000502299 MYO15BQ96JP2 1530 aa29.25■■■□□ 2.27
CLDND1-206ENST00000502299 UNC13AQ9UPW8 1703 aa29.23■■■□□ 2.27
CLDND1-206ENST00000502299 BICRAQ9NZM4 1560 aa29.16■■■□□ 2.26
CLDND1-206ENST00000502299 ZCCHC6Q5VYS8 1495 aaKnown RBP28.88■■■□□ 2.21
CLDND1-206ENST00000502299 DCAF1Q9Y4B6 1507 aa28.79■■■□□ 2.2
CLDND1-206ENST00000502299 SHROOM4Q9ULL8 1493 aa28.67■■■□□ 2.18
CLDND1-206ENST00000502299 SCRIBQ14160 1630 aa28.58■■■□□ 2.17
CLDND1-206ENST00000502299 CC2D2AQ9P2K1 1620 aa28.54■■■□□ 2.16
CLDND1-206ENST00000502299 CECR2Q9BXF3 1484 aa28.53■■■□□ 2.16
CLDND1-206ENST00000502299 EIF4G1Q04637 1599 aaKnown RBP28.44■■■□□ 2.14
CLDND1-206ENST00000502299 DNAJC5Q9H3Z4 198 aa27.64■■■□□ 2.02
CLDND1-206ENST00000502299 NCAPD3P42695 1498 aa27.49■■□□□ 1.99
CLDND1-206ENST00000502299 ATAD2BQ9ULI0 1458 aa27.38■■□□□ 1.97
CLDND1-206ENST00000502299 CUX2O14529 1486 aa27.32■■□□□ 1.96
CLDND1-206ENST00000502299 ERCC6Q03468 1493 aa27.3■■□□□ 1.96
CLDND1-206ENST00000502299 SMARCA4P51532 1647 aa27.24■■□□□ 1.95
CLDND1-206ENST00000502299 SMARCA2P51531 1590 aa27.22■■□□□ 1.95
CLDND1-206ENST00000502299 HMGXB3Q12766 1538 aa27.21■■□□□ 1.95
CLDND1-206ENST00000502299 NESP48681 1621 aa27.15■■□□□ 1.94
CLDND1-206ENST00000502299 BAZ1AQ9NRL2 1556 aaPredicted RBP27.07■■□□□ 1.92
CLDND1-206ENST00000502299 BAZ1BQ9UIG0 1483 aaKnown RBP27.06■■□□□ 1.92
CLDND1-206ENST00000502299 PEG3Q9GZU2 1588 aa26.99■■□□□ 1.91
CLDND1-206ENST00000502299 MROH2BQ7Z745 1585 aa26.92■■□□□ 1.9
CLDND1-206ENST00000502299 THOC2Q8NI27 1593 aaKnown RBP26.85■■□□□ 1.89
CLDND1-206ENST00000502299 LAMC3Q9Y6N6 1575 aa26.84■■□□□ 1.89
CLDND1-206ENST00000502299 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
CLDND1-206ENST00000502299 KIF21AQ7Z4S6 1674 aa26.69■■□□□ 1.86
CLDND1-206ENST00000502299 CADPSQ9ULU8 1353 aa26.65■■□□□ 1.86
CLDND1-206ENST00000502299 WIZO95785 1651 aa26.54■■□□□ 1.84
CLDND1-206ENST00000502299 MRC2Q9UBG0 1479 aa26.51■■□□□ 1.83
CLDND1-206ENST00000502299 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
CLDND1-206ENST00000502299 WDR62O43379 1518 aa26.45■■□□□ 1.83
CLDND1-206ENST00000502299 CEP164Q9UPV0 1460 aa26.34■■□□□ 1.81
CLDND1-206ENST00000502299 FANCD2Q9BXW9 1451 aa26.32■■□□□ 1.8
CLDND1-206ENST00000502299 TRIM41Q8WV44 630 aa26.31■■□□□ 1.8
CLDND1-206ENST00000502299 CFTRP13569 1480 aa26.3■■□□□ 1.8
CLDND1-206ENST00000502299 TOP2AP11388 1531 aaKnown RBP26.19■■□□□ 1.78
CLDND1-206ENST00000502299 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.78
CLDND1-206ENST00000502299 OSCARQ8IYS5 282 aa26.09■■□□□ 1.77
CLDND1-206ENST00000502299 CCDC88BA6NC98 1476 aa25.94■■□□□ 1.74
CLDND1-206ENST00000502299 SUPT5HO00267 1087 aaKnown RBP25.88■■□□□ 1.73
CLDND1-206ENST00000502299 ZNF608Q9ULD9 1512 aaPredicted RBP25.88■■□□□ 1.73
CLDND1-206ENST00000502299 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
CLDND1-206ENST00000502299 PRDM2Q13029 1718 aa25.84■■□□□ 1.73
CLDND1-206ENST00000502299 TOPBP1Q92547 1522 aa25.8■■□□□ 1.72
CLDND1-206ENST00000502299 RIMBP3CA6NJZ7 1639 aa25.72■■□□□ 1.71
CLDND1-206ENST00000502299 RIMBP3BA6NNM3 1639 aa25.72■■□□□ 1.71
CLDND1-206ENST00000502299 RIMBP3Q9UFD9 1639 aa25.72■■□□□ 1.71
CLDND1-206ENST00000502299 ABCC8Q09428 1581 aa25.68■■□□□ 1.7
CLDND1-206ENST00000502299 DNMBPQ6XZF7 1577 aa25.65■■□□□ 1.7
CLDND1-206ENST00000502299 ARHGEF11O15085 1522 aa25.65■■□□□ 1.7
CLDND1-206ENST00000502299 EIF4G3O43432 1585 aaKnown RBP25.65■■□□□ 1.7
CLDND1-206ENST00000502299 AQRO60306 1485 aaKnown RBP eCLIP25.62■■□□□ 1.691e-6■■■■□ 26.1
CLDND1-206ENST00000502299 TARBP1Q13395 1621 aaKnown RBP25.58■■□□□ 1.69
CLDND1-206ENST00000502299 POLA1P09884 1462 aaPredicted RBP25.53■■□□□ 1.68
CLDND1-206ENST00000502299 CYB5RLQ6IPT4 315 aa25.51■■□□□ 1.67
CLDND1-206ENST00000502299 RAD54L2Q9Y4B4 1467 aa25.47■■□□□ 1.67
CLDND1-206ENST00000502299 FBLN2P98095 1184 aa25.47■■□□□ 1.67
CLDND1-206ENST00000502299 CHD1O14646 1710 aa25.46■■□□□ 1.67
CLDND1-206ENST00000502299 TDRD9Q8NDG6 1382 aaKnown RBP25.43■■□□□ 1.66
CLDND1-206ENST00000502299 SOGA1O94964 1423 aa25.42■■□□□ 1.66
CLDND1-206ENST00000502299 ARAP1Q96P48 1450 aa25.4■■□□□ 1.66
CLDND1-206ENST00000502299 FGD5Q6ZNL6 1462 aa25.34■■□□□ 1.65
CLDND1-206ENST00000502299 SNAPC4Q5SXM2 1469 aa25.31■■□□□ 1.64
CLDND1-206ENST00000502299 CUX1P39880 1505 aa25.28■■□□□ 1.64
CLDND1-206ENST00000502299 TRHP20396 242 aaPredicted RBP25.26■■□□□ 1.63
CLDND1-206ENST00000502299 CHMP7Q8WUX9 453 aaPredicted RBP25.24■■□□□ 1.63
CLDND1-206ENST00000502299 WDR97A6NE52 1622 aa25.23■■□□□ 1.63
CLDND1-206ENST00000502299 CLASP1Q7Z460 1538 aa25.23■■□□□ 1.63
CLDND1-206ENST00000502299 MAGI1Q96QZ7 1491 aaPredicted RBP25.21■■□□□ 1.63
CLDND1-206ENST00000502299 GRIN2BQ13224 1484 aa25.2■■□□□ 1.62
CLDND1-206ENST00000502299 SYNJ2O15056 1496 aa25.15■■□□□ 1.62
CLDND1-206ENST00000502299 SYNJ1O43426 1573 aa25.14■■□□□ 1.62
CLDND1-206ENST00000502299 GAPVD1Q14C86 1478 aa25.09■■□□□ 1.61
CLDND1-206ENST00000502299 ABCA10Q8WWZ4 1543 aa25.03■■□□□ 1.6
CLDND1-206ENST00000502299 PBRM1Q86U86 1689 aa25.01■■□□□ 1.59
CLDND1-206ENST00000502299 ABCA5Q8WWZ7 1642 aa24.98■■□□□ 1.59
CLDND1-206ENST00000502299 WRNQ14191 1432 aaPredicted RBP eCLIP24.96■■□□□ 1.59
CLDND1-206ENST00000502299 GRIN2AQ12879 1464 aa24.89■■□□□ 1.57
CLDND1-206ENST00000502299 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
CLDND1-206ENST00000502299 ERCC6L2Q5T890 1561 aa24.86■■□□□ 1.57
CLDND1-206ENST00000502299 BIVM-ERCC5R4GMW8 1640 aa24.84■■□□□ 1.57
CLDND1-206ENST00000502299 NUP160Q12769 1436 aa24.83■■□□□ 1.57
CLDND1-206ENST00000502299 ADAMTS12P58397 1594 aa24.82■■□□□ 1.56
CLDND1-206ENST00000502299 CEP170Q5SW79 1584 aa24.8■■□□□ 1.56
CLDND1-206ENST00000502299 FHAD1B1AJZ9 1412 aa24.77■■□□□ 1.56
CLDND1-206ENST00000502299 SHROOM2Q13796 1616 aa24.7■■□□□ 1.54
CLDND1-206ENST00000502299 ERICH3Q5RHP9 1530 aa24.69■■□□□ 1.54
CLDND1-206ENST00000502299 AEBP2Q6ZN18 517 aaPredicted RBP24.65■■□□□ 1.54
CLDND1-206ENST00000502299 PRG4Q92954 1404 aaPredicted RBP24.61■■□□□ 1.53
CLDND1-206ENST00000502299 JPH4Q96JJ6 628 aa24.59■■□□□ 1.53
CLDND1-206ENST00000502299 RUSC2Q8N2Y8 1516 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms